Basic Information

Insect: Pheosia tremula
Gene Symbol: -
Assembly: GCA_905333125.1
Location: HG995427.1:3757894-3787831[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.37 22 5.9 0.3 1 17 608 624 608 625 0.90

2 14 0.00024 0.014 15.9 2.2 2 23 635 656 634 656 0.97

3 14 0.016 0.96 10.2 1.3 5 23 672 690 671 690 0.96

4 14 0.016 0.96 10.2 1.3 5 23 706 724 705 724 0.96

5 14 0.016 0.96 10.2 1.3 5 23 740 758 739 758 0.96

6 14 0.016 0.96 10.2 1.3 5 23 774 792 773 792 0.96

7 14 0.016 0.96 10.2 1.3 5 23 808 826 807 826 0.96

8 14 0.016 0.96 10.2 1.3 5 23 842 860 841 860 0.96

9 14 0.016 0.96 10.2 1.3 5 23 876 894 875 894 0.96

10 14 0.016 0.96 10.2 1.3 5 23 910 928 909 928 0.96

11 14 0.016 0.96 10.2 1.3 5 23 944 962 943 962 0.96

12 14 0.001 0.062 13.9 0.1 2 20 970 988 970 989 0.94

13 14 0.00047 0.028 15.0 7.0 1 23 1018 1040 1018 1040 0.96

14 14 7.3e-05 0.0044 17.5 0.2 1 23 1045 1067 1045 1067 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.37	22	5.9	0.3	1	17	608	624	608	625	0.90
2	14	0.00024	0.014	15.9	2.2	2	23	635	656	634	656	0.97
3	14	0.016	0.96	10.2	1.3	5	23	672	690	671	690	0.96
4	14	0.016	0.96	10.2	1.3	5	23	706	724	705	724	0.96
5	14	0.016	0.96	10.2	1.3	5	23	740	758	739	758	0.96
6	14	0.016	0.96	10.2	1.3	5	23	774	792	773	792	0.96
7	14	0.016	0.96	10.2	1.3	5	23	808	826	807	826	0.96
8	14	0.016	0.96	10.2	1.3	5	23	842	860	841	860	0.96
9	14	0.016	0.96	10.2	1.3	5	23	876	894	875	894	0.96
10	14	0.016	0.96	10.2	1.3	5	23	910	928	909	928	0.96
11	14	0.016	0.96	10.2	1.3	5	23	944	962	943	962	0.96
12	14	0.001	0.062	13.9	0.1	2	20	970	988	970	989	0.94
13	14	0.00047	0.028	15.0	7.0	1	23	1018	1040	1018	1040	0.96
14	14	7.3e-05	0.0044	17.5	0.2	1	23	1045	1067	1045	1067	0.98

