Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963924445.1
Location
OZ004343.1:31339627-31401778[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5e-24 4.4e-21 76.2 0.0 2 89 101 184 100 184 0.94
2 3 6.4 1.9e+04 -2.8 0.1 51 74 1112 1136 1107 1142 0.65
3 3 2 6.1e+03 -1.2 0.0 44 69 1296 1322 1283 1339 0.66

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACTAATGTGGAAGTTAATATGGGGGACTCCGCGTCCCCCATGAAACCGGACAACTTCACCTTCACGCCGCCGCCGGAGGCCCCGGTATTTGAGCCTACGGCGGAGGAGTTCCTGGACCCATTGGCGTACATCAGCAAAATACGTCCTATCGCAGAGAAGTCTGGGATCTGCAAGATAAAACCTCCAGCGCATTGGCAGCCTCCCTTCGCGGTGGACGTAGACCGTCTCCGGTTCACACCCAGGATCCAGCGTCTCAATGAGTTGGAGGCCATAACCCGAGTGAAGCTGAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCTCCGCGCTGAAGATCCCTACTGTGGAGCGGAAGCCGCTTGATTTGTATGCGTTGCATAAGATTGTCAAGGAAGCAGGTGGCTTCGAAGTATGCTCAGCGGAGCGGAAATGGTCGAAGATCGCGCGCCGCATGGGCCACCCTCAGGGCAAAGGCATTGGCTCCATCCTGAAGAATCACTATGAGAGGATTCTGTACCCTTACGACGTGTTCAAGAGCAATGGCGCTATTGGGGATAATAAGGAGACTAAGATCGAAGTAAAACGCGAGCAAACCCCCGAATCCCCCGCAGCAGCCGGcacccgcgcccgctccgcctcCAAATGCCCCGCGAGCACCCCCCCGCCCGCGCCCCCCGCGCCCTCCCCCGCGCGCAGGTACAAATCCGAGCCCGAACCGGCGGCTGAGGGAAGTCACACCGAGGGTGCTCTGCCTCCCAATAACGATAAGGGCATGAAGACTCCGGTGAAGGAGGAGAGCCCGGAGACTAACAGACGCAGTCCACGCGAGAACAAGTGGATGTCAGGCACGGGCAGCTGCGGGTCGCGCGGACGCGTGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCAGTGACGCCCGCGCCACCGCCCGGCGGGCTGCCGCCCGCGCCCGGCGCCGCCGTCGCAGCCAACGACCCGTTGGCGAAGTACATGTGTCACGTGTGCGGTCGCGGCGACGTGGAAGAGCAGATGCTGCTGTGCGACGGTTGCGACGACTCCTACCACACGTTCTGTCTGTTGCCGCCGCTCGCAGACGTGCCTAAAGGAGACTGGCGCTGCCCCGTCTGCTTAGCTGAAGAGGTGTCAAAACCAGCTGAAGCGTTTGGATTCGAGCAAGCGTCCCGAGAGTACACTCTGCACCAGTTCGGAGAGATGGCTGACCAGTTCAAATCCGACTACTTCAACATGCCCGTACATATGGTGCCGACATCGACAGTGGAGAAGGAGTTTTGGCGCATCGTGTCGTCCATCGACGAGGATGTCACAGTGGAATACGGAGCTGATCTCCACTCCATGGACCATGGATCCGGGTTTCCGACCAAGTCCAGCGCGCAGCTGTACCCGAGCGAGCAGCAGCAGTACGCGGAGTCCAGCTGGAACCTGAACAACCTGCCGGTGCTGGAAGGCTCAGTGCTGGGACACATTAACGCAGACATATCTGGCATGAAgGTACCGTGGCTGTATGTCGGCATGTGCTTTGCCACATTCTGCTGGCACAATGAAGACCACTGGAGCTACTCCATCAACTACCTCCACTGGGGAGAACCTAAGACTTGgtacGGAGTCCCAAGCTCCAAGGCAGAGCAGTTCGAAGCCGCGATGAAGGCGGAGGCGCCAGAGCTGTTCCAGCTGCAGCCAGATCTGTTGCATCAGCTCGTCACGATCATGAACCCTAACGTTCTGATGAAAGCCGGCGTCCCGGTCTACAGAATGGACCAACACGCTGGCGAGTTCGTGATCACGTTCCCTAGAGCTTACCACGCAGGGTTCAACCAGGGATACAACTTCGCAGAGGCTGTCAACTTCACACCCGCCGATTGGTTGAAAATGGGTCGCGAATGCGTCCTGCACTACTCCACGCTGCGCCGGTACTGCGTGTTCTCGCACGACGAGCTGGTGTGCAAGATGGCGCTGGAGGCCGACACGCTCAGCCTCACCGTGGCGCTCGCCGCCTACAGGGACATGCGGGCCATGCTGCACACTGAAAGGAAACTGAGGAAGAACCTGTTGCACTGGgGTGTAACGGAAGCGGAACGCGAGGCATTCGAGCTGCTCCCGGACGATTCCCGGCAGTGCTTGTCGTGCAAGACTACGTGCTTCCTCTCGTGCGTCACGTGCCCGTGCACGCCGCACGTTGCCTGTCTGCGCCACGCCGCGCTGCTGTGCGCCTGCGCGCCACATCTGCACAGACTCAGATATCGCTACACCCTGGACGAACTACCCGCCATGCTGGAAAAACTGAAGAAGAAGTCTGAGCAGTTCAGAGAATGGGCGGAGGCGGTTCAGAATGCGTTGGATCCCGACACTCCTAAGACTTGCGACCTGGATGGGCTGAGGGCTCATCTGCACAGGGCTTCCGAACTTAAGATGCAAAAAACCGAGCTCGTCAGAGCCCTAGAAACGGCCATTGAAGACGCTGAAAAGTGCGCGTCAGTGATACAACAACTTGACCTGAACAAGATGAGGACTCGAACCCGCCACCACGACCCCAAGTACCGGCTGTCCATCCACGAGCTAACGCTCTTTGCGGCCGAGATTGATAGCCTGGCATGCGTACTGCCGGAAGGGTCTGCAGTGAAGGAAGTACTGCGTCAGACGTCGGAGTTCGAGACGCGATCAGCTGACCTTCTCCATAAGGACTTGGAGAAGATGGAGACTTCATTCGTCAGGGATTTGGAAGAGACGGTAGAGCTAGGCGGCCGGCTGTGCATTGTCCTGCCGCAGCTAGAAGCAGTGACGGCGCGGCTGGCGCAAGCGCGCTGGCTCGAGGACTCGCAGCACCACAGAGACAACTGCAACAGCCTCACCCCCCCTGTGCTGCGGCAACTACTGGCCAAGTCGGAGGAGCTGCTGCCTCATCTCGCTATTGAGAAGGAGAGGGCTGTATTGTACAAGTTACAAGCTGAAGTTGAGGAATGGGAGAGTCGAGCGCAGGCCGTACTGGTAGACACCAGCAAGTGCCCCCTGGACACCGAGAACCCTCAGTATAGCACCATCACAGAGCTGGAGCAGTTGTTGGCTGAAGGCTCCGACATCGACGCCGCGTTGCCTTCCTACCACACCTTGCAGACTGCCATCACACACGCCAAGGACTGGCTCAATAAGGTCGAAGAAATGCAAGCTAAAGATCTGTATCCGTACATGCACAGCGTAGAAATCCTCGTGAAGAAAGCTCAGCAGATACCCCTCGCGCTATTCGAAAAGGATCAGCTGACGGCCGCGCTGCActccgccaaggagtggaagcGAGGCGCTGCCGAGATGTTCCTCAAGAAGACTCCTCAAGAGAAGCAGAACAATGCCAACAGTCTGCTAGAGGCGCTGTCGCCGCGCACCGGCGCCGCGCCGCGCCGTGTCGCGCGCGCCGCCGACCTGGCGCCCTTCCTCGACAAGTTCAATGAGGACTCCACGCCCACCGAGATCGTGGCGGCCTTCAAGCAGGCGGAGGCCAAGGAGTTGCACGCTATTAAGGAGCTCAGAGGGCGCAATATGCGCAAAGACGTTCGCGCGCCGCCCGCTACCACCATCACGTTCTGCATCTGCCAGAAGCGGCAGTACGGCGTCATGACGCAGTGCGAGCTGTGCAAGGACTGGTTCCATGCTTCTTGCATCGCGAACGCGCGCGACGACCGCGAGGAGTCTCCGGACCGCGAAGGATTCCCTTCATCAGAGTCCAAGTTCCTGTGCCCCGACTGCGTGAGGAGCAAGCGGCCCCGCCTCGACCGCATACTGGCGCTGCTCgtatGGTTGCAGAAGCTCCCGGTGCGGCTGGCGGAGGGCGAAGCCCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAAGACGCGGCGCGGGCGCTCCTCTCGCAACCGCATCACACCACTAAGCCTGCGAGCAGGGAAAAGGCTGATAAGCTGAACGCAGAATTGAAGAAGGCTACCGGTCGAGGGCACGACACCATGTCACAGAACCCAAGGTCGTCTGCGTCAGTGGAGCACGCGTACAGCGCGTCCCCGCGCTCGCCCGGCGCGAGGCTGCCTCCGGCGGCGCTGCACAAACTGGAAGACCTCATGCTGGAAGGGGATCTGCTCGAGGTGGTGTTGGAAGAGCAGCAGCAAGTGTGGGAGGCGGTGAGCAGCGCGCGCGGCGCGGCGGGGCGGCGCGGCGCGCGCGTGCTGGACGCGGGGCGCAGGAAGCGGCACCGCGCCGCTCCGCGCCCGCACCACGCCAAGCGCACGCGCCAGGGCAGGCACGCGGGACCCCAAGCGGGTCCATCGACGTCTGCGGCTACGTCTACGGGCGCGGCCGCGTCTACATCGTCCGCCAAGCCCTCGACGTCGTCCAAGCGCGGTGGTGCGACCACCACCAACTATCTCAACAGGAAACAGGGCATGTCCTCAGCATCTGGTCTGATGATGCGCAAACACTACATGGCACGCCAGGAGAGGCGCAAGCGAGGCGTTGCCACTAGGCATAGAGGATCAACCCGCGGGGCCAGCACGTCCGGCGCGCGCGGCGCGTCGCAGGGCAGCAGCTCCTCGTCCATGTCTTCAGCTGAGGACGAGGATGACTGCGCCGCGCTTAACTGCCTGCGACCAACTGGCAAGGAAGTGGACTGGGTGCAATGCGACGGCGGCTGCGACGAGTGGTTCCACATGCACTGCGTCGGCGTCGTGAAGGGCACGCTCGGCGAGAACGACGACTACGTGTGCGGCGCCTGCGCACGCGTGCGTCATCGCCACCAGTGA
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSALKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAIGDNKETKIEVKREQTPESPAAAGTRARSASKCPASTPPPAPPAPSPARRYKSEPEPAAEGSHTEGALPPNNDKGMKTPVKEESPETNRRSPRENKWMSGTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPPGGLPPAPGAAVAANDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEEVSKPAEAFGFEQASREYTLHQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRIVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAQLYPSEQQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADTLSLTVALAAYRDMRAMLHTERKLRKNLLHWGVTEAEREAFELLPDDSRQCLSCKTTCFLSCVTCPCTPHVACLRHAALLCACAPHLHRLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLHRASELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRSADLLHKDLEKMETSFVRDLEETVELGGRLCIVLPQLEAVTARLAQARWLEDSQHHRDNCNSLTPPVLRQLLAKSEELLPHLAIEKERAVLYKLQAEVEEWESRAQAVLVDTSKCPLDTENPQYSTITELEQLLAEGSDIDAALPSYHTLQTAITHAKDWLNKVEEMQAKDLYPYMHSVEILVKKAQQIPLALFEKDQLTAALHSAKEWKRGAAEMFLKKTPQEKQNNANSLLEALSPRTGAAPRRVARAADLAPFLDKFNEDSTPTEIVAAFKQAEAKELHAIKELRGRNMRKDVRAPPATTITFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSSESKFLCPDCVRSKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLSQPHHTTKPASREKADKLNAELKKATGRGHDTMSQNPRSSASVEHAYSASPRSPGARLPPAALHKLEDLMLEGDLLEVVLEEQQQVWEAVSSARGAAGRRGARVLDAGRRKRHRAAPRPHHAKRTRQGRHAGPQAGPSTSAATSTGAAASTSSAKPSTSSKRGGATTTNYLNRKQGMSSASGLMMRKHYMARQERRKRGVATRHRGSTRGASTSGARGASQGSSSSSMSSAEDEDDCAALNCLRPTGKEVDWVQCDGGCDEWFHMHCVGVVKGTLGENDDYVCGACARVRHRHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
-
80% Identity
-