Basic Information

Insect: Philaethria dido
Gene Symbol: -
Assembly: GCA_033558755.1
Location: JAKGSA010000480.1:263359-268601[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.4 98 4.1 0.8 2 23 601 619 600 619 0.66

2 5 2.6e-05 0.0018 19.0 0.6 1 23 625 647 625 647 0.97

3 5 0.0057 0.4 11.6 1.5 2 23 654 675 653 675 0.95

4 5 0.00033 0.024 15.5 0.6 1 23 681 703 681 703 0.98

5 5 7e-06 0.00049 20.8 1.7 1 23 709 732 709 732 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.4	98	4.1	0.8	2	23	601	619	600	619	0.66
2	5	2.6e-05	0.0018	19.0	0.6	1	23	625	647	625	647	0.97
3	5	0.0057	0.4	11.6	1.5	2	23	654	675	653	675	0.95
4	5	0.00033	0.024	15.5	0.6	1	23	681	703	681	703	0.98
5	5	7e-06	0.00049	20.8	1.7	1	23	709	732	709	732	0.97

Sequence Information

Coding Sequence: ATGGATGAAAAAGTTTTTGTGTGGACATCTGAGTTAACAAGCAGGTTTTTTGAATTACGCTTTCAAAACGattggttatttaaaaaaaataaacaaccgTGGCGTGAGTTTCACAAAATTCTGTTGGAAAATGGTTTTCCTGATGAAATTACAGTGAAACATATAAGGAAGAAGTGGTCATATACATATGATtcATACAAAATAGCTAagaagacaaaaaataaaagttggAAATATTATAGAATGTTTGAAAAACATTTTGGCAAAGCAGAAGTGTTAGATAAATATGAATCATGGAATAATGAATGgagattaaaattaataatatgtataactgAAGCTAAAGAAGTAAAACTTGATTTTCATAATATGTGGcaAACAGTTGAAACTGCTCTAAGATGTCAAGATTTGCCTTTAGAATGCTGCATACAAGATTTAAAGGGGTTATGGCATTATATGAGAACAACATTTAATaGAAAACACCGTTTAGTTGTAAGGAAAACATTATGCCCTGAAGAATGGATACTGTATCAGCCAATGATGGATTATTTTACTAAACATGAGCCACAATACCTAGAAAGGCTTGAAAATTTGTCAGCACGGAGTCTGGCTAGGATACAATGGAGGGAAAAGCATCGACCCCGTGGGAAAGTTACTGTTAATGATATAATAGAAGAGTTTCAATGGTCCAAAGACATAACTGAGTCTTTTATACAAATTCGACTGCAAAATGACTGGTTATTCAGGGACCGGAAATGGGCTTGGagtagTCTCCGCACAATCATGATAGAAGAATATGGGTTTCCAAAAACATTGTGTGGAAGAGAGCTTTGCCGAAAGTGGTCGGCGACATACAGGGAGTATCAGAAAGCGAAGGCTACGAACAACAAATCGTGGGTGTACTATAATTTGTTTGAGCTGTACTTTGGAGAAGGCAGTTTAAGCCTTAATCCTTTGGTAGGCTggGAAGAGGAAtgggttttaaatttaataagcacGAGAACAACTTTAGATCATTTGTTTAGATTTGcaccaaaaaatataaacgatTCTTGGCGAGATGTCGAAAAAAGGCTAAGAACAATGGGAATACCTTTGGACCATAGTTTATTGGAATTGGCTGAGATTTGGACACATTTGATAAAAACTTACAGGTGGAAACAAAAATTCGCTAACAAAGGCATACTCAACGAGCACTGGCCGTACTACGATTCTATGGCCAAGTATATGGAAATACATGAGAACGAACTGAAGGAGCAAAGTGACCATTTCGATGACGTCATAGATGACGTGGAGGATGACATGaagttatttgatttaaaacaaAGATTGTCTTTAGTTAAGCCTAAGTTTGAAGAGTTAGAAACGAATGCGTGTAGAACGTGTTATAACGAGCACGGCTGTGTTAGTATATTCGAGCAAGTGGATAATGAAGGGTTGGACTTGGCTCACAAGTTGAGAGTTATTGGCGGTGttgaggtaAATCAATCAGATACATTGCCTGCACAAATATGCCTAAACTGTGTTAAAGAATTAGAAAACGCGTACAAATTTAGACGAAAATGTCAAGAAACTGACCGAGAACTTAGAAGTAGTAGCAAAATTAAAGTAGAAATACAATCAGATTTAAACAACCAATCACCAAAGCATCACGATGTTGAGGAGCCCCAGGACTTCGACACGGACTTAAACTATGACGATTTGACAGAGGAAACAGTGAAACCAGATCAATCCATTAAAACAGAGAAGAAAgtaaaaagaagaaagaaagtgGCGAAACTTAGATACGACTATTGGAAGGTGTGTGAAGTTTGCGGCAAACACACGAGGAACCTCCTCAGCCACCTCGATGTACATTCCAGTGAGAAGTGCTACTCGTGTGAGATATGCCAAaagaaattcaaattcaaaagcGGTCTCATCATACACAAGGCGGTCCACAATCCGACACCAAAAAAGACGTGCGAGGTTTGCGGAAAGAGTTTCCACATAATGGCGCAATACAGGCGACATTACGCATATCACGCCAACGAGAGGAAGTTTGAATGCGAGACATGTGGTAAAAGGTTCAATTCTTTGGATATTTTGAGAGTTCATAATAGATCGCATACAGACGAGCGGCCGTTCAGTTGTTCTGAATGCGGCAAGTCGTTCCGTACAGCCGGCTGCGTCAGCAGACATCGACGGATAGTCCACAGAAACATTAAAgttgtaaagaaataa
Protein Sequence: MDEKVFVWTSELTSRFFELRFQNDWLFKKNKQPWREFHKILLENGFPDEITVKHIRKKWSYTYDSYKIAKKTKNKSWKYYRMFEKHFGKAEVLDKYESWNNEWRLKLIICITEAKEVKLDFHNMWQTVETALRCQDLPLECCIQDLKGLWHYMRTTFNRKHRLVVRKTLCPEEWILYQPMMDYFTKHEPQYLERLENLSARSLARIQWREKHRPRGKVTVNDIIEEFQWSKDITESFIQIRLQNDWLFRDRKWAWSSLRTIMIEEYGFPKTLCGRELCRKWSATYREYQKAKATNNKSWVYYNLFELYFGEGSLSLNPLVGWEEEWVLNLISTRTTLDHLFRFAPKNINDSWRDVEKRLRTMGIPLDHSLLELAEIWTHLIKTYRWKQKFANKGILNEHWPYYDSMAKYMEIHENELKEQSDHFDDVIDDVEDDMKLFDLKQRLSLVKPKFEELETNACRTCYNEHGCVSIFEQVDNEGLDLAHKLRVIGGVEVNQSDTLPAQICLNCVKELENAYKFRRKCQETDRELRSSSKIKVEIQSDLNNQSPKHHDVEEPQDFDTDLNYDDLTEETVKPDQSIKTEKKVKRRKKVAKLRYDYWKVCEVCGKHTRNLLSHLDVHSSEKCYSCEICQKKFKFKSGLIIHKAVHNPTPKKTCEVCGKSFHIMAQYRRHYAYHANERKFECETCGKRFNSLDILRVHNRSHTDERPFSCSECGKSFRTAGCVSRHRRIVHRNIKVVKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00621606;
90% Identity: -
80% Identity: -