Sequence Information

Coding Sequence: ATGGCGCTGTGCGAGAGTCAGCTCGACTGTGCGATGCCTCAGCTTAAGCGCGACCCGTCGTCGGGCGAGCAGCGCAGCCAGCAGCGTGCCGACGACCAACCGACACAGCTGCATCACAACGGCGATATATATGCTTTGAATCAAGTGCCTGGTGGTCTACCGCTCAGTGTGGACTACCGTTCACCAGTGTCGCATTTCGTTCCACCTGCAGTCGAGCTGTATGCGGCCAGACAGAAGCAGGAACAGTCCAGCGCTGCAGAATCCAGTCAGCCCGCGACACCTGTCAAGCGAAAGCGCGGCAGACCGAGGATAGATAAAACGAGTCCCGAATACTTGGCCAACTTGGCGGCCCGAAAACAGGCCAGGGAAATGGCTCACAACTCCTCGCCACCCGAGCGTCTAAGAGTAAGTCCTCAAGCGTCGCCGGGCAAGCGAAATCGCGGCCGGCCAAGGATAGATAAATCGGACCCCGAATATATGGCCAACTTGGCGGCCAGAAAACAGGCCAGGGATATAGCGGCAATGATGAATAACTCGCGAACACCGGAGAGCGGAGAAAAACGCAAGCGTGGGAGGCCACGCGTGGACAAAACCAGCCCAGAGTATCTGGCCAGGAAGCGGGCCAGGGAACTGGAGGCACTCGAGCGCAAGGCGAAGCGAGAATACAAGCGGCGTGCCACAGGGGCCAAACCGATCTCGAAACCTCAACTGCCCACTCGCGTCATGAAAAAGTTGCCAGCATTAAAAAATAAAATGGTCACAAGGAAATTGCCGCAGAAGGGCGGCAACACTGTGAGGAAAGTGGGTGATAGGAAGTGGGCTGGCTGGTGGTTAAAAGGCCCTCGTTCCACAGACTCGGCGGCATCATCTTCAGCCGGCGAGAGCACTCCGCGCGTTAAGAGGAAATACACAAAGAGAACGCCGAACACCAAGAAGGATGCTACCCCATCGACTGAACGTGTTAAAGGGAAACGGGGTAGACCCAGGAAAGTGGACCAGATGGCGGCAAACCACAAGCAAACCCAGCAGCCCAAGATCCGCGTGAGAAATAATCTCATGCCAGTCAATACGGAACCAATAAGCTTGGACAGCGACGACGAGCCAGATCTTGGGTCGCCGAGCCAAGCGTCGGACTCGTTGAGCTTGGACGAGAACTTGCGCGCGATACGACACATACACGAGAAATACGCTAACATTGATAAGGATGACCGGTACGAAGCCCATCTCTTGGCTGCGAACTTCAAGAAGCCGTCGATGGACGCCCAGAGGCGAGATGATGATGAGGTGCTTTCCGTCAGGAGTTCAGAAGGTGGCGCTTCAGTCAAAGATTCCGAAACGAAGGTCGAGAAATTGGAAGACAGTTCGAACTCGGACTCGGACAGCAGCAGTTCGGGATCGGTTTGCGGCAAACGGACTCACTACGCCCGGCGAACGAGTATATCGCCGCCGCCGACTGGAACCGGTTTTGCTGTGAGACGGCGCTCACTGAATCAATCGGCGCGCGCAACACAGCAAACTGCGGAGAGTAGTTCAAGCTCCGGGTCGAGTACGTCCTCAAGCTCCGGCAGCTCGGACTCGTCGGACTCGTCCGACTCCGAGTCGGACTCGGAGTCCGAGAAACCGAAGACTGAATCGCAGGCGCCTGCGCACGCGAACAACACTACTGGTGATGATGACAGATCGTTCGGCGCTTGGTCCTACAGCGGACCAGCGTCCGGCTCGGACTCCGAGTCCGACCCGGAGCGGTCCGCGGAGGTCGTGGTCCCGCCGGGCTCGCACGACGAGATCAGCGAGTCCGAGAACGAGTCCGCGGACAAGAGCTTCCAGTGTCACATATGCAGCAAGTGGTACTCCACCCGAGTCACGCTCAAGGCGGAGGCGCACCGCGGCGCCATGACGGTGCGATGCGACGTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTGAGCCAGCTACATATATATATACACTGTGCCGCAAGTGCTTCGAGGACGAGGCCGAGCTGCTGGCGCACCACCGCCGCCACACCGACGACGAGCGAGCCGGTCGGTGCAGCGCGTGCGGCGCCACGTTCCCGCGCTGGGAGCAGCTGCGGCGGCACCGCGCGTGCGCGCACGGGGCGGGCGCTGGGGCGGGCGCGGGGGCGGGCGCGGGGGCGGGCGCTGGGGCGGGCGGCGGGGCGGGCGCGCCGCACTCGTGCGCGGTGTGCGGCAAGCGCTTCGGCCACGCGCACTCGCTCACCCGACACATGCACAACCACGCCAAGCAGCTGTACAGATGCGTCGTGTGCAAGGCTTCGTTCGACCGCGCAGACCAGCTGGCCACCCATCTCAACAGCCACCTGGCTAACTACAAGCGTCTCAAGCCTTAG
Protein Sequence: MALCESQLDCAMPQLKRDPSSGEQRSQQRADDQPTQLHHNGDIYALNQVPGGLPLSVDYRSPVSHFVPPAVELYAARQKQEQSSAAESSQPATPVKRKRGRPRIDKTSPEYLANLAARKQAREMAHNSSPPERLRVSPQASPGKRNRGRPRIDKSDPEYMANLAARKQARDIAAMMNNSRTPESGEKRKRGRPRVDKTSPEYLARKRARELEALERKAKREYKRRATGAKPISKPQLPTRVMKKLPALKNKMVTRKLPQKGGNTVRKVGDRKWAGWWLKGPRSTDSAASSSAGESTPRVKRKYTKRTPNTKKDATPSTERVKGKRGRPRKVDQMAANHKQTQQPKIRVRNNLMPVNTEPISLDSDDEPDLGSPSQASDSLSLDENLRAIRHIHEKYANIDKDDRYEAHLLAANFKKPSMDAQRRDDDEVLSVRSSEGGASVKDSETKVEKLEDSSNSDSDSSSSGSVCGKRTHYARRTSISPPPTGTGFAVRRRSLNQSARATQQTAESSSSSGSSTSSSSGSSDSSDSSDSESDSESEKPKTESQAPAHANNTTGDDDRSFGAWSYSGPASGSDSESDPERSAEVVVPPGSHDEISESENESADKSFQCHICSKWYSTRVTLKAEAHRGAMTVRCDVCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGEPATYIYTLCRKCFEDEAELLAHHRRHTDDERAGRCSACGATFPRWEQLRRHRACAHGAGAGAGAGAGAGAGAGAGGGAGAPHSCAVCGKRFGHAHSLTRHMHNHAKQLYRCVVCKASFDRADQLATHLNSHLANYKRLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -