Pdid010106.1
Basic Information
- Insect
- Philaethria dido
- Gene Symbol
- -
- Assembly
- GCA_033558755.1
- Location
- JAKGSA010000492.1:42479-45719[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-10 4.2e-07 29.9 0.2 6 37 34 65 32 70 0.94 2 2 2.2 2.3e+03 -1.2 0.0 9 20 65 76 65 76 0.84
Sequence Information
- Coding Sequence
- ATGCCCTTAGTTGTCTCAGGGGGCGCCGCGCCGCTCCCTGAGACAACTAAGGGCATCTTCTCATCACGGCGGCGCCCTGTTCGGTCCGCCAGTGCCACACAAGCAGCAATCTATGCTGTTTTAAGCAAATCAGCAGGTTACAGAAAAGCAGCCCAGCCATACGGTGTTCCACAGACCACTTTGGAGCGTCACGTGGCCAAAATAAGGAAGGGTGAGCTCTCTCTCAACTCAACTCCAGGTAATTTTAAACCAGTATTTTCGAAACAAGAGGAAGATGAGCTCGTCAGGTTTATTAATGAAATGGAAAAACGTTTAATTGGTTTGACCACCGTCGTTCTACGAAAACTAGCGTATCAGTTGGCGGAAAAAAATGGCAAGGCACATAATTTTAACCACGAAAAAGAGATAGCTGGCGTACATTGGATGAACGGATTTTTGAAGCGTCACCCGTATTTATCCATCCGAAAACCAGAAGCAACATCGGCAGCACGAGCTATGGTTGTGGATAAATTCTACTCTTTGCTTGGGGaaatatatgacaaatataATCTGACGCcagacataatatataattgtgaTGAGACAGGAATATCATGTGTGTCTAAAACAAACAGCAAAATTATTGCAGAGAAGGGAAGAAAACAGGTAGAATCACATTCATCAGCACAAACGAGGACAAACGATTACGGTTGA
- Protein Sequence
- MPLVVSGGAAPLPETTKGIFSSRRRPVRSASATQAAIYAVLSKSAGYRKAAQPYGVPQTTLERHVAKIRKGELSLNSTPGNFKPVFSKQEEDELVRFINEMEKRLIGLTTVVLRKLAYQLAEKNGKAHNFNHEKEIAGVHWMNGFLKRHPYLSIRKPEATSAARAMVVDKFYSLLGEIYDKYNLTPDIIYNCDETGISCVSKTNSKIIAEKGRKQVESHSSAQTRTNDYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -