Basic Information

Insect: Philaethria dido
Gene Symbol: ZIPIC
Assembly: GCA_033558755.1
Location: JAKGSA010000761.1:84572-94447[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.6e-05 0.0039 17.9 2.8 1 23 251 273 251 273 0.99

2 12 0.03 2.1 9.3 0.8 2 23 281 303 280 303 0.89

3 12 0.85 60 4.8 2.5 1 23 307 329 307 329 0.94

4 12 0.0072 0.51 11.3 1.5 1 23 334 357 334 357 0.95

5 12 0.0011 0.078 13.8 0.1 3 23 363 384 362 384 0.97

6 12 0.14 10 7.2 0.1 3 20 394 411 393 413 0.94

7 12 0.029 2.1 9.4 0.0 2 23 425 447 424 447 0.94

8 12 0.11 7.6 7.6 1.0 3 23 455 476 454 476 0.95

9 12 0.00014 0.0096 16.7 0.7 2 23 496 517 496 517 0.97

10 12 1.4e-05 0.001 19.8 1.5 1 23 523 545 523 545 0.99

11 12 1.2e-05 0.00085 20.0 3.2 1 23 551 573 551 573 0.94

12 12 5.3e-07 3.8e-05 24.3 1.2 1 23 579 602 579 602 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.6e-05	0.0039	17.9	2.8	1	23	251	273	251	273	0.99
2	12	0.03	2.1	9.3	0.8	2	23	281	303	280	303	0.89
3	12	0.85	60	4.8	2.5	1	23	307	329	307	329	0.94
4	12	0.0072	0.51	11.3	1.5	1	23	334	357	334	357	0.95
5	12	0.0011	0.078	13.8	0.1	3	23	363	384	362	384	0.97
6	12	0.14	10	7.2	0.1	3	20	394	411	393	413	0.94
7	12	0.029	2.1	9.4	0.0	2	23	425	447	424	447	0.94
8	12	0.11	7.6	7.6	1.0	3	23	455	476	454	476	0.95
9	12	0.00014	0.0096	16.7	0.7	2	23	496	517	496	517	0.97
10	12	1.4e-05	0.001	19.8	1.5	1	23	523	545	523	545	0.99
11	12	1.2e-05	0.00085	20.0	3.2	1	23	551	573	551	573	0.94
12	12	5.3e-07	3.8e-05	24.3	1.2	1	23	579	602	579	602	0.98

Sequence Information

Coding Sequence: atgaatgatcAAGTGATATGTAGAATTTGTTTCGCATCAGACAATGTGAAGCTTTGCAGTGTATTCTCATTTGGTTTGTCTGAAGCATATGAAAAGTTTGTTGGAGTTaagaaCACCGATCAAGCGTGTCTACCagaatatatatgtagttattgTACCACATTGCTGTTCAAATGTTTGGCGTTCAGAGAGAAGTGTCACTCCGCGtacaattttatgaaatatgcaGCGGAAATTAATacACCTATAGACCAATTGGATGAAGCATCTAACTTTAATTTACCTTacacaataacaaataataatcaaataatacaCATAGAATATACAGAACCAAAGCAAATAAAACAAGAGTTTGTACCAGTCGTAGAAGTTAAAATAGAGAGTTGCGAACccaagaagaagaaaaagaagaagaaaaaagaagTAATACCAGTGAAAAGAGAGGAAGTGTTTAGCGATGAAGCTAATGATGATAATGATCATGTGGAACCGTTTAATGATACCCAAAACAATGAATCACATAATATTGATACTCAAACTAATGAATCACAACATAATGATGCTCAAATTGATAATAATGATACGCAAAAAAATGATTCCAAATTCAATGATACCCATAATGATATGGTAATGGAAACGCCAACACACGAACTGCTAGatgatgttaaaataataattttaagcataGAAGAgcaaattaaagaaatacaagATAGAAAGACATCGTCTAATTATTTGAATTCTTCGTACAAGTGCAATTATTGTTTCAAAGGATTCATGATGCCGTCCACGTTTAGGAATCACATGTTGAAACATGATCCGgaGAGAGGAGAGTTAAAATGTGATATATGCAAGTCCAGGTTCTCAGAGCTGCGAGCTCTCAGAGCGCATGTCGTGCACACACACGAGAGGAAGTATATATGCAAGTTGTGTGACCACGTGTCGAGGAGTAGtcatCGAGCAAAAGAGCACGCGAAATGGCACAACGGTTTTACCTTTTCATGTAAAATATGCGGAGCTACTTTCGCaaaatcgACAAGCCATCTAACTCACATACGTCTCCAGCATCCCTCCAACAACGCGTGTGATATATGCGGAGAGTCATTTATAGGAGAGTTTGGTCTCAAAATGCATAAACGAAAAGCTCATAGTTCGGACCCAAATCAGATCACTTTGTGTGCGCAGTGTGATTTCAAATTTGCCTCCGTTGAAGCATTATCCAAACATCTAGAATATTCTAAGGATGAAATGTGCCACGAGGATATGAAgccGTGTGCACAATGTGGTGAAGGTTTCGTATCTGAAGAAGTCTTGAACGAACACGTGAAGAACGAACACAAAGAGGAAGAAGCGGCTTTTTGTCAAGacTGTAAAAGCAGTTTCGCGTCAACCCGGTCGTACGAGATCCACTTCCAGCGCGTGCATCTCGGCGTGAAGCTGAAGCAGCGCAAGCGTGCAACGTGCACGCGCGGGGAGAGCGCCGTGTGCGAGGTGTGCGGGTACAAGTGTATTtcaAACGCAACATTAATATACCATCAAAGAACGCACACCGGAGAGAAACCGTACCAATGTACAGAGTGTCCCAAAAAGTTTAGTGTATTTCAAAGACTACAGATCCACCTGAGAACGCACACGGGGGAGACCCCCTACCAATGTCAACATTGTCCCAAGGCGTTCAAACATAAGGCGGCGCTCAACAGACATGACCGGGTACACACAGGGGCGAAGCCCTACACGTGTCCTCACTGCGGCAAAGCGTTCTCACAGTCTAACTCTATGAAGCTACACGTCAATACCGTACATCTAAAGTTACCGGCGCCGTACAGGAATAGACGacccaaaataaattaa
Protein Sequence: MNDQVICRICFASDNVKLCSVFSFGLSEAYEKFVGVKNTDQACLPEYICSYCTTLLFKCLAFREKCHSAYNFMKYAAEINTPIDQLDEASNFNLPYTITNNNQIIHIEYTEPKQIKQEFVPVVEVKIESCEPKKKKKKKKKEVIPVKREEVFSDEANDDNDHVEPFNDTQNNESHNIDTQTNESQHNDAQIDNNDTQKNDSKFNDTHNDMVMETPTHELLDDVKIIILSIEEQIKEIQDRKTSSNYLNSSYKCNYCFKGFMMPSTFRNHMLKHDPERGELKCDICKSRFSELRALRAHVVHTHERKYICKLCDHVSRSSHRAKEHAKWHNGFTFSCKICGATFAKSTSHLTHIRLQHPSNNACDICGESFIGEFGLKMHKRKAHSSDPNQITLCAQCDFKFASVEALSKHLEYSKDEMCHEDMKPCAQCGEGFVSEEVLNEHVKNEHKEEEAAFCQDCKSSFASTRSYEIHFQRVHLGVKLKQRKRATCTRGESAVCEVCGYKCISNATLIYHQRTHTGEKPYQCTECPKKFSVFQRLQIHLRTHTGETPYQCQHCPKAFKHKAALNRHDRVHTGAKPYTCPHCGKAFSQSNSMKLHVNTVHLKLPAPYRNRRPKIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00779701;
90% Identity: -
80% Identity: -