Ptre006967.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pheosia tremula
Gene Symbol
-
Assembly
GCA_905333125.1
Location
HG995399.1:1875357-1882089[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.0033 0.19 12.3 4.3 1 23 199 221 199 221 0.98
2 30 0.00079 0.047 14.3 0.7 3 20 255 272 255 274 0.96
3 30 0.00027 0.016 15.7 0.2 2 23 305 327 304 327 0.96
4 30 0.024 1.4 9.6 0.0 2 21 346 365 345 366 0.94
5 30 0.00049 0.029 14.9 0.7 1 21 376 396 376 398 0.95
6 30 0.00021 0.012 16.1 0.3 1 23 417 439 417 439 0.97
7 30 0.024 1.4 9.6 1.7 1 21 479 499 479 500 0.92
8 30 0.0025 0.15 12.7 4.3 2 23 541 563 541 563 0.97
9 30 0.25 15 6.4 0.9 1 23 613 636 613 636 0.94
10 30 0.006 0.36 11.5 0.2 1 23 690 712 690 712 0.97
11 30 0.0019 0.11 13.1 5.0 2 23 724 745 723 745 0.97
12 30 0.0086 0.51 11.0 1.0 2 23 757 778 756 778 0.96
13 30 0.0038 0.22 12.1 0.5 1 23 788 810 788 810 0.98
14 30 0.02 1.2 9.9 10.0 1 23 839 861 839 861 0.96
15 30 0.0015 0.089 13.4 3.4 1 23 872 894 872 894 0.98
16 30 1.1e-05 0.00068 20.1 2.2 1 23 902 924 902 924 0.98
17 30 0.00021 0.013 16.1 0.2 2 23 944 966 943 966 0.97
18 30 0.66 39 5.1 0.1 1 23 984 1006 984 1006 0.91
19 30 0.091 5.4 7.8 4.1 1 23 1013 1035 1013 1035 0.98
20 30 0.014 0.85 10.3 3.5 2 23 1046 1068 1045 1068 0.95
21 30 0.00075 0.045 14.3 0.3 2 23 1091 1112 1090 1112 0.95
22 30 3.3 2e+02 2.9 3.4 2 23 1155 1177 1154 1177 0.94
23 30 0.0088 0.52 11.0 0.3 2 23 1193 1214 1192 1214 0.95
24 30 0.68 40 5.1 3.5 5 23 1224 1242 1221 1242 0.94
25 30 0.0021 0.12 13.0 0.8 2 23 1253 1275 1252 1275 0.95
26 30 0.22 13 6.6 2.9 2 23 1292 1310 1292 1310 0.93
27 30 0.085 5.1 7.9 1.5 2 21 1314 1333 1313 1334 0.94
28 30 2.1 1.2e+02 3.5 0.8 2 23 1383 1404 1382 1404 0.93
29 30 0.0025 0.15 12.7 0.8 2 23 1415 1437 1414 1437 0.96
30 30 5.5 3.3e+02 2.2 1.8 2 19 1475 1492 1474 1495 0.87

Sequence Information

Coding Sequence
ATGGCCCTCAAATTGGGAAAATGCAGGCTATGCCTCAAGCTCGGCGACTTCTACTCCATCTTTACGGTCGACAATGCGCTGCAGCTCGCTGAGATGGCCATGGAATGTGCCCGGGTGAAAATATATGAAGGGGATGGGTTACCTGACAAAGTGTGCACAGAATGTGTGCAAAAACTCAGCAGTGCATATATTTTTAAGCAGCAATGCGAGAGGTCCGATCAGGAGCTACGGCGAAACTATGTGCCACCACCAGGTTTCAGCATCAGTCCTCCCCCACCAAACAGACAGAGCAGCGACTCTGCCTTCTCCAATCACACCGACAGCTCAAACTTGACTAAGCCATCTTCCTCCTTTGACAAAAATATAACTCCCAAAACCAGAAATAGAAAGCGTAGTATAGAGAGCGACAATGCATCGCTTGGCAGCCACTCCAATGACTACCGGCCAAGCTCCTCAAAACGCGTCGAAGAACTCCGTCAATCACAGAAAAGGCCCAGACTCAAGGAGTACAACACTCAAATGGACTCCGACTATGAAGACAACAGTATGTGCACAGCTGAAACGGACTCTGATGAACCATTACTAAAAAACGTTTTCAAGTGTAATCAATGTCCCAAACAGTTTCATTCAGTCAAAAGTCTTAACTCACATAAGAAGGTACACAAAAGGGATAGTCTTGGGGAAAACGCCGTTGTAAATATCCCAAAGAAAACTATGAACTCAAGTATGGAGGATGCCACAGATGTGGAGGACCGATTGGGCTGTGACAAATGTGGGAAGACATTCAAACTTAAGATCATGCTGAAGAGGCATCAAGATCAAGATGCATGCTCTAAGCCTACAGTGGTGTCCCCTCAAAAAGAGCTACTCGTCTCATTGGAGCCCATTGATGGTATGCAGAACAGAAAGATGGTATGTGATATCTGTTCTTCGAAATTCAAATCTGTTGATAACTTGGAGAAGCATTTGAGGGTGGTCCACGCCGCTGTGCTCAAGAGAGACAACGATAAACCCGAAAACGGATTGGTGATGGTTCCATGCTTGTATTGCCGTGAGTCGTTCAACGATTACTATCTGTACACCGCGCACATAAACGGGTGCCCGAAGATAGATACATCGATGCCTTACCAGTGTCCGGTGTGTAGCAAAGTTGTGTCTAGGAAGAATAATTTCTTCCTGCATCTGAAGCCGCACTTCGATTGGCGGAATTGCTCTGACGCGGCGCCGCAGTTTAACGCGACGCAGTCGTTCGAGTGTCGCATGTGCGGCAAGAAGCTGCCGACCCAGGATGAGCTCATCACACATCTGACGTCGCACGTCGCACAAGTTCAAGATGACGATAACAGGGCTGACAATGAGTCCAGGGCAAGCACCATAGAGGACTCAACATCTATCCACTCGGTACCAAGCAGCTCTAACACATCACTTAAGATATACAAGTGTGGCAAATGCGAGAAAGAATTTAAATATAAGAAGTCACAAGAAACACACGAAATGAAGTGTCAAACCGCAATTGTGGAAGTGAAGGCGGAACCGCCGGATAAGGCGTCCGAAAGCCTCCTCAGCTACACCTACCGCGATTCTGAATCGGAGTCTAGTCAAGAGGAAGGCGACGACAACACTTGCGACATTTGCGAAAAACAGTTCTCGTATAAACGATTACTGCTCCATCACAAGAAGACAAAACACAATATGAGCTCCGGCCACAAGCGCGCGAAGATCTTCCTCAAAGATTGCAATGTCCGCTGTTTGATATGCGACATTGAGATGAAAGTGAGCGCGGTCAACGAACACAATCAAACTCATATATCCAAGAACATGAAACCTCGAAACCTGTACACTTGCATCGACTGCAGCGATCAGTTTAAGAGCTGCAGTGCGTTGGCGAATCACATCAAACTAATTCATAGGTTGAAGCAGCAGAAGTTGGAGAATGTTCTCGATCCGTCGGCTTTTTGTGAGGTCGTTGTGGCTAAAGCGGAACCGCTGGACCCCGTCCAGAGTCACGACGACTTCGGAGAGGTTCCCGTCACCCAGGACAGCAAGCTGCTCGTCGATCTCAATGGGTTCTCGTGCCCAATATGCAGCAAGAAGATGCCCACGCTGATATCGCTGAAGAGGCACGTCAATTGGCACTCGAATGTTGGTAACAACATAGAGAAGAAGTTGGTGTGTTTCGTCTGCAATGAGTCATTCCGATTCCAATGCCACTACAAGCTGCACATGCGCGTGCACTACCACGACACGAACCTGGACCCGAAACATCTCACCTGCCCAATCTGCAACCGCCGCAGCAAGCACCTGCGGGCCGCGCAGGCGCACATGAACTACCACAAGCAAACACGCTTCCAGAACAAAGACTACCAGTGCTCCATATGCGAAAGGGTCTTCCAATACAGAAAAGTATATCTTTCACACATGGCGATACATTACAAGAAGGGTGACAGCGCCAACAACACCATAGTCGGCGATGCGTTACCGAACTCGGCGGACACCGCGGTGTTCGACGGCACGCACACCTGCCATCACTGCGGCAAAGTGTGCGACTCCGAGAACTCGCTCAAACACCATCTCATCTACCACAATTCCAAGACGTTCCTATTCGGCGCGAGACACGAGTGCCAGATATGCAAGGTGAAGTTCACCAATAAGAGGAGACTGGAGATCCACACCCGATCCCACTACGAAGACGACAATGGCCAGTTCAAGTGCACCACATGCGGCAAAGGGTTCACGGACGAGAAGTACTTCCAGAGGCATTTGAAAGGGCACAATTTTGATCATCACTCTCATAAAAAGAGAATAGAAAAGTTAAGAAAAAATAAAGTGAAGTGTCCCATATGCAATAGATACTACGCGGATTTAGTGAAACTGATTCGGCACTTGAGGCGGACGCACCCTGAGAGCAAGATGATCAAGCCCGACCCCGATGCTCCGCCCCAACACTATTACTCGTGCAAACTGTGCGCCAAAGTGTTCCTAGACGAACGGAGACTGCAAGCTCATGAGGAAGCACATCTAAGGAAGCCGGAGTTCTTCAAATGTAAGTTCTGTGGAAAGAACACTATTTCGCTTAAGAATCACAGGATACACATAAAAAGTCACTTGACGCAAAAGCACGTGGATGACCCGCTGAAATGTGAGCACTGCGAGGAGACGTTCATCAAAGGCTACGACTTGCACCACCACCTGCGCGACGCGCACGCCATCAACGAGACATGGATCGCGGAACGCACCCCACAAACCCTGGACGGGCCTCTGAAAGAGCTACAATGTTCTATCTGCTTCAAAGTGCTCGCGAGCAAAGGAