Pdid000129.1
Basic Information
- Insect
- Philaethria dido
- Gene Symbol
- F52C9.6
- Assembly
- GCA_033558755.1
- Location
- JAKGSA010000003.1:1563925-1569253[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8 3e+03 -1.6 0.1 30 42 132 144 132 145 0.89 2 2 1.8e-15 2e-12 47.0 0.0 2 42 971 1012 970 1015 0.94
Sequence Information
- Coding Sequence
- ATGAGAGTTGACCTGATGATTGTTGCACTGGAGTTTGGGGAGTGTGTTGTGTTTCTGATGGTTGGGTTACGAAAACGGTATCTAGCAGAATTAACCTTAGCTCTAGAAAACATACATTGGTCAATACTGGGACTTAGTGAAGTACGACGTCTAGGGGAAAACATAGAGGACTATGGAGACTTTATACTGTACTACAAGGGAGACACACCAGGCCAGTACGGAACCGGATTTATGATTAAAAAGGTATTAAAACCATATATTGATGAATTTATTGGAATATCAGAACGTATTGTAATTCTTAACTTAAAGTTATcgcctaaaaatgaaaaatggtcATTTGTTCAAGTTTACTCTCCAACTGAAAAGTCTGATAAATCTGAAATCGAGTCCTTTTACTCTACACTATCAAATGCAATAAAAACTCACACGCACAATAACTTAATAGTAATGGGGGATTTTAATGCTAGAATCGGCGAAAGAAGAGACGGAGAAGAAATTGTACTGGGCCCGTATTCGTCGGGGATAAGGACAAGAAATGGTGAAATGCTGATGCAATTGGCCTACGAAAACAACTTAGTAATACTAAACAGCTTATACAAAAAGCGTAATAACAATAGATGGACATGGATACATCCGGATGGCTACCATAAGAACGAGATAGACTATATCCtaacaaataaaagtaacaaCTTTCAAGATTGTAGagttataaacaatataaattttaacagcaATCACAGAATGGTTAGAGCAAAATTACAGGTTAATATAATCAAGAGGAACCGGCATTTTATGATGaagaaaagcaaaaatatagttttagaaAATACAGAGATATTGAAAGAAAAACTAGAAAACTTCATAGAACATACAAAGAATGACgatctacaaaataaatataacacatttcAAGGTCTACTGTATACAGATAGAAGAACTAAAAGTGAATGTgacaataagaaaataaattggaTAGGAAGTCAAACTAAAGAACTACTACAATACAGGACAGACCTAATATCAAACCCTAACAAGTCAAAAGCCATAAGAAAAGAAATAGCCCACAttagtaacaaaattaaaacacaAATGAGAAAAGATCGTCAGAGATACAGACTGGTACTACTTGAAGAATGTATACAAAGAACAGGCGGCATTAAAAAAGCAACCAAACAATtattagaaaaagaaaactggatctataatttgattaataagaataaaattggCAAAAGTCGCCCAGAAATAATGTCTATAGCTACTAATTACTTTACAGAACTGTATGAAGGAGAAAGTAGTTCACGAGTAACAAACCTAACCAAAGCAAGTGAAGTACCGGACATAATCTCTACAGAAATTAACAAAGCTATTAACTCTCAAAAGAAGGATAAAGCCCCAGGATCAGATGGCATTACCAACGATAcagcaaaaattaaattagagaAAGAGggtaaagaatttaaattaagaagAGGTGTACGCCAGGGTGACCCTCTCTCACCGAAACTGTTTACAGCTGTTCTGGAAGAGGTGTTTCGTCAGTTAGATTGGGCAAAATGTGGACTGACCATCAACGGTGAAAACCTTTCTCATCTAAGATTCGCGGATGATTTGATAATCCTCTCAACGACGAGTAGGGGTCTGCAGATGATGCTTAATGAACTAGATATAGAAAGCCAAAAGGTAGGATTACTCATGAACACACAAAAAACTAAAGTCATGACAAATGGGAACCAAGAACCTATCAGGATCAATAATAATCTGATCGATTATGTTGATGAATACATATACCTAGGTCAAATAATTTCTCCCATAGATCTAACCAGTAAAGAAATTGATAGGCGTATCGGAAATGCTTGGAGACAATATTGGAGTCTgaaagaaattatgaaaaacaatGAGACCAAGATAAATATCAAACGGAAACTATTTGATACTTGTATACTTCCTATACTTACTTATGGTTGTCAAACCTGTGCACTCACAAAAACCCACTACAAGAAGCTTGAAACATGCCAGAACTCcatggaaagaagtatgctAGGGAAAAGACTGTCCGATAGAATTAGAATTGATACTAttagaaaacaaacaaaaacaaagaatgttgtcaaaacaataaaaaggctTAAGTGGAAGTGGGCAGGCCATACTATAAGAGGAAGAGAAAAATGGTCAAAATTAGTAATGAACTGGTTCACAAAtgacagaaaaagaaaacaggGCAGACCCGTTAGACGTTGGGTTGATGATATCAAGACCATAGCAGGTGAGTCATGGACAAGAGCAGCTACAGACAGAAAAGAATGGCAACAATTGGAGGAGGCCTATGTCAACCAgCGTAGAGTGAGTTCTACAGGTTCAGTGGGAAATTTAGGTGTAGACGACAATAGGAGCAATGATTGTGGACAAAATATGGAAATGTTGCGTGAGGCAGTTACATTAAGCAGTGTGCCACAACATAAACGTAGGGAAATGGATGACCGATTAGATAACTCACAACAGactGGAGAGTCATCAAGCATAAATATAGATCAACTTGCAATGGATGCAAATTCCGCTGTCGGCATGTCACAAGGCCAATGGAGTATGCTGGAGCATACATACCCGCGGTATACGAACGCGTGCCTCGGCGGCGGCGCGCTGCAGCCTGACCAGGGCATGTACCTCAACAACGTGATGAACCCGCACGCCGACGCAGACCTCGCTACATACGGACAGGTGCTCGGTATGGCGGGGCCCGCGCCCGGCCCCAGCTGCGGCGGTGGCGGTGGCGGCGGAGCAGGCGGAGCcgggggcggcggcggcggtggcGGGGTCGACGGCGACCCCGGACACCCCGGACACCCCGGGCACCCAGTCAGTACGCAAGCCCCGCAAAAGCGGCGGCGCACCACCAACCCGCAGGCCGAGGAGAACTTTCAGCGCGCCCTCGAGGCGGTGCGCTTCGGTGGCATTGGGTTCTGTAAGGCAGCGCGCATGTTCGGCGTCAACAACCGCACGCTGTGGCTGGAGTACAAGAAGAAGGGCTACCCCAACAACCGGCCGAGCATCAAGAGTCGCATCAAGCGCGAGCACGTGACGCCGCCGCCCAAGGAGGAGCCGCCGCAGCAGGACGCACAGATGGCGCTGCTGTGCCCGCCGCACCCGGTGCCTGTAGGGTTCATCGACCCACGGCCGGTGGAGTTCCCGATGCAGGTGTCGCCGCTGAACATCAACATCAACGGCGTCAACTTCCCGATGCAATAG
- Protein Sequence
- MRVDLMIVALEFGECVVFLMVGLRKRYLAELTLALENIHWSILGLSEVRRLGENIEDYGDFILYYKGDTPGQYGTGFMIKKVLKPYIDEFIGISERIVILNLKLSPKNEKWSFVQVYSPTEKSDKSEIESFYSTLSNAIKTHTHNNLIVMGDFNARIGERRDGEEIVLGPYSSGIRTRNGEMLMQLAYENNLVILNSLYKKRNNNRWTWIHPDGYHKNEIDYILTNKSNNFQDCRVINNINFNSNHRMVRAKLQVNIIKRNRHFMMKKSKNIVLENTEILKEKLENFIEHTKNDDLQNKYNTFQGLLYTDRRTKSECDNKKINWIGSQTKELLQYRTDLISNPNKSKAIRKEIAHISNKIKTQMRKDRQRYRLVLLEECIQRTGGIKKATKQLLEKENWIYNLINKNKIGKSRPEIMSIATNYFTELYEGESSSRVTNLTKASEVPDIISTEINKAINSQKKDKAPGSDGITNDTAKIKLEKEGKEFKLRRGVRQGDPLSPKLFTAVLEEVFRQLDWAKCGLTINGENLSHLRFADDLIILSTTSRGLQMMLNELDIESQKVGLLMNTQKTKVMTNGNQEPIRINNNLIDYVDEYIYLGQIISPIDLTSKEIDRRIGNAWRQYWSLKEIMKNNETKINIKRKLFDTCILPILTYGCQTCALTKTHYKKLETCQNSMERSMLGKRLSDRIRIDTIRKQTKTKNVVKTIKRLKWKWAGHTIRGREKWSKLVMNWFTNDRKRKQGRPVRRWVDDIKTIAGESWTRAATDRKEWQQLEEAYVNQRRVSSTGSVGNLGVDDNRSNDCGQNMEMLREAVTLSSVPQHKRREMDDRLDNSQQTGESSSINIDQLAMDANSAVGMSQGQWSMLEHTYPRYTNACLGGGALQPDQGMYLNNVMNPHADADLATYGQVLGMAGPAPGPSCGGGGGGGAGGAGGGGGGGGVDGDPGHPGHPGHPVSTQAPQKRRRTTNPQAEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPKEEPPQQDAQMALLCPPHPVPVGFIDPRPVEFPMQVSPLNININGVNFPMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -