Basic Information

Insect: Philaethria dido
Gene Symbol: mep-1
Assembly: GCA_033558755.1
Location: JAKGSA010000583.1:32792-36135[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.18 13 6.9 0.4 1 23 492 515 492 515 0.94

2 6 4.3 3e+02 2.6 0.3 2 20 529 547 528 549 0.90

3 6 0.053 3.8 8.5 0.0 3 23 707 728 705 728 0.94

4 6 0.068 4.8 8.2 0.5 2 23 744 766 743 766 0.92

5 6 0.2 14 6.8 0.2 2 20 785 801 785 805 0.71

6 6 0.026 1.9 9.5 0.8 1 23 816 839 816 839 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.18	13	6.9	0.4	1	23	492	515	492	515	0.94
2	6	4.3	3e+02	2.6	0.3	2	20	529	547	528	549	0.90
3	6	0.053	3.8	8.5	0.0	3	23	707	728	705	728	0.94
4	6	0.068	4.8	8.2	0.5	2	23	744	766	743	766	0.92
5	6	0.2	14	6.8	0.2	2	20	785	801	785	805	0.71
6	6	0.026	1.9	9.5	0.8	1	23	816	839	816	839	0.95

Sequence Information

Coding Sequence: ATGTCTATATCAACGGCCACAGatGAACGCACAGAAGGCGATGATGACACATCACAAGGAAGCCATCCTAAGGAGGATACCAGtgactcagaaaatgaaaatgaaaatgaacctCAAAATCAAAATGGGGGTTCTGTTAGCCCTGAAGTTCATGAAATCACTAGTGATGAGGAGGATTGTGTAGTGACCAATGAGGATGAAACATCAAATTCTAGTACTGAATCAAATGACAGTTCAGAGGGATCCCAACAGAGCAATAAGGATAGAGATAAAGAAAAAGATGAACAGCCATTAGAAAATGGTGGGGAAGAATCTGATGTAGAGGAAGTTACCATTGAAGATCCATTAAATCAATCTCATGGGAGCAAGGCCAAACCCATAATTATTAATGACACAAAAAATTTGTCAGAGTTGGCATCTAAACAAAGTGATTCAAATGACAGTGAACAAAACAAGGAGCCCACAGTTGTTATAATAGATACAAACTCTATATTGTCTGGCAAAGGCCCTACACCAGTACAAAATAAGACAAGTACCAGCCTTATTGATGCTCAAAATTTATGTCAAAGTATTGCTGCTCGTGGAACCACTATAACTCCTATTAGTTGCAAATCTAGCACTAACAATTCTAGAGCTAGTCAAAATAATACATCAGCTGCCCAACCAAATATTTTACCATCATTGACAGATGATATGTTTGTAGTAGAAGCTCCTTCATTTATTGTTCCGTATGTATATGAAAAACCATCTGTCAAACCATTTAGGGAGTTTGTTGACAAGTTAGGCAAAGAGTTAGAAGAAATTAAGCTTAAAGAAGACCAAGAAAagttagaaaaagaaaaagcagaaaaagaaagaaaagaaaaattaagaaaagaGAGAATTGAAAGAGGTGAAGATGTTGAAGATGAAGTGGAAAGTGATATTGAAAGCAAAAAAACTGAAGATCTTGCAAAGGACAAGAAAACGAAGGAAGAGAAAAAACAACGCCGAAGACGTAGAAATGAAGATGATGATGACTCCTGGGATGGTGAGTCATCTAGTGAGTCTGAAGAAGATGGTCTCAGTGATGACGAAACTGTGGTTATTAAAGACAGAGATGAAGTTATAGAAGATGTTAAAGACCCAATCAGTATGATTATTAAAGGTATTGCTGGTAAAAACGATAGTTATTTTGATTGTTCGTTAGGTcagttttttataaacataggTATTAATTTAGTACAGGAATATGTCCAAAGTGATTTGCTGAAAACACAAAACAGAAAActttataaagaaaagaaatctGGTCGCAGTACTCGAGCTACTGAAACTGCTATAGCATCTTTAACTCAGAATTTAGCATACAGCAAAAAACTAAATGCTCCTTATGCACTTGAACAAAAGCGATGTGAATTTTGTAGTTTTAAAACTGAATCAATTTTAGTTATGGCTCATCATTTAGAGGCTCCTCatatgaaaaacaatatatataaatgtaacacaTGCCCATTTGAAATACGAAGTCCTCATGATATTCTGTATCATATGGAGGCTGAGCACAACATTAGAGGGAGATTAGAAAGAGCTCCTGCATATCAACAGTGCCCTAATTGTCACTTTGAAGATAACAGTAAGACAAAATTGGCGCGCCATCTAATTGCATGTGCTAAGAAGTTTAAACCCGAATTTAATCTTGGACCGCCCCTTGAGTGGGAGCCTCCCGCAAAGATACCAAAGCTTTCTAGAGCACGTAATAATGTTGTTGGACCATATCAGTCGGGATTTAATAGATCGCAGGTAGGAATGACTCCCGTTGGTAGACCCTCTATTAATATGTCTAGCACCCCTGTTCCTAGTATGCCAGTTCTGGGACGACCTAGAGGCCGGCCGCCGCTGGCGGGGCCCGCTCGTGCTCCTGTTTCAGGCGTGCCTATTATTCGCAGTGGCGTTATGATTATGCACAATAATCAAGGTAGTAGTGGGACCACAATTTCTAATTAtcctataatacaaaataatcaagGAAACCAATCGTCATCAGCGACACCTAAGATATCTATTACACCGTTACCTCGTGCGCCGCAACCTTCTTCATCGAACTCCACACAAAACTCTAAAGCCACATTTGTTATTTGTGAAATTTGCGATGGATACATCAAAGATTTGGAACAATTACGAAATCATATGCAATGGATACACAAGGTGAAGATTCATcctaaaatgatatataatagaCCTCCTTTAAATTGTCAGAAGTGTCAGTTCAGATTCTTTACTGATCAAGGGCTGGAGAGGCATTTATTGGGTGCACATGGCTTAGTTACAAGCTCTATGCAAGAAGCAGCTAACAAAGGAAAAGATGCCGGCAGGTGCCCAGTGTGTGGCAGGGTTTATCAGTGGAAGTTGCTAAATCATGTATCCAAAGATCACAGTATGACCCTTAAACCTGCTCATCTCTCTTATAAATGCACTGTGTGCACTGCTACATTTGGCATGTATAAACAATTTGAAAATCATGTTTACTCGGCCCATAGTGTTGTGGCAAAACGCGTAATAGATAAAAGTAAGACATCTACCCCACCTACCAAGACTACAGAAACTGATCCTTTGCTCAAGCCACTCAAAATAAGCGATGAGATCACGATAATACCTCAACCTGCTAAATCGTCAGTGACCATCACTGCCAAGGGCAAATAA
Protein Sequence: MSISTATDERTEGDDDTSQGSHPKEDTSDSENENENEPQNQNGGSVSPEVHEITSDEEDCVVTNEDETSNSSTESNDSSEGSQQSNKDRDKEKDEQPLENGGEESDVEEVTIEDPLNQSHGSKAKPIIINDTKNLSELASKQSDSNDSEQNKEPTVVIIDTNSILSGKGPTPVQNKTSTSLIDAQNLCQSIAARGTTITPISCKSSTNNSRASQNNTSAAQPNILPSLTDDMFVVEAPSFIVPYVYEKPSVKPFREFVDKLGKELEEIKLKEDQEKLEKEKAEKERKEKLRKERIERGEDVEDEVESDIESKKTEDLAKDKKTKEEKKQRRRRRNEDDDDSWDGESSSESEEDGLSDDETVVIKDRDEVIEDVKDPISMIIKGIAGKNDSYFDCSLGQFFINIGINLVQEYVQSDLLKTQNRKLYKEKKSGRSTRATETAIASLTQNLAYSKKLNAPYALEQKRCEFCSFKTESILVMAHHLEAPHMKNNIYKCNTCPFEIRSPHDILYHMEAEHNIRGRLERAPAYQQCPNCHFEDNSKTKLARHLIACAKKFKPEFNLGPPLEWEPPAKIPKLSRARNNVVGPYQSGFNRSQVGMTPVGRPSINMSSTPVPSMPVLGRPRGRPPLAGPARAPVSGVPIIRSGVMIMHNNQGSSGTTISNYPIIQNNQGNQSSSATPKISITPLPRAPQPSSSNSTQNSKATFVICEICDGYIKDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGAHGLVTSSMQEAANKGKDAGRCPVCGRVYQWKLLNHVSKDHSMTLKPAHLSYKCTVCTATFGMYKQFENHVYSAHSVVAKRVIDKSKTSTPPTKTTETDPLLKPLKISDEITIIPQPAKSSVTITAKGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00723615;
90% Identity: iTF_00457658;
80% Identity: -