Ptra016211.1
Basic Information
- Insect
- Philereme transversata
- Gene Symbol
- clz9
- Assembly
- GCA_963924445.1
- Location
- OZ004344.1:27868550-27877397[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-11 1.7e-09 38.3 0.0 2 39 26 64 25 68 0.93 2 2 6.7 1.1e+03 0.5 0.0 17 37 727 747 724 752 0.83
Sequence Information
- Coding Sequence
- atggttcgTGAATACAAGAGAACGTATCGGCACGTAAGACTTGGAAAAACATTCTTACCTTATGTGTCTTATACCACAGAAGACCTAGAAAATGCTGTGCGTGAAGTGAGAGAAGGAGACAGTTCAGTCCGACAAGCAGCAACCAAATATAATATACCCAAAAGCACACTTGCCCGTAAATGTAAAAAAGACACGATTTATGAAAGTGCAGGTCGCCCTACTTTATTTAATGCTAATGAAGAGAATGCTTTTCTGTCATATTGCGAAGTATTAGGCGAGTGGGGTTTTCCATTAGATGCTTTCGATTTAAGAGTCTTAGCACAGAAATACTTAAACAGAATTGGGAGGACCGTTCACATCCTTAAAGATAATCTTCCAGGGCGTGACTGGGCTCTGAGTTTCATGAAACGACATAAAAATAGATTATCTCACAAATTTGCGACTAAAATTTCTACTGAGAGAGCAAAGGTGTCACCTGAAACAATTGATGCCTTTTTTGAGAATTATATAACCACTATTTCAGGAGTTCCTCCTGAAAACATAATAAATTTTGATGAAACTAATCTTTGTGATGATCCTGGAGCTAAGAAGTATGTATTCAAAAGAGGCACAAAGTACCCGAAAAAAGTCTTAAATAATTCGAAGACGGCAGTGAGCTTAATGTTTACCGGAACGGCAGATGGCCAAATGTTACCCATATACGTTGTGTACAAAGCAGAACGCGTATGGCAGCCATGGATAGAGGGCGGACCTCCCGACACTAGGTACAATAGGTCAAAATCCGGCTGGTTTGACATGACATGCTTTGAAGATTGGTTCGAAACAGTAATTGTTCCattcgcaaaaaaaaaaactggaaaAAAAGTCATTATTGGCGATAATTTATCGTCGCATTTTTCAGAGAAAATTCTAGAATCTTGCGAGTCACTAAACATTTCATTCGTCTGCTTGCCGTCCAAGTCCACACACTTGATGCAACCGTTAGATGTCGCCTTTTATGGGCCGTTAAAGAAATACTGGAAGAACATTCTAACAAACTGGAAAACGACAGCAGATGgtagaaaatataaaacaatggCAAAGTCTTGTTTTCCAAAGCTTCTAGCTCAATTATGTGATTTAATGATTGAGAAAGACGTGATATCAGCCAATTTAAAAGCGGGTTTTGAAAAGAGCGGTCTATTCCCTGTAAACCCTGAAAGACCGAAATCAAGACTACCAAGGGCACTGGTTACAGCTGCAGAAGTTAACCTAGCTACTTCTGAAGTTGTGATTGATATATTACAAGACATGAGAGGCTTTAAGGATACTGCTCCAAGCAAAAGAAGGAAGCGGTGCGATGTAGAACCAGGGAAAAGCATATGTGCAAAAGATTTAACTCCAAAACCAACAACGAGCACTAAAGGCAAAGGACAAGGAAAAAAAACCAAAACTcatgtaaacaaaaaaattacaacgtCATCTCAGAATATCAACAAAAGTAGGAATCCAACAAAAAAGAGACTGAACAAAGCTCAACATGATTTAGACGAATCAACCAGTGTGTCTGATAATATGAGCCAGCACAGTGATTCTGATTTGATGGATTTAGATTTGAGAAAAGAGTATGGCAGTGATGATACCAACTGTTCTGAAGAACAAGCTttttcgatatcctattttgAAAATAGAGTTCTATCCGCAGAGCCCGAACCAGGCCCTAGTGGAGAATCATCACGACGTCGTGCAGTGAAACCAAGACCAGAGCCTTGTGAGAATACATTGCCAGACTATGAAGAGGAGTTAATATTAGGTTCTAATGAAAAGGCAGCACGTAGTCGTAATGAGGCGTCAATGGCAAGCCCGAACGAAGAGGAGCTAGCACAAAAGCCAGGGTATGGCTCTAACCTGGAGTCAGTACAACACCATAGTGGTCAGCTAGCTCAGAACTGTGAGGAAGAGATAATAGCATGTCCACTAGCACAAGGCTCTAATGAGCAGCCAGCACCAGGCCCAATTAATCAGCTAGAACCAGAAAATAATGAGGAGGTAGCAGTGCAATGGTTTTCACTTAAAGATGGTTTGAAACAAGGTTTACTTGACTTTTATCAAGATCCAGCTGAAACTAGTGAAGCCATCAAAACACAGCTCTGCAAAGTTTTACAGGAAAATGGCTTATCCTGGGCATCAGTATCATCACTATCCGCAGATAATGCTTCAGTCAACTACGGGATTCATAACTCAGTTTTTCAAAAACTTAAAATTGAAAATCCAAATATTTTGAAGGCGAATTGTAAATGCCATATTCTACATAATTGTAACAAACATGCATTAAAAGCATTACAGTTTGATGTGGAGTCGTTAGTATTTAAAGTTTACAGCGAATTTTCCGCGTTTGCCAAGCGAACTGCAAAGCTAAAGGAATTCTTCGATTTCGCTCATTTAGAGTACAAATCTATTCTACGCCATGTGCCAACACGATGGCTATCATTGCTACCAGCTTTAGATAGACTGATTTTGAACTGGCCGGTTTTGAGAGAATATTTTCTAAGTGAAGGCGAGGATGAATGTGCAGCGATAATTTGGAGTGCTTTTAAAGATGAAAACTGTCTTCCACTATGCTACTgctattttattcacaacataATGCAAATTTTTGATACTTCAATTAAAAAACTAGAAAGTGACACTATTACATGCACTGAACTACACACAATTATGACAGAGTTGCGAACCAAGATTACTAACAGAAAGAATGATAAGTTCTACGGACAGTCGGCCACGCAATGTTTGAGAAAGTTGACGGAGGCTGATCAAAATACTTTTAAAGAAGATGCAGACAAATATTTGGAGCGATGTTTGACCTATTTGGATAAGTGGTACGAATTTGACGACTCTATTTACAAGAAAGTGAACATTTTGACAATGGACGAAGAAATTGACTGGAATGAATTAAAAGATCTGTGTGCTTTACTGAATGTGCCAATGGATGAGGATAAATTGTATGATGACTACTGTTTATTGCGAGAAGTTCGTGAGGTTGTGGCAAGTAAAACGAAGAGGGTAGACTTGCGCTGGatgTCTGACGGCGATGGAAAAAAGAAACTTTCTGGTGCAGAGAGTCGAAAAAGAAAGTTGGAGAAGGAAGAATCTCTAAAAAAGAATACTAGTTCCATTGAAAAATTTCTATTTCGATCCGATCCATCCTTACACAAAAATCTGAAGACATATGAAAACCAAGATAATTCTACAAGCGAAGTCATCTCGTCAACGCCGTGTCCGCCGCTACTGCCTTCGTCGTCGGCAGCAGTTCAAGAAAACCTACCTTCTAGTACCGAAGCATCTCCAGAGTACATACTTCGAGAAGATATAATTAATGACCTCGCGTTATGGCCACAGCTAGACAATGTCTGGCTTTACGCGGATCGTCAGAAAAACTGTACGATTCTGATAATGGCAATTTTCTAA
- Protein Sequence
- MVREYKRTYRHVRLGKTFLPYVSYTTEDLENAVREVREGDSSVRQAATKYNIPKSTLARKCKKDTIYESAGRPTLFNANEENAFLSYCEVLGEWGFPLDAFDLRVLAQKYLNRIGRTVHILKDNLPGRDWALSFMKRHKNRLSHKFATKISTERAKVSPETIDAFFENYITTISGVPPENIINFDETNLCDDPGAKKYVFKRGTKYPKKVLNNSKTAVSLMFTGTADGQMLPIYVVYKAERVWQPWIEGGPPDTRYNRSKSGWFDMTCFEDWFETVIVPFAKKKTGKKVIIGDNLSSHFSEKILESCESLNISFVCLPSKSTHLMQPLDVAFYGPLKKYWKNILTNWKTTADGRKYKTMAKSCFPKLLAQLCDLMIEKDVISANLKAGFEKSGLFPVNPERPKSRLPRALVTAAEVNLATSEVVIDILQDMRGFKDTAPSKRRKRCDVEPGKSICAKDLTPKPTTSTKGKGQGKKTKTHVNKKITTSSQNINKSRNPTKKRLNKAQHDLDESTSVSDNMSQHSDSDLMDLDLRKEYGSDDTNCSEEQAFSISYFENRVLSAEPEPGPSGESSRRRAVKPRPEPCENTLPDYEEELILGSNEKAARSRNEASMASPNEEELAQKPGYGSNLESVQHHSGQLAQNCEEEIIACPLAQGSNEQPAPGPINQLEPENNEEVAVQWFSLKDGLKQGLLDFYQDPAETSEAIKTQLCKVLQENGLSWASVSSLSADNASVNYGIHNSVFQKLKIENPNILKANCKCHILHNCNKHALKALQFDVESLVFKVYSEFSAFAKRTAKLKEFFDFAHLEYKSILRHVPTRWLSLLPALDRLILNWPVLREYFLSEGEDECAAIIWSAFKDENCLPLCYCYFIHNIMQIFDTSIKKLESDTITCTELHTIMTELRTKITNRKNDKFYGQSATQCLRKLTEADQNTFKEDADKYLERCLTYLDKWYEFDDSIYKKVNILTMDEEIDWNELKDLCALLNVPMDEDKLYDDYCLLREVREVVASKTKRVDLRWMSDGDGKKKLSGAESRKRKLEKEESLKKNTSSIEKFLFRSDPSLHKNLKTYENQDNSTSEVISSTPCPPLLPSSSAAVQENLPSSTEASPEYILREDIINDLALWPQLDNVWLYADRQKNCTILIMAIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -