Pcor017319.1
Basic Information
- Insect
- Pherbina coryleti
- Gene Symbol
- Mblk-1
- Assembly
- GCA_943735905.1
- Location
- CALSEP010000576.1:9709-25659[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-15 4.7e-12 46.6 0.0 2 45 42 86 41 86 0.95 2 2 1.7e-18 3.4e-15 56.7 0.0 1 43 575 618 575 620 0.95
Sequence Information
- Coding Sequence
- ATGGTAAATTATAAGGTAGGGCCGAGTCGCTCAGTGCCCTCACGCGTCAACGAAGAGTGGATAGTGAAAAGATCAAAGCCGTCACGTGCGACGCCAGTGCCAACAGGTCGCCGCACCTACAGCGACGATGATCTTAGCAATGCTTTACAGGACATCATCAGCGGTAAGCTGGGTACTCGAAAGGCGGCGGTGCAATATAACATACCACGCTCAACACTTCGCAACAAGGTCTACAAGTTGACCATGGACGAGAAACGTTCCAATGCTCCAGCACCAACTGAGTTATTGCAACATCTGCATCAGGAACTGGAGCTGGAACGAGATACACATTCCGGGGATGAGGAGGAGAGCAACGACTCGACGCCACAAGTAGATGCAACGCAACCACAACCCTCACCATTGCTTGATGATCTTGCCAGTCGCATTGCTGCCTCGGCAACTCTGCGTAAACTCTGCGAAAGCAACAGCCTCGAGGATGCGCAGCACAATGCCAGTGTCTCACCCAAGCCGTCACCAACCCCTACAGCCGCATCACCACTCGATCAGCTTAAGCGTCAGGCTGGTCAGACTCTGCAAGCACCTCCACAGACTTCACCTCAGCCACAAATGGCGCCTATTTTAATAGACCCCAATGTGCTGCTACAAACGCTGCTACTCTCTGCCGGCGCCCTACAAAACTCCGCCAACTTGCAGCCCAAACTAGATGAAACCGTTACGCTGCGCGATCTCTTTGGCGCTATTCTCTTCAACTCAGGCGTTAATTTAAAAGATGCCTTGACGGCGGCAGCAGCTTCAACTCCCTCCACCACTGGTGACACTCTCAATAACGGCAGCGGAAAACTACCAAACATGATCGATCAGCGGCTTTTGCTGCAACAGCTTCAGCAGCAAGCCTCACCAGCATCTGCGCATTCGCACTCGCACTTTCCGCATCGCCTGCCAAAGTCTGAAACACCGGAGACCAGCTCATCGCTGGATCTTAACGAAGCGAGTGACGATCCGTCGGTAATCTTAAAAATTCCGTCCTACAAGCCCGTAGTTGGATCATCGTCGTCAGCTGCTCAGGTGAACGCGATACCGACAAGCTCTGCCCAGTCACCCTCTGCGGCACAACAATGCAGCACCAACGCCAGCACAAATCGCAACGGTGACAGTCCGCACTCGCAACGCTCGGCTCAATCACCGCGCATCGCCACCTCCATGTTGGCCGCAGCAGTGGCTGCTGCTGCTGGTGGTGGTAACATCACATCAGCGCATCAACAGCCCAACAACATATCAGTTATCTCGCCGCCTCTAATGCGCCACAGCTTAAGCGCTGATTCCCAATCGCCACCGTCGTTTTCACTACGCGATGTAATCGCAAATAGCATCCACCGCACCATGAATGAACAGGCCAATAAAGATGCACATGCGGCCGCTGCTTCCATGTTGGGCCTGGGTGCAAGCAGCGATTCAGAGCGCAATGCTGGTAACGACTACAAGACTCCTAGCATCTCGGTGGTAAAAAATATCGGTGGCACAGACACGTCACGTTTTGGCAAGGCACCTAACTTGCTTACCGGCAGCATGGCAGGCCACAACTCGCATCATCATCACCATCACCACCAACATCATCATCTGCAACATGCCCACCATTCAACGCACCATCTCAGCAGACAGGAAGCAGCTGCACTAGCTGCTGGCAAAGGCACACGACCGAAACGTGGCAAATATCGCAACTACGACCGCGACAGCCTAGTCGAAGCGGTCAAGGCTGTGCAGCGTGGCGAGATGTCGGTGCATCGTGCTGGCAGCTACTATGGCGTGCCACATTCAACGCTGGAGTATAAAGTCAAAGAGCGGCACTTGATGCGTCCGCGCAAACGTGAACCTAAGCCGCAACCACTCGATGGAACTGCCACCACTTCCTCAGCATCTAAATCCAACTCAAACATTCCAGGCCACTCGACAGCAAATAATTTGGACAAACTAAAGGGTAACGCATCCAATCTCTCGTCTAACTCAAAGCTCAGTGGTGCGCTAAAGAATAACAGCGGTGCAGCGACATATGCGAATACATCGCCAAATGGCATGAAACTCTCCATGTTCGATCCGAATGTGGCGGCGGCGCAGATGCAGTATGCACCGCATCTCTTCTGGCCACACTCTGCAGCCGCCTTTGGTCCCATGCAGATGGACTTTAACCGCAACGCAGCACAAAGCAGCAACACCGCAGCCAATGCCAATTCTGCGGCCGCAACACCCAGTGGAAGTGCTTCGACCTACGTTAACGCCGACATTCTGAAATCACATATCCAACGCTACCAGGAGGAATCGATGCGAAGTGCGTCAGCTAGCTCGACGAACGCTCATAAGTCCGCACACACGCCCAGCCCCATAGCTAGTCCGATGCCTGGTCAGAACCATCATGCGCTTAGCTACAAAAGCGCGCGAGAACTGGCGGATAATATATACGATAGTGGAGGTAATGCGAACGGCTCCGCCTCGTCCTCATTTCTTGACGGCATCATACGTAAGACACTTGATCGCAAGAGCAACGATGTGGCGCCACCACCAAACAGTGGTGCCCTGCTCGATCAGCTGCTGGTAAAGAAAATACCGTTGCCATTCACCAACAACCGCAGCAACGACTATGCCACGACATCAGGCGCAACGCTGAAACGCTCTGCCAGTCCGCTAACACCAGCCTACGCTAGCATGGACATCAAGCGTGAGCGTAGCAGTCCGCTCAACAGTGATGAGGCATCCAATAGTGAAGCGGACGAACACAACAATAATCGACTGGCAGGTGGTACCGATGGACGCAGTTGCGTTTCGTCTAGACTAGCTCAACAACGGAATCGCATGACGTCACGCGACTCAGACACGGATGGCAGCAGCGGCAGCCTAAAAACCGCCATGCCGTCGGAGCTCCTAACTAGTCAACACTATAACAACAGCTTAAGCACCAACATCACAGACCTTAACGGTGGCGCAGCGTCGAAGCTGGACATCGGCAGCGTTGGCACCTCGATACTGCAAGAAAAGCTGGGTCAAATTAAGGCGGAGCATGACAGCGAGGAGAATTTATAG
- Protein Sequence
- MVNYKVGPSRSVPSRVNEEWIVKRSKPSRATPVPTGRRTYSDDDLSNALQDIISGKLGTRKAAVQYNIPRSTLRNKVYKLTMDEKRSNAPAPTELLQHLHQELELERDTHSGDEEESNDSTPQVDATQPQPSPLLDDLASRIAASATLRKLCESNSLEDAQHNASVSPKPSPTPTAASPLDQLKRQAGQTLQAPPQTSPQPQMAPILIDPNVLLQTLLLSAGALQNSANLQPKLDETVTLRDLFGAILFNSGVNLKDALTAAAASTPSTTGDTLNNGSGKLPNMIDQRLLLQQLQQQASPASAHSHSHFPHRLPKSETPETSSSLDLNEASDDPSVILKIPSYKPVVGSSSSAAQVNAIPTSSAQSPSAAQQCSTNASTNRNGDSPHSQRSAQSPRIATSMLAAAVAAAAGGGNITSAHQQPNNISVISPPLMRHSLSADSQSPPSFSLRDVIANSIHRTMNEQANKDAHAAAASMLGLGASSDSERNAGNDYKTPSISVVKNIGGTDTSRFGKAPNLLTGSMAGHNSHHHHHHHQHHHLQHAHHSTHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGTATTSSASKSNSNIPGHSTANNLDKLKGNASNLSSNSKLSGALKNNSGAATYANTSPNGMKLSMFDPNVAAAQMQYAPHLFWPHSAAAFGPMQMDFNRNAAQSSNTAANANSAAATPSGSASTYVNADILKSHIQRYQEESMRSASASSTNAHKSAHTPSPIASPMPGQNHHALSYKSARELADNIYDSGGNANGSASSSFLDGIIRKTLDRKSNDVAPPPNSGALLDQLLVKKIPLPFTNNRSNDYATTSGATLKRSASPLTPAYASMDIKRERSSPLNSDEASNSEADEHNNNRLAGGTDGRSCVSSRLAQQRNRMTSRDSDTDGSSGSLKTAMPSELLTSQHYNNSLSTNITDLNGGAASKLDIGSVGTSILQEKLGQIKAEHDSEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -