Basic Information

Insect: Philaethria dido
Gene Symbol: -
Assembly: GCA_033558755.1
Location: JAKGSA010000005.1:4420641-4433390[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0012 0.083 13.8 0.0 2 19 189 206 188 207 0.95

2 13 0.91 65 4.7 1.1 3 23 252 272 250 272 0.89

3 13 0.036 2.5 9.1 1.2 1 21 278 298 278 299 0.95

4 13 4 2.9e+02 2.6 3.0 3 19 347 363 346 368 0.90

5 13 0.015 1.1 10.2 1.4 2 20 374 392 373 394 0.90

6 13 0.00045 0.032 15.1 0.3 1 23 402 425 402 425 0.95

7 13 4.4e-06 0.00031 21.4 1.8 1 23 445 467 445 467 0.97

8 13 5.2e-08 3.7e-06 27.5 1.9 1 23 474 496 474 496 0.98

9 13 1.1e-07 8.1e-06 26.4 2.3 3 23 508 528 506 528 0.96

10 13 6.9e-05 0.0049 17.6 3.6 1 23 534 556 534 556 0.99

11 13 4.8e-07 3.4e-05 24.4 1.5 2 23 563 584 562 584 0.96

12 13 1.3e-07 9e-06 26.2 0.8 1 23 590 612 590 612 0.99

13 13 0.0029 0.21 12.5 0.1 1 23 618 640 618 640 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0012	0.083	13.8	0.0	2	19	189	206	188	207	0.95
2	13	0.91	65	4.7	1.1	3	23	252	272	250	272	0.89
3	13	0.036	2.5	9.1	1.2	1	21	278	298	278	299	0.95
4	13	4	2.9e+02	2.6	3.0	3	19	347	363	346	368	0.90
5	13	0.015	1.1	10.2	1.4	2	20	374	392	373	394	0.90
6	13	0.00045	0.032	15.1	0.3	1	23	402	425	402	425	0.95
7	13	4.4e-06	0.00031	21.4	1.8	1	23	445	467	445	467	0.97
8	13	5.2e-08	3.7e-06	27.5	1.9	1	23	474	496	474	496	0.98
9	13	1.1e-07	8.1e-06	26.4	2.3	3	23	508	528	506	528	0.96
10	13	6.9e-05	0.0049	17.6	3.6	1	23	534	556	534	556	0.99
11	13	4.8e-07	3.4e-05	24.4	1.5	2	23	563	584	562	584	0.96
12	13	1.3e-07	9e-06	26.2	0.8	1	23	590	612	590	612	0.99
13	13	0.0029	0.21	12.5	0.1	1	23	618	640	618	640	0.98

