Basic Information

Gene Symbol
CDC5L
Assembly
GCA_033558755.1
Location
JAKGSA010000248.1:24576-31786[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-17 3.3e-14 53.1 1.8 2 46 9 54 8 54 0.97
2 2 3.6e-12 3.9e-09 36.9 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGCGAATTATGATAAAAGGAGGTGTTTGGAGAAACACTGAGgATGAAATTCTCAAAGCAGCAGTAATGAAATATGGTAAAAATCAGTGGTCCCGTATTGCTTCTCTGTTACATAGAAAGTCTGCAAAGCAATGTAAAGCTAGATGGTATGAGTGGTTGGACCCAAGCATTAAGAAAACAGAATGGTCACGGGAAGAAGATGAAAAATTACTACACTTGGCGAAGCTTATGCCTACCCAATGGAGAACAATTGCCCCTATTATTGGGCGCACTGCTGCTCAATGCTTGGAACGATATGAATATTTACTGGATCAAgctcaaaaaaaggaagagggtGAGGATATGGGAGATGACCCTCGTAAACTTAAACCTGGTGAGATTGACCCAAATCCTGAGACAAAACCAGCTAGACCGGACCCTAAGGATATGGATGAAGAtgAACTTGAAATGCTTTCTGAAGCTCGAGCTCGTTTAGCAAACACACAAGGAAagaaagctaaaagaaaagCCAGAGAAAAACAATTAGAAGAGGCTCGTAGGCTTGCAGCATTACAAAAGAGAAGAGAACTCAGTGCTGCTGGAATTTCAGTACCTCTTAGACGCAAACGTAAGCGTGGAGTGGATTACAACTCTGAAATACCATTTGAAAAGAAACCAGCATCAGGTTTTTATGACACATCAACTGAGGTTGTAGATCCCATGGCACCAGATTTCTCTAGGTTGCGACAACAACATTTGGATGGGGAATTACATTCTGAGAAGGAAgagAGAGAACGCCGAAAAGATAAGCAAAAACTGAAGCAACGTAAAGAGAATGATGTTCCCCAAGCTATGCTGCAAGGTGACCAGCCAGCAAGGAAACGTAGCAAACTTGTTCTGCCAGAGCCACAAGTTTCTGACCAGGAACTCCAGCAAGTGGTGAAGCTGGGTCGCGCGTCGGAGGCGGCGCGGTCGAGCGCGGGCGAGGCGGGCGCCGCCACGGACGCGCTGCTGGCGCACTACGCGctcgcgcccgcgcccgccacCGCGCTGCGCACGCCCGCGCACGCGCACCACCACCACGACAGAATTCTTATGGAAGCTCAAAACGTGATGGCTCTAACACATGTGGATACTCCGCTTAAAGGCGGTCTCAACACTCCACTACACGAATCGGACTTCTCTGGAGCTTTACCTCAGAGCCAAGTTGTTGCTACACCCAATACTGTACTCGCCACTCCGTTcagATCCACACGTAGCGAAGTATCGACTCCAGGCAGTTTCGCCACTCCCGGACATGCAACTGGTCAGCAAGGACTCGTGacGCCGGGTCTAAGGGATAAGCTGAGCATTAACCCAGAAGATAGATTGAGTACTGGCGAAACCCCTCAGCAGAATAATCAGgtTGCAGCTTCGGTGCGCACCGCGCTGCAGGCGCTGCCGGCGCCGCGCAACGACTACGAGATCGTGGTGCCCGAGCACGAGCGCGGCGGAGACgagcccgcgcccgcgccgccgATAGAGGACCAGGCCGACAGGGACGCGCGCGCGCTGCAGGACGAACACGAACGACGGCAGGCGGCGCTGGCGCTCCGCAGCAGCGCGGTGGTGCGCGGGCTGGCGCGGCCGGCCGACgtggcggcgggcgcggcgcgCGCGGGGCCGCTCACGCCGCTGCAGCGCGCCGAGGAGCTGCTCAAGGCGGAGATGCTCACCATGCTGCACTACGACGCGCTGCAGGACCCGCCTGACGgtcatattatacttatttcttaA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGISVPLRRKRKRGVDYNSEIPFEKKPASGFYDTSTEVVDPMAPDFSRLRQQHLDGELHSEKEERERRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVSDQELQQVVKLGRASEAARSSAGEAGAATDALLAHYALAPAPATALRTPAHAHHHHDRILMEAQNVMALTHVDTPLKGGLNTPLHESDFSGALPQSQVVATPNTVLATPFRSTRSEVSTPGSFATPGHATGQQGLVTPGLRDKLSINPEDRLSTGETPQQNNQVAASVRTALQALPAPRNDYEIVVPEHERGGDEPAPAPPIEDQADRDARALQDEHERRQAALALRSSAVVRGLARPADVAAGAARAGPLTPLQRAEELLKAEMLTMLHYDALQDPPDGHIILIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00776677;
90% Identity
iTF_00776677;
80% Identity
-