Ptre019095.1
Basic Information
- Insect
- Pheosia tremula
- Gene Symbol
- ZNF296
- Assembly
- GCA_905333125.1
- Location
- HG995425.1:862274-873870[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.038 2.3 9.0 0.1 3 23 113 133 111 133 0.96 2 14 0.002 0.12 13.0 3.2 1 23 263 285 263 285 0.99 3 14 0.00099 0.059 14.0 0.4 1 23 291 314 291 314 0.94 4 14 5.1e-05 0.003 18.0 0.2 2 23 498 519 497 519 0.97 5 14 8.1e-05 0.0048 17.4 4.1 1 23 525 547 525 547 0.99 6 14 0.23 13 6.6 4.1 1 23 606 628 606 628 0.96 7 14 1.7 1e+02 3.8 0.1 2 23 636 657 635 657 0.95 8 14 0.037 2.2 9.0 6.6 1 23 663 685 663 685 0.95 9 14 0.00047 0.028 15.0 4.0 1 23 691 713 691 713 0.98 10 14 0.00054 0.032 14.8 2.1 1 23 722 744 722 744 0.98 11 14 0.002 0.12 13.0 1.9 3 23 792 812 791 812 0.97 12 14 0.0022 0.13 12.9 4.0 1 23 829 851 829 851 0.97 13 14 1.5e-06 8.7e-05 22.9 1.0 1 23 857 879 857 879 0.98 14 14 1.8e-05 0.0011 19.4 5.3 1 23 885 908 885 908 0.98
Sequence Information
- Coding Sequence
- ATGAGTCACAGACCAATGGATTTAGATCCGTTAAGCACGTATGACTACCCATCGTACAATAGTTATCCTGCATATCCTCACAACGTCAAATCCGAACAGCCAATATCTTACCAATACAACAACACCTATATACACAATCAACAAACCACAAATCAACAACCAATCATTAATGATCAAAGTAATGAAACAGCACCGAACGTAAATGACAGCGGTTCCACAAATAACGATGGCAAAGATGATGGCAGAGTCGTTGCAGGCAAAAGAAGTGACAAAAAGAACGGCAGAAGTTACTACTGTTCGGAGAAGATAACGGACACAAACTTTGCATTCTACGGATGTTCCGTGTGTGATATTAGTTATACAACACTGTTGGACCTGGATCAGCACGTCATCAGCCACAAGGACCGCATGACGAGCTACAGGTTGCGTTTAAAAAATCAAGTCAAGAAGAAACAATTAAAGAAACAGCAGAAGAAATTTAAAAAGTTGTCCAAAATTAAAAAGGAAACCGACCCCGTGCTAGAAATTAAACCGGAAGATGGTTATATTGGTAATGAAACGGCTGGTGATTATATGAATAAGGACTCTGATATCAACGGAATAAGTCCAAATTTGAATGTTAACGGATGCGTTGAGAATACTTCGCAGATCAATGGGACAGTGAATAATTCTCAAAATAATGGTGTTTTAAATAAGGAGAATTCGAATATAAACAATTCAAGCGAAAATAGTTTTAAAGATAATGCAGTTAAAGATGCAAATGAGTTGAAAAATTTAGAGAAAATATACAAATGTTTTGCTTGTAAAAAGCAGTTTACGTTAAGTTATTATTTAAAACTACACGTGAGATCACATACAGATGAGAAACCGTACATTTGTAATATATGTGGCCAGTCGTTTATCACAGCGAGCAAACGAGGGAGGCACAACAAGAGAATACACTTAGCTGAGCGGTACCAATTCGACTCGTTGACAGGACACTTTGATAAGAATCATCCCGACGACAAACTGGAGGGCGAGCCGTATGACTACAACGCTATCCTACCGTATCTCAAAGAGCTAGAGGAGCAGCTGAAGGTACAGGATCAGGACGTGAAGCCGGACCCCGAAGGTTTGTTGTGGGACGGCGACCAACCGTTCGTGGATGCTGCGTCCGTTCAGCAAACGACTGAATCTGTGCAGCCTCAATCAGATGACCAGAATGAACCATCAGTAATGGGTATTATAATCGAGGAGATCAAAGTTGACCCTGACGATAGCAATGATGGTGATGTCAAGGTGAAGACGGAGATGTCTGATGATGAGGGGCACGCCGGTGATGACTATCCTGGTGATGACCACATCCGTGACGATGATACGAAAAACGAGCCGGTTAAGGATGAAAGCAACTCCGACGAAGACTACTTCCCCTCCAAGACTTGGCTCTCGTCCCCTAAAATGGACCTGTCCCCCCCCTCCCCGCCGCGCCGCCGCCGCAAGTCCTCCTCGCTGGTGTGCGAGGTGTGCAACAAGCGTGTGAGCAGCGCGTCCTATATGCGAGTGCATCTTCGCACTCACTCTGGCGAAAAACCATTTAAGTGTTGGCACTGTGGCCGAGGCTTTATAACTAGCAGCAAGATGCATCGGCACGTGCTTACCCATGAGATTGATGAAGAGGGCAAATCGGAGTCCGTTGGTGACAAGACAGCCTCAGGAGACGGCGAAGTCACCACCGGCAAGAATAAAAATGCATCTAAGAAGAAAACAAAATCTAAGTACTCGAAAGCAAATAAGAACAATGAGGAGAAGCCGAAAAAGAAGTATCAGAAGAGACCTCACGCCTGCGAGTTCTGTAATCAGAAGTTTTTACACTTGGACATGCTTCAAGTGCATAGAAAGAGTCACGAGGGGGAGAAATTGGTGCTTAAGTGTAACTTCTGCCTCGTCGAGGCGTCCGACGAGGCGTCGCTCAAGGAGCACGAGGCCACGCACACGGGACCGAAGCCCTATCTGTGCACTATATGCGGGAAGTGTTATAAGAAGAAAGAAACTATGGTGTACCACAAGAAGCACCACAAGCCGGACCGCGAGTTCGTGTGCGAGATATGCTCGAAGCGCTTCGGCGCGGCGTGCAAGCTGCACAAGCACATGCGCACGCACCGCGCGGGCGGGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCACCTCGCCACGCACCAGAAGGAGGGGCTGATCCTGGAGGAGAACCGCAGCGACATCCTGGCGATGGTGCTCCAGAACGCGCGCAAGATACCCAAGCAACCCGACGCGCCAGCCAACCTCACAGACATCATCCCCTCCGACGAGAGATCTCGCATATGCAACATATGCGGAGAAATCTTCCACCATTTCTACTATCTCGAGGAACATCTCAAGAACCACGGCTCCCGAATATCTATTGAGGATACTCAAAAGGACGAAGAAAAGAAATATATATGTCAGATATGCAACAAGGGATTCAAACTACATTACTATCTGAAACTTCACACTTTCACTCACTCGAAGGAGAAACCGTTTATGTGTCAACAGTGTGGCAAAGGATTTATTACTAAGGGCAAGTTGAAAAGACACCTGGAGACACACACCGGGCTCAAGAAGTACCAGTGTCATATATGCTGTAAGTTTTTCACGAGGCCCAGTTATCTTAGGATTCATATTAGAACGATCCACGGTACACAGGATTATAATTTTAGCTTTGATAAGTACAGTGTTAACAATCTGGCTATGCCCGTGTTGACTCAGATATCTGATGGCAGTCCGGGGAGTATTTGA
- Protein Sequence
- MSHRPMDLDPLSTYDYPSYNSYPAYPHNVKSEQPISYQYNNTYIHNQQTTNQQPIINDQSNETAPNVNDSGSTNNDGKDDGRVVAGKRSDKKNGRSYYCSEKITDTNFAFYGCSVCDISYTTLLDLDQHVISHKDRMTSYRLRLKNQVKKKQLKKQQKKFKKLSKIKKETDPVLEIKPEDGYIGNETAGDYMNKDSDINGISPNLNVNGCVENTSQINGTVNNSQNNGVLNKENSNINNSSENSFKDNAVKDANELKNLEKIYKCFACKKQFTLSYYLKLHVRSHTDEKPYICNICGQSFITASKRGRHNKRIHLAERYQFDSLTGHFDKNHPDDKLEGEPYDYNAILPYLKELEEQLKVQDQDVKPDPEGLLWDGDQPFVDAASVQQTTESVQPQSDDQNEPSVMGIIIEEIKVDPDDSNDGDVKVKTEMSDDEGHAGDDYPGDDHIRDDDTKNEPVKDESNSDEDYFPSKTWLSSPKMDLSPPSPPRRRRKSSSLVCEVCNKRVSSASYMRVHLRTHSGEKPFKCWHCGRGFITSSKMHRHVLTHEIDEEGKSESVGDKTASGDGEVTTGKNKNASKKKTKSKYSKANKNNEEKPKKKYQKRPHACEFCNQKFLHLDMLQVHRKSHEGEKLVLKCNFCLVEASDEASLKEHEATHTGPKPYLCTICGKCYKKKETMVYHKKHHKPDREFVCEICSKRFGAACKLHKHMRTHRAGGFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLILEENRSDILAMVLQNARKIPKQPDAPANLTDIIPSDERSRICNICGEIFHHFYYLEEHLKNHGSRISIEDTQKDEEKKYICQICNKGFKLHYYLKLHTFTHSKEKPFMCQQCGKGFITKGKLKRHLETHTGLKKYQCHICCKFFTRPSYLRIHIRTIHGTQDYNFSFDKYSVNNLAMPVLTQISDGSPGSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01179698;
- 90% Identity
- iTF_01179698;
- 80% Identity
- -