Pdid014055.1
Basic Information
- Insect
- Philaethria dido
- Gene Symbol
- -
- Assembly
- GCA_033558755.1
- Location
- JAKGSA010000748.1:123305-127572[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-12 3e-09 36.8 0.0 4 37 190 224 187 226 0.92
Sequence Information
- Coding Sequence
- ATGAACGAAGatgataatattatgatttctgAATATTTGTGTAGATGCAAATGCTGTTTAAACGATAAAGAATTGAAAAGTTTGTGGGACGTGCATGAGAATGATGGCGGTGAAGAAATATATGGGAATATGATTGTTGAGTGTTTTGGGTTACCGtgGGTACCCTCCGATGAACCTGAACATATATGCaacatatgtattataaaactttGTGAAGCACttgattttaaaagaaatatattagctATTGAAGATGTTCTGCTAAATGACGTAGATATTAAAGAGGAAATAGACAGTCAGTCAGATATAACATCGTCCACAACACTAGTTAAATATGTTCCAATAAAAGAAGAATTTGACCATGTTGAATATTTGGAGTACGAAGAAACACCTGAATATACGCctgAACCACCACAACTAAAAATCTTAACAGAATTAGCTAATACAAGTTCAGGCCCCTCGACCCCAGGGGCCTCGAGCTCAGGGCCCCCCAGTCCAGCAAGAAAGTGGCccaaaaagaagaagaaacatGAATTGACAAAATTCTACAAGCAATACACTAAACAGGATTTGGCTGAAGCAATAAGAGTAGTTAGGAATGGGGAAATGAGTTGCGCAAACGCAGCTGTCAAATATGGCGTCCCGAAGAAGACTTTGACAGTTAAGGTTAACTCGTTTAGTGATTACGATGGCGATGATGCCAGCAACAAACATTACAAATTAATAGAAGAGATCAAAGTGCTACTAACACACACAACCGCTGTGCCTTTTAAAACCAAAACAACTAGATACTACTGTTTCTACTGTTCCACTGAAGGCCCATACTTTGAGGATACAGACGAGCTCAGGGAACATACAAAAACTGAGCACGAACATGAGTGGACcaaaatagaattatatatgAGACCTCAATGGTTGAATGAGGTGATAAAAATGGATGTCCAAGACATGCATTGCAAGATATGTCAGACAATGTTGCCAGATTGGAACAATCTGTTTGTCCATTTAGCGGTAACACACAATCTGGAGTTTGACATGGCCTACACTAAAATTATACCATATGCCTTAAgttctaatttaaaatgttttctatGTGGCCAGAGTTTCCACAATTTTGGACATTTGGACAGCCATATGAATAATCactatagtaattatatatgcTATGAATGTGGAGATACCTTTTTATCAGCAAGTCGCTTGGATAAACATCTTAGTGTCCACAAAATAGGCAATTATCCATGTAAATATTGTGATAAGGTTTTCAAATTAGAGAAATATAGGGCGAAGCATATAAGTTTAGTCCATATACAAGAGAACACAGTCAAATGTTTGTACTGTCCGGAGAAATTCCTAGGCATATTCCAGAGGCATGTACATGTGACTGAAAAACATAAGGAGAAAGTCAAATACATGACATGTGAGTACTGTGGCAATACATATACATGGAAACCATATTTTCTAGCTCATATTAAAAGAAGGCATGGTTCAGAGAAGAAGTACAAGTGTAAATATTGTGAGAAGTGCTTCTTGATGAAATATGAGTTGAAAAATCATATGGTCAGGCATACGGGGGAGAAGAATTTTGTATGTGGTCTGTGCGGCTTGGGTTTTACTAGGATGATGAGTTTGAAAAAGCATTGTTCAACTCATGAAGAGGAAATTATTGAATGA
- Protein Sequence
- MNEDDNIMISEYLCRCKCCLNDKELKSLWDVHENDGGEEIYGNMIVECFGLPWVPSDEPEHICNICIIKLCEALDFKRNILAIEDVLLNDVDIKEEIDSQSDITSSTTLVKYVPIKEEFDHVEYLEYEETPEYTPEPPQLKILTELANTSSGPSTPGASSSGPPSPARKWPKKKKKHELTKFYKQYTKQDLAEAIRVVRNGEMSCANAAVKYGVPKKTLTVKVNSFSDYDGDDASNKHYKLIEEIKVLLTHTTAVPFKTKTTRYYCFYCSTEGPYFEDTDELREHTKTEHEHEWTKIELYMRPQWLNEVIKMDVQDMHCKICQTMLPDWNNLFVHLAVTHNLEFDMAYTKIIPYALSSNLKCFLCGQSFHNFGHLDSHMNNHYSNYICYECGDTFLSASRLDKHLSVHKIGNYPCKYCDKVFKLEKYRAKHISLVHIQENTVKCLYCPEKFLGIFQRHVHVTEKHKEKVKYMTCEYCGNTYTWKPYFLAHIKRRHGSEKKYKCKYCEKCFLMKYELKNHMVRHTGEKNFVCGLCGLGFTRMMSLKKHCSTHEEEIIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457174;
- 90% Identity
- iTF_01182268;
- 80% Identity
- iTF_01182268;