Sequence Information

Coding Sequence: ATGGCTTCAAgtactacaaatattaaaatagaaaatttatgtCGAACGTGTTTatcaaaagaatataaaatgctTTCCATCTTTGAATTGCGTTTGGGCATTGAAACATTAGACAATATAATCACATCAATAACTGGTTTAAAGaTAGAGCAAGGCGATGGATTACCTTCTACAATATGTAATGAATGCAAAGAGAAAGTTTTAAACGCATATGACTTTAAAACTCGTTCAGAACAAGCTGAACTTACACTTAAAGGATTACTTACTAAAGAAAATGTTCAGcagaatagtaaaaataatgtagTTTTGAAGGCTAATTCTGTGGAAATAAAGACTGAACAATTTGTACGAGACAATCATGATGAATATATGGACTTAGATTTATCATTGGCTCTTAGTAATGTTGAAGAAACTTTTAATGATATAGatgCTGTAAAGTGTGAAGATGAAACAAAGAGCAAAGATTCTGTTACCAATATTCAACAACCTGAAAGTTCTACCTTAAAATTTGAAGTCACGCAACAACTTTCAAAtaCTGAGGAAAATGTTTGCAATGACAATACATATTGCCCTGTTTGTGGATTAGGTTTCTCAGATGCTGAGGGCCTTACAAAACATGCCTGGGAGCTACATGCGGATGTCATGGGGCCCAAAAAGAGAGGCAGACCAAAAAAGTTACTTACTAGTaCTATTCTCAATAAATTATCAGAAAATGAGTACAATGTGAAATATTTGCCAGATTTAAAGCACATTTGCATATTTTGCAAAGaagatttcaaaataaaacagGATTTATTATCCCATATATTGCAACATAAAgATGTCAAGGTGTTCAGTTGCTTAATTTGTGAAAGGATGTATCTTAAGAAAAGTGAGTTGGAACGACATCAGTGTTTACAGATACAGAACGATCACAGCAAGCAAGGCGAGCCTCCAGATGTACAAGGGACTAATAGCAAAATTGGTCTATTTAAAGAAACATTAATTCGGGACATATTGCTGAGTAATGCTGACacgGAATTGGGATCTATGGAGTTATGTGAGGAATGTGGTGAAATCTTCTTCTGCAGGGCAGACCTGACTAAACACTGTGACCGTGATCACCCTGAACTGTCCTGTCGATGTCATCTTTGTgataagATGTTCGCGACGGTGAAGAGCGCGGCGCGACACCGGTCGGTGTGCGCGCGCGTGGAGCGGCTGTTCGCGTGCGCGTCGTGCGGGCTGCGGTTCGCGCACGAGGTGTCGCTCAACAAGCACATCCTGCGCGCGCACGCCGGACAGAGCGTCTCCGTGCGCTTCATGGACAAGGACCGGGAGGCGAGACCGCAGCACACCTGCGACATATGTAACAGAACATTTTATAGAAAGGACTTACTAGCAAGACATGCAAAAATACACAAACAAATAGAGAAGTGTTTTGAGTGTGATGTGTGCAAAAAGAAATTCAACAGAAGAGATAATCTAAGATCGCACATGAGAGTTCACAATGGATACGGAACCAGCACGAACACGTGCTTATGTTTATATTGCGGTAGAAGCTTCTCGAATTCCTCAAACCTCATAGTCCATATGCGGCGACACACCGGCGAGAAACCTTACAAGTGTGACTTTTGCGACAAAGgtTTCCCCCGTTCGTCGGATTTGCAGTGCCATCGTCGCTCCCACACAGGGGAAAAGCCTTGTATATGCGGCGTTTGTGGCAAAGCGTTTTCGCGTAGCAACAAGTTGTCGCGTCATATGCGGGTGCACACCGGCGTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCACAGAGCAACGACCTCACGCTACACGTGCGCCGACACACCGGCGACAAGCCCTACGTCTGTGAACTGTGTGGAGACAGATTTATACAGGGTACAGCACTGCAGAACCACAGACGGGCGCACGGCCACTACCCGCAGGCCACCGCTCTGCCTCTCATGTACACCGTGCAGACCGTCGCGCAGACACACTGA
Protein Sequence: MASSTTNIKIENLCRTCLSKEYKMLSIFELRLGIETLDNIITSITGLKIEQGDGLPSTICNECKEKVLNAYDFKTRSEQAELTLKGLLTKENVQQNSKNNVVLKANSVEIKTEQFVRDNHDEYMDLDLSLALSNVEETFNDIDAVKCEDETKSKDSVTNIQQPESSTLKFEVTQQLSNTEENVCNDNTYCPVCGLGFSDAEGLTKHAWELHADVMGPKKRGRPKKLLTSTILNKLSENEYNVKYLPDLKHICIFCKEDFKIKQDLLSHILQHKDVKVFSCLICERMYLKKSELERHQCLQIQNDHSKQGEPPDVQGTNSKIGLFKETLIRDILLSNADTELGSMELCEECGEIFFCRADLTKHCDRDHPELSCRCHLCDKMFATVKSAARHRSVCARVERLFACASCGLRFAHEVSLNKHILRAHAGQSVSVRFMDKDREARPQHTCDICNRTFYRKDLLARHAKIHKQIEKCFECDVCKKKFNRRDNLRSHMRVHNGYGTSTNTCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCDKGFPRSSDLQCHRRSHTGEKPCICGVCGKAFSRSNKLSRHMRVHTGVKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQGTALQNHRRAHGHYPQATALPLMYTVQTVAQTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00621401;
90% Identity: -
80% Identity: -