Ptre017834.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pheosia tremula
Gene Symbol
nfxl1
Assembly
GCA_905333125.1
Location
HG995421.1:6443882-6446353[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 2e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.014 1.4e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 18 3.1e-07 0.0031 17.6 15.5 3 19 186 202 185 202 0.95
4 18 6.1e-08 0.00059 19.9 11.3 3 19 239 255 237 255 0.91
5 18 0.76 7.5e+03 -2.8 2.2 6 10 280 284 279 284 0.83
6 18 1.2e-09 1.2e-05 25.3 10.0 1 18 290 307 290 308 0.97
7 18 6.6e-07 0.0065 16.6 17.7 3 19 345 361 344 361 0.93
8 18 2 2e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 18 5.9e-06 0.058 13.6 18.3 1 18 395 412 395 413 0.97
10 18 4.9e-09 4.8e-05 23.4 17.2 1 19 422 440 422 440 0.99
11 18 0.0002 2 8.6 6.4 9 19 488 498 486 498 0.89
12 18 0.051 5e+02 1.0 8.4 3 12 509 518 508 518 0.87
13 18 0.35 3.4e+03 -1.7 3.6 14 18 547 551 547 552 0.87
14 18 0.38 3.7e+03 -1.8 0.3 7 12 567 572 567 579 0.78
15 18 5.3e-06 0.052 13.7 4.8 1 11 588 598 588 599 0.97
16 18 2 2e+04 -5.6 3.0 6 7 616 617 612 620 0.50
17 18 0.00034 3.3 7.9 14.1 3 18 629 645 628 646 0.87
18 18 1.3e-05 0.13 12.4 13.0 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCTCGTCGGTATCGCGACGCCGCGGCGAAATTACAACAAAATGTCCAGAAACATTTAAAGGGTATGAAGGAACTTTCATCATCAGAAGACGAAGAACCTTACGAGTCCAGTGTCTTGGAGGGAGTCTTCCAGAGCTACTGGCGTGGTGGCGGGGACACCAAGCTGCTGAACAGGACAAAAAATCTACTGGAAGAAGCCATAAGCGGCCGGGCAGTAACCTGCCTCATTTGCATAGGTTCCATCAAAAGAACTGATGCAATCTGGACTTGCGACCACTGTTATTCTTATTTTCACTTATCTTGCATACAAAAATGGTCGAACGACAGCATCAGCCTACGTAGCGAAGAGACTCAAGGCCCTATATCTGTGTATAAGCCACTAAAAATAGAATGGTGTTGTCCGAAATGTCGAAATTCCTATTCCAAACAGGAGATACCGCGTAAATATCGCTGTTTTTGTGGCAAAACTGATGATCCACCATATCATCCCTGGTTAATACCTCATACTTGTGGAGAGGTGTGTGAAAAAAGGCTATCAACTGGTGAAAATTGTAAACATAGATGCTTGCTGTTATGTCATCCTGGTCCATGCCCACCATGTCCTCAGACTGTGAATGGAGTATGTTATTGTGAGAAGGAGCATAAGAGAGTGAGATGCAGCGCTGCTAAATGGTCATGTGGCCAGCAATGCAAGAGAACTCTCTTATGTAAAACCCACAAATGTGAAAACTTATGTCATGAGGGTGACTGTCCTATGTGTAGCTACACAAGTGTCCAGCCATGTCAATGTGGTTCTGAGAAAGCCAAGAGACCTTGCAATGACCCATTCTGGCAATGTCAGAAACCATGCAACAAAAAGTTTTCATGTGGCTTTCATAAATGTGAAAAGATCTGCCATTCAGGCAGTTGTGGTTCCTGTTTAAACTCAGGAACTAAATACTGCCCTTGTGGAGCTAACCAACGCTTTGTACAATGCCCAGATGTCATGGAAACTTGTTTGGGCACCTGCAACAAGAAGCATGATGATTGTGAGCACCGTTGCCCTGAAAAATGCCATAAAGGCCCCTGTCAACCTTGTCAAGTCCTGATACAGAAGCAATGCTTTTGTTCCACACATACTAGGTCTCTACCATGCAGCAAGGAGTTCAAATGTGAAACTAAATGCCGCGGAACAAGACCATGTGGGAAACATGGTTGTGCAAGAAAGTGCTGTAATGGCAACTGTCCGCCTTGTGAGAAAATATGTGACAAACCTCTTCAGTGTGGCAGACACAAATGTACTAATGTCTGCCATCATGGCCCATGCTACCCTTGTCCCTTAGAATCAAAAGTGACCTGTAGATGCAAGGAAACTTACATTACAGTACCATGTGGTAGAGAGAGACACACAAAACCACCAAAATGTGGCTTACCATGCAAGATTAAATACAAATGTGGCCACATTGAGGAGAACAAACATTCCTGCCATTTTGGTGATTGCCCTCCATGTAAAGCAATATGTGATAAGAACTATAAGAAGTGCACCCATCAATGTAAAGCTACATGCCATGAATATGTTGCTGTAGTTTTTAAGCAAATTGAGAAGCCAGCTACTCCATGGGAAGTTCAACCTCCAAAGACAAAAATAATGACTTTAGACTGTCCACCATGTGATACTCCTATCCCAATAGTTTGCTTTGGCGAACATGAGACTGATGAACAGGCATGCCATTCTGCATCAAGAAGACCTTGTGGGAGGGCATGTGGCCGGCCATTGAAATGTGGTAATCATAAGTGCTCTTTGCTATGTCACTTACATCAAACAGATCCGGATCATCCAAATGTGCCTTCAGATTGTAAGCAGTGTGAAAGGGAATGTTTAGTGCCCCGTCCAGAGAAATGTACCCATAAATGCAAAATTAGAGCCTGCCACCCTGGCACATGTCCGCCCTGTGAAATACTGGAGCGGTTATCCTGCCATTGTGGCCTAACAGAGGTTTACTTACGATGCCGAGAGATTGCTACTGCAACTGAAGAGATTCTATCTTGCAAGCAGCAATGTCCGAAGAACTTAGACTGTGGACACAGATGCCGTAACAACTGTCATTCTGGTCCTTGTGGCAACCAAGTATGTACAAAGAAAACAAAAATACATTGCCCATGTGGAAACTTGAAGAAAGAAGCCCCCTGCAACACAGTGAGAAGTGGAGAACCTAATGTAATGTGTGATAAGTCTTGTGAAGCCAAAAAGATTGCTGCAAAGTTGGAGAATGAGAAAGAAAAACAGAGATTAAAGGAACTAGAGGAGGAGAAGAATAAGAGAGAATTAGCTGAGTATGAGTGGAAATTGAGTGGGAAAAAGAAAAAATATAAGGAGAAAAAGATGGTGGCCAGTACTGATGATAGGAGCTTCTTGATGAAATTTTGGATGCCTATATTATCAGTTATAGCTGTTATGGTGGCAGCTTTATATTATATATTTTATGTATGA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKGMKELSSSEDEEPYESSVLEGVFQSYWRGGGDTKLLNRTKNLLEEAISGRAVTCLICIGSIKRTDAIWTCDHCYSYFHLSCIQKWSNDSISLRSEETQGPISVYKPLKIEWCCPKCRNSYSKQEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCEKRLSTGENCKHRCLLLCHPGPCPPCPQTVNGVCYCEKEHKRVRCSAAKWSCGQQCKRTLLCKTHKCENLCHEGDCPMCSYTSVQPCQCGSEKAKRPCNDPFWQCQKPCNKKFSCGFHKCEKICHSGSCGSCLNSGTKYCPCGANQRFVQCPDVMETCLGTCNKKHDDCEHRCPEKCHKGPCQPCQVLIQKQCFCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTNVCHHGPCYPCPLESKVTCRCKETYITVPCGRERHTKPPKCGLPCKIKYKCGHIEENKHSCHFGDCPPCKAICDKNYKKCTHQCKATCHEYVAVVFKQIEKPATPWEVQPPKTKIMTLDCPPCDTPIPIVCFGEHETDEQACHSASRRPCGRACGRPLKCGNHKCSLLCHLHQTDPDHPNVPSDCKQCERECLVPRPEKCTHKCKIRACHPGTCPPCEILERLSCHCGLTEVYLRCREIATATEEILSCKQQCPKNLDCGHRCRNNCHSGPCGNQVCTKKTKIHCPCGNLKKEAPCNTVRSGEPNVMCDKSCEAKKIAAKLENEKEKQRLKELEEEKNKRELAEYEWKLSGKKKKYKEKKMVASTDDRSFLMKFWMPILSVIAVMVAALYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01180007;
80% Identity
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