Basic Information

Insect: Philaethria dido
Gene Symbol: -
Assembly: GCA_033558755.1
Location: JAKGSA010000003.1:1807646-1813920[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0047 0.34 11.9 5.9 1 23 178 200 178 200 0.98

2 11 4.8e-05 0.0034 18.1 1.1 1 23 206 228 206 228 0.98

3 11 0.00013 0.0091 16.8 1.9 1 23 234 257 234 257 0.96

4 11 0.029 2.1 9.4 3.3 1 21 263 283 263 285 0.95

5 11 0.00062 0.044 14.6 3.8 1 23 291 313 291 313 0.99

6 11 2.9e-05 0.002 18.8 5.5 1 23 319 341 319 341 0.98

7 11 0.0068 0.48 11.3 0.6 1 23 349 372 349 372 0.96

8 11 0.005 0.36 11.8 4.5 2 23 379 400 378 400 0.96

9 11 0.00013 0.0091 16.8 2.3 1 23 406 428 406 428 0.98

10 11 6.1e-06 0.00043 21.0 1.7 1 23 434 457 434 457 0.95

11 11 6.6e-06 0.00047 20.8 4.8 1 23 471 493 471 493 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0047	0.34	11.9	5.9	1	23	178	200	178	200	0.98
2	11	4.8e-05	0.0034	18.1	1.1	1	23	206	228	206	228	0.98
3	11	0.00013	0.0091	16.8	1.9	1	23	234	257	234	257	0.96
4	11	0.029	2.1	9.4	3.3	1	21	263	283	263	285	0.95
5	11	0.00062	0.044	14.6	3.8	1	23	291	313	291	313	0.99
6	11	2.9e-05	0.002	18.8	5.5	1	23	319	341	319	341	0.98
7	11	0.0068	0.48	11.3	0.6	1	23	349	372	349	372	0.96
8	11	0.005	0.36	11.8	4.5	2	23	379	400	378	400	0.96
9	11	0.00013	0.0091	16.8	2.3	1	23	406	428	406	428	0.98
10	11	6.1e-06	0.00043	21.0	1.7	1	23	434	457	434	457	0.95
11	11	6.6e-06	0.00047	20.8	4.8	1	23	471	493	471	493	0.97

Sequence Information

Coding Sequence: ATGCCGCCAGATAAGAAAGGTGTTAACAAGGGCAAAACAATACTTCAatcctatttaaattcttttgaccaagaaaatgaaacaaCAACTGTGATAACAGtaaatggtAGTGGAGATGAAGAAGCAGACACAGGTGTTACCTATTTTGTTGATGAAGAAGGGCGCTATTATTATCAGCCCTCTGGAGATAACCAAAGCCTTGTCTCAATACCTACAGAGGTGGCACAAGATACTGAACagatttcagAGGAAACTCAAATGTTGGTTGATGCAGAGAATTATCAAACGGTAACATTGGTGCCGTCAGAATCTTCTAATGGTGAAGTCAGCTATGTTTTAGTTATGCAAGATGAAAATAAGCCAGTTATGAATATTGATATTAAGGTGGATCAGgAAGAAAAGAGCAATGATGTGTATAATTTTGATGAGGATGAAGAAGAGCCTGGTGGGGATGATGGTTCTGATGATGCAGATGAAGCACCCAAGgttAAATCATCTGCTTCAAAACGTGGGGACTATCTTCGGCCTCATTTTACATGCAATTTTTGCTCATATACAAGTCATAGGCGATATCTCTTACTTCGTCATATGAAATCTCACTCAGAAGAGCGGCCTCACAAATGCAATGTGTGCGAGCGTGGTTTCAAGACCATAGCATCTCTGCAGAACCATGTTAACATGCATAATGGAGTGAAACCACATGTATGCAAGTATTGCAAAAGTCCTTTTACTACCTCAGGAGAGTTAGTTAGACACGTTCGATATCGACACACTCATGAAAAACCACATAAATGCACTGAATGCGACTATGCTTCTGTGGAGCTGTCCAAACTGAGGCGCCATGTTAGATGCCACACTGGCGAGAGGCCATATCAGTGTCCTCATTGCACATATGCGTCTCAAGATACATTCAAACTGAAGCGACACTTGCGCACTCATACTGGAGAAAAACCATATAAATGTGAACATTGCAACATGTGCTTCACACAATCTAACTCCTTAAAGGCACACAAGCTAATTCataatgtGTCAGAGAAGCCAGTATTTGCGTGTGAGCTCTGTCCCGCAAAGTGTGGACGAAAAACCGATCTTAGAATTCACGTGCAGAAACTGCATACATCTGACAAACCTCTAAAGTGCAAACGTTGCGGCAAATCCTTCCCAGATCGATATTCTTGTAAAGTTCATAATAAGactcATGAAGGTGAAAAATGCTTCAAATGTGAATTGTGCCCATATGCATCAACAACACTGCGTCACCTCAAGTCGCATATGCTGAAACACACTGATGAGAAGCCTTTTGCTTGTGACCAGTGTGACCAATCCTTCAgGCAAAAACAACTTCTGCGACGTCATCAAAACTTATACCATAACCCGAACTATGAGCCAAAGCCACCCAAAGAGAAGACGCACACTTGCCACGAGTGCAAGCGCACATTCGCACACAAAGGCAACTTGATCCGTCACCTGGCTGTCCACGACCCTGAGTCTGACCACCATGAGAAAGCATTAGCCCTAAAGCTTGGACGACagaggaaaattaaaattgttgatGGTAATCTGAAGGGAGAGGACTCAGACAATGAAACAGAAATAATGAAACTCGACCTAAACAGCGAGTTGAAGCGTGGTGAGCTCGTCACAGTAGCAGACGGTGAAGGCCAACAGTATGTAGTGCTGGAAGTGATACAGTTGGAGGATGGCTCTGAACAGCAGGTGGCTGTTGTCGCACCTGACTATATTGATGAGGAACAAGTTGAGGAAGAAGAAGAGGATGATGAAGAAGATGAAATGGTACAAAAACAAGCATACATTGAGCAAGCCAAGATAAGGAATCTAGAGAGGAGCATCAAACTAGAGAAGGATGTTGATACATGTTTTGGATTTGATGAGGATGAGGaaggagaagaagaagaaataacCTATGATGATAAAGTAGTTTTGCGTTTAGTTTAA
Protein Sequence: MPPDKKGVNKGKTILQSYLNSFDQENETTTVITVNGSGDEEADTGVTYFVDEEGRYYYQPSGDNQSLVSIPTEVAQDTEQISEETQMLVDAENYQTVTLVPSESSNGEVSYVLVMQDENKPVMNIDIKVDQEEKSNDVYNFDEDEEEPGGDDGSDDADEAPKVKSSASKRGDYLRPHFTCNFCSYTSHRRYLLLRHMKSHSEERPHKCNVCERGFKTIASLQNHVNMHNGVKPHVCKYCKSPFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCPHCTYASQDTFKLKRHLRTHTGEKPYKCEHCNMCFTQSNSLKAHKLIHNVSEKPVFACELCPAKCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYSCKVHNKTHEGEKCFKCELCPYASTTLRHLKSHMLKHTDEKPFACDQCDQSFRQKQLLRRHQNLYHNPNYEPKPPKEKTHTCHECKRTFAHKGNLIRHLAVHDPESDHHEKALALKLGRQRKIKIVDGNLKGEDSDNETEIMKLDLNSELKRGELVTVADGEGQQYVVLEVIQLEDGSEQQVAVVAPDYIDEEQVEEEEEDDEEDEMVQKQAYIEQAKIRNLERSIKLEKDVDTCFGFDEDEEGEEEEITYDDKVVLRLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247446;
90% Identity: iTF_00781235;
80% Identity: -