Basic Information

Gene Symbol
ARID4B
Assembly
GCA_963924445.1
Location
OZ004347.1:7666631-7688694[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-29 3.5e-26 92.5 0.1 1 89 144 230 144 230 0.96

Sequence Information

Coding Sequence
ATGGATATGTATTTTATTCGCAGGTCAGACGACAGCGACGGCGATGGCCCCTCCCGCCCTCGCAAAGCTGACAGCGCCGAGCGCGAGCCTCACGTCGGCCGCGTCGTGCTGGTGGAGGCCGCCAGCGGCACGGAGAGGCGCCGTCCGCACCAGCCCGCCTTCCCTGCGCTAGTGGTGGCGCCCACGGCGCAGATCAAAGTCAAGGAAGATTATCTTGTGCGCTCATTCAAGGATGGCAGATATTACACAGTCCCGAAGAAAGAGGCCCGTGAGTTCCGTAAAGGCAGCGCGCCACTTGAGTGGTCGGGCGTCGAAGCTGCCCTACAGTATATGAACAACGGCGTGTTGCCGCCGCATTGGGACCGCGACTCGCTGTTCAACGAGCCCAGGAATACTTCCGACGATAGTTCTGACGATGAACCTCGCGAGGAGAAGGACCATTTTGTCGCACAACTGTACAAGTTTATGGACGACCGCGGAACGCCGCTCAATCGCAACCCGACCATCGCAAACAGAGATATCGATTTGTACAGGTTATTCCGGGTTGTGCAAAAGCTTGGCGGTTACAATAGGGTCACAAACCAAAACCAATGGAAGTCAATTGCAGACAAGATGGGCTTTCATCCAGTTACTACCACCATCACTAATCTTTGTAAACAGGCTTATAAAAAATTCCTGCACAGCTTTGAAGATTTCTACCGTAAGCTGGGTGTGACGCTAGTCGCGCACCCTCGCGGCGCGCGCACGCCGCCCGCCGGTCGCTCGCTCATACGCGACCGAGATAAACAACCTCCCACTTCTTCTTCCGCATGTTCTACCCCTACAGGACCTCCTACTTTGcGCGGCAAAGACAAGGACTCCGACAAGAGCGAAACAGATAGGAGTGAAAAGGACGACAAATCTGAGAAAGGCGACAAAAAGGAGAAACCTCAAATTAGTGATGAAGAGGACAGTGCTGACAATCAGCCGCTCATTGTAAATGCGCCTAAATTATTAGAAAAAGAAAAGGAAAAggagaaagaaaaagaaaaagagaGGGAGAAGGAAAAAGAAAAGGAGCGAGAGAAAGAGAAGGAAAAAGAAAAGGAACGTGAAAAAGAGaaggaaaaagaaaaagaacGGGAAAAGGAAAAAGAGAAAGAGAAGGATATTCACAAGGAGCGAGAGAAAAGCACTTCGACAACCACTAGTGAAGAAAAAGTGCTTGTGATAAAACCTCGTCCGCGTTCGCTGTCTAAAGCGCGGACTATCACGCCAGTTAAGAACGAAAGGACGCCTAAAAGGCGACCGCTTTCGTCGAAAAGTGAAAGTGCAGGCCCTACTGTGTCCCGTGCATCGAGACGACCTCATGCCTCCACGGATAGTGATAGCTCTGTATCAGGGAGGGCTTCAAGATGTGGACCTCTCACGAAAAAGTTGCAAAGTCGACGCAGTCAAAGCGCAAATTCCGCAAGCAGTGGCAACACTATAGCGTCCAACAGCAGCAAACGTCCAAGGAAACGGAAGACGACAGAGCCTTCAATAAATGAACCAACTACTTCAAGGATAGTTTCAGGAGTGAAAGCTCAAGTTGGTGATAAATTGAAAGTATACTATGGACCAACACAATCAGAATCAAAGGTGACGTATGAGGCGAAGGTGATAGAGATATCTGCGGAAGGCATGCTCCGTGTGCACTATACCGGTTGGAACACTAGATATGATGAATGGATCAAGCCACAGCGTATCGCAGTAAATGTGTCTCAAAACGAGGCCAGGAACAAAAAGGGATCTAGTATGAGCAGACGCGTAAGAGCTAAGAGAACTGAAGAATCGTCAGCCATCTCCGACTCTGATACTTCGGATAGCGACGAAGATATGAAACTACCTCCCAAAAAGTTGGATGACAAATCCAATGCCAGCACACCAAGATCGAAAGATACAAAGTCGAGTGACAGCAGCAGTTCCAGTAAACCTCGCAAGAGACCTGTACGGAACATCTCAACTCCAACAAACGTCTCGCCAGCCAAGAAACTTCGCCCCAATGCGCCCTTGCCCCAAGGACGCGACTACGATCTAAACGAAATCAGATCTGAACTCAAAGGCTTTAACACGGTCAAACAAGAACCTGAAGAAATCAAACAGGAACCCTCTGATAAGGAGGCGACTGCATTAAGTCCAGCTCAAATACCTGTTCCTCCAAATGATCCCCATCCAGAAAAGGGAAAAGAAGAAGACGTTTACGAATTCAAAGAACCTGAACCGTTTGAGCTGGAACTGCATGATGAAAAGAAAAAGCGAACGCATCGCATTTTCGACGATATATCTCCAAGCAAATACACGTCTACTCTCTCCAAGTCCCTGAGCGAAGAGATCAACGAAGACCCGATGAAGCCGCGAACGACCAGCCTTAGATCCCCATCACTATCACCCTACAGAGACTTCGCCGGTACATCAGGAGTCGGAAGGCAAAGTCCTGAAGAAGATTCTAAAGACATGTTCTCACTTGACGATGACTCGTTCCATGGAGACGGCAGCTCAGGACCAACCTTCGAAGGCTTCACACCGGCGAAGAACcaagaaacctattccaagaaAAGCAAAGTTTCCAAACTAAGGCAATTGATAGATGATTCACCAGACAGTCCGGCTGATGATGAACAATCATCTGACGAATCTGAGGATATCGCTATGAAGGAagacgatgatgataatgaagggTCAAAATCAGTATCTCCAACTACAGGAAGCACAGAGGAATCAAAATCTTCAACTTCTTCGGTTCAAGACGAACCAAAAGCAATGGATGaagatgaaaatgaaactaaagAAGACAATAAAGAAACTGATAAAGCATCACCAACTGCAATGATGAtagatttacaaaatattcCGAAACCACCAAACAGTCCACCACCCCTACAGAATATTAATATTCCCATGAAAATTGAAGTGCCTACTAAAATCGAAGAACCAAAAAAGATCGAATTACCCAAAAAACCTGAACTCCCTAAAGCGGTGGAGCCTCTTAAGAAAGTTGAAACCCCTAAAAAGATTGAACTTACTAAAAAAACCGAGCTACCTAATAAGATTGAAATCTCTAAGAAACTTGAACTACCTAAGAAACCTGAACCCTCTAAAAAACCGGAACCTTGTAAGAAAATCGAAACTCCTAAAAAAATTGAGTCAACCAAAAAGGTGGAGCCcattaaaaaagttgaaactcCCAAGAAAATTGATATtcctacccctaaaaaggttgAACTTCCCAAGAAAATTGAATTTCCTAAAAGAATTGAAAACCTCAAGAAAAATGAACTTTCTAAAAAGACTGAACCACCCAAAAAGATTGAAGCCCCTGAAAAGGCGGAACTGACTAAGAAAATTGACTTACTTAAAAACCTAGAACTCCCTAAAACCACTATAATACCCCCTGTAATACCTAGTACTAGTATTCTAGCAGATGCTAAAGAAAAAACAGcagaagaaataaaaaaggaacatcAGATTAAACTATTATCCATACCTCTGCCGTCATCAGAGCCTATCAAACTTACTCCTAAGAAATTAGATCCAGAGCCGTTTAAGACAAAGCTAGAAATGCCTTCAAGCCCTCTCATCGACGCTGAGGAAGATAAATCCGAGCCGGACAGCCCAGCACGAATCGACGTACTACCGGAACCGCCACCTGGCTTCTTATTACAATCTGAAGGACCCAAAATAGCCGAGAAACTTCTCAAGGCTATCAGCAGTGCGAAGAGACTATCCATGTCTCCACCGCCAGTAGACAACCGCACCAGTCCCGTAACTCCTAGGACAGATTCATTAAAACCTGCAGTAACTGACACCAAACTATCGCCCATATCGCCTGAACCTATCAAACCTGTAGTCAAAGTTACCGAGGCACCAAAGAAAGAAGATCCCATCTTCGGGGAGCCGTCTAACATTATGGATACTAAACAGGATTCTTTGGATATAAAGAAAAAGGAAGGATCGTTAACTCCAAGGTTGCAAAGTCCTCTGAATATTCTAGAAAGGAGAAAGAGCGTAGCCACAGACTTACCGCTAAACGTTGTTGCCGGGAAGAATAACAAGGTGCTGAGTGATACCATACAGAAATTATCAAGCCAAATCAACCAGTCCGCTGCGAACAACCAATCAGCGGCGTCTGTAGTAGCGGCATCAGTCGCAAACATTCCACTGCCTGCTTCATCTATACCATTCTTGTCTGAAGATAGAAGCGAATCTAGTGACTCTGACGATTCTAGTAGAAGGCTAATCATCGATAAGTTATCGATGGAAGAGTGGGGCAACGGGGCCAGCTCTGACGCGTCACGGACCGCGCCGTCTGTGGCGGGCCATGCGGGCCTGAGAGCTCTACATCTGGGGAAATCGCCGGGTGAATGGAGCGCTGGAGAATCACTGCTCATGTTGGAAGACGCTTGCAAGAATGAGAGGAAACACAGTGCGAGCGTAGTAGTAGCGGGAAGCGGTCGCGTTGCTTCCACCGCCAGCACTTCAACCGCGCCTGTTGTCGCGCAGCCAATCACAGTACCTGCGCCCGCAACGCAAGAAGAGGACAGCAATATATCGCTGTTGCTTTGCGAAGAGACGATCCCAGGATCACCGGCGCCCGATGCGGAACCGGCGCCGCCGCGGCAGAGACCGCATATGCCTTTCGCGTCGGCGCCACCGCATCATCTTGCTAAAGACGATCGTCGCGGCGAAGGTGCATCTCGAGGCAACAACCCGAATCCCCCAGCGGAGGGCGGTGCGGGGGTCGCGGGCGGCGCGGCGCCCCCGCCCGAGCGCGCGGCTCCCGCTGGCTGGGGCCGCGGCCGGCTGCTAGTCGACAACACGCCACCCACCACTCCCGATAGCAACCGCAGCAGTCTTGAGATGTCACCGCAAAGGGAACGACGTATGTCGGAACGCGACAGTCCCTCGGAGCGCAAAGAGGAAGACGACGAAAATAGCCGCCCGATTGATGCATCCGTCGATATGGACAAATCAGCTCATGGCAGTAGATCCCGCAAAGCGTCCGAGTCGTCGGCGGCGGGCGCGGGCCGCGGCCGCCGGCGAGCCCGCCGGGACACCGATGAACACGGCTCTCACAACAACAGCACAGCGACGCTCAAATACAACTTCTATGTCGAGCTGGATCCTACATGGGACTGCCAAACTCGTATCAACGTGCTGACGACGCGTCTCTCAGATCTGCGCAAAACATACCACTCCGTGAAGGCAGAACTAGCGGCCATTGATAGACGACGCAAGAAGTTACGCCGGAAAGAAAGAGAGGTCGCGCGCGGGCGCTTGTTATTGTTAGACGCGTACGCTCGTTATCAATCACAACAGGTTCGAGCAGCCGCTTCGCGCAATATAGTGCACGCGAACGATGCGTTAGCAATGAATAGCTTCGCATTACTCGATGACAATGAGGAAGACAAGTCAAgtgatttaaataatttaatggaGCGTTATAGCGAGGTGAATAATAGTTATGAGAGTTTGATTGAGATGGAGAAGGGTGTAGAAGATAATACCAATGAAGAGAGGAGGAGACCACAAAAGAGAAACCGTGGAACTAATCAGGAGGAGATTTGGACTACTGTGGGAAGGAGAGGGAAACGATTTGCTCGTGCAGCGGGTCCCGATGAGTCGATTATAGTACCAGAAGATAAAATTGAAATCTGCATGACGTGTACGGAAAAGCTACCTAAACAATTTAGACTAGCCAAAGCTCTTAAATCAGAAAATATACAAGACGTGGTTCATGTTAAATACATCAACCCTTACAAGGTGAAGACCTTTGAAATAAGCCAGTCATACGGAGTCATAAAGGACGTTGACCTTGACCTTACTGATGAGGAAATTTTGGAAAGTCTTAGCTGTGACACTTTAATTATGGGGGTCAAAAGGCTTAAGCGTAGAAATAATTTTGATGGACAATGGCAGCTTAGTGAATCAATCAGAATATGTTTTAAGGGATCTTCATTACCTTCACACGTCAATGTGTTTGATACAAGAGCTAACATCGAATCTTATGTGTACCCAGTTACGCAGTGCTCCCATTGTTGGAGATTTGGCCATACCCTCAGGATGTGCCCATCTAACAGGGTGGTTTGCCCCAAATGTAGTAATAATCATGGTAACTGCGAAACAACAGCCTTTAAATGCAACAATTGTGGAGGGAAACATATGGCCCTGTCTAAAACTTGCCCCGTATTTATTAAAGAAAAGAGGATCCGAGAGCTAATGGCAGAATTCAACTGTTCGTACAAAAGAGCGCTCACTCTGTACGTGCCTCCTACACCCCCCGCTCCACCCCGTGTAGCAGAAGACTTCCCAgtaatttcttccaggcaagggACCGAGTTACGTGAACAGCCCTACCCTACTCCCGTAACTTCAGCCATGAATCAGAATGATACATTCGCAAATGTAGTCAAGGAATCACAATCCAAAAAGGGAAATAAGAGAAAAAGTAAGAGAAAGGGATCCGACAATTTAGAAGATAATAATGCTAATTTCGACACTGGGTCAGAAGAGAGTGAATATGAAAATAGAAGCAGGACGCAGGATGAACCTGGTTCAGGAAAGAAGGCAAAGCATAAGGGAATAATTTCGTGGAAGATACTGATTAATAAATTAAAGGAGAAAATACTTGACAGTAACCTATCGTGGGAAGATAAGATAAAACGTTGCATAGAAATTATTTGTAAGAGTGCCATATCATTCGCCGTGCAGTACTTTTCAGATTTGCCTTGTTTTGCATTTCTGAACCAATTCGGATTGGGTTAA
Protein Sequence
MDMYFIRRSDDSDGDGPSRPRKADSAEREPHVGRVVLVEAASGTERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWSGVEAALQYMNNGVLPPHWDRDSLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKSIADKMGFHPVTTTITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQPPTSSSACSTPTGPPTLRGKDKDSDKSETDRSEKDDKSEKGDKKEKPQISDEEDSADNQPLIVNAPKLLEKEKEKEKEKEKEREKEKEKEREKEKEKEKEREKEKEKEKEREKEKEKEKDIHKEREKSTSTTTSEEKVLVIKPRPRSLSKARTITPVKNERTPKRRPLSSKSESAGPTVSRASRRPHASTDSDSSVSGRASRCGPLTKKLQSRRSQSANSASSGNTIASNSSKRPRKRKTTEPSINEPTTSRIVSGVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISAEGMLRVHYTGWNTRYDEWIKPQRIAVNVSQNEARNKKGSSMSRRVRAKRTEESSAISDSDTSDSDEDMKLPPKKLDDKSNASTPRSKDTKSSDSSSSSKPRKRPVRNISTPTNVSPAKKLRPNAPLPQGRDYDLNEIRSELKGFNTVKQEPEEIKQEPSDKEATALSPAQIPVPPNDPHPEKGKEEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEINEDPMKPRTTSLRSPSLSPYRDFAGTSGVGRQSPEEDSKDMFSLDDDSFHGDGSSGPTFEGFTPAKNQETYSKKSKVSKLRQLIDDSPDSPADDEQSSDESEDIAMKEDDDDNEGSKSVSPTTGSTEESKSSTSSVQDEPKAMDEDENETKEDNKETDKASPTAMMIDLQNIPKPPNSPPPLQNINIPMKIEVPTKIEEPKKIELPKKPELPKAVEPLKKVETPKKIELTKKTELPNKIEISKKLELPKKPEPSKKPEPCKKIETPKKIESTKKVEPIKKVETPKKIDIPTPKKVELPKKIEFPKRIENLKKNELSKKTEPPKKIEAPEKAELTKKIDLLKNLELPKTTIIPPVIPSTSILADAKEKTAEEIKKEHQIKLLSIPLPSSEPIKLTPKKLDPEPFKTKLEMPSSPLIDAEEDKSEPDSPARIDVLPEPPPGFLLQSEGPKIAEKLLKAISSAKRLSMSPPPVDNRTSPVTPRTDSLKPAVTDTKLSPISPEPIKPVVKVTEAPKKEDPIFGEPSNIMDTKQDSLDIKKKEGSLTPRLQSPLNILERRKSVATDLPLNVVAGKNNKVLSDTIQKLSSQINQSAANNQSAASVVAASVANIPLPASSIPFLSEDRSESSDSDDSSRRLIIDKLSMEEWGNGASSDASRTAPSVAGHAGLRALHLGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGSGRVASTASTSTAPVVAQPITVPAPATQEEDSNISLLLCEETIPGSPAPDAEPAPPRQRPHMPFASAPPHHLAKDDRRGEGASRGNNPNPPAEGGAGVAGGAAPPPERAAPAGWGRGRLLVDNTPPTTPDSNRSSLEMSPQRERRMSERDSPSERKEEDDENSRPIDASVDMDKSAHGSRSRKASESSAAGAGRGRRRARRDTDEHGSHNNSTATLKYNFYVELDPTWDCQTRINVLTTRLSDLRKTYHSVKAELAAIDRRRKKLRRKEREVARGRLLLLDAYARYQSQQVRAAASRNIVHANDALAMNSFALLDDNEEDKSSDLNNLMERYSEVNNSYESLIEMEKGVEDNTNEERRRPQKRNRGTNQEEIWTTVGRRGKRFARAAGPDESIIVPEDKIEICMTCTEKLPKQFRLAKALKSENIQDVVHVKYINPYKVKTFEISQSYGVIKDVDLDLTDEEILESLSCDTLIMGVKRLKRRNNFDGQWQLSESIRICFKGSSLPSHVNVFDTRANIESYVYPVTQCSHCWRFGHTLRMCPSNRVVCPKCSNNHGNCETTAFKCNNCGGKHMALSKTCPVFIKEKRIRELMAEFNCSYKRALTLYVPPTPPAPPRVAEDFPVISSRQGTELREQPYPTPVTSAMNQNDTFANVVKESQSKKGNKRKSKRKGSDNLEDNNANFDTGSEESEYENRSRTQDEPGSGKKAKHKGIISWKILINKLKEKILDSNLSWEDKIKRCIEIICKSAISFAVQYFSDLPCFAFLNQFGLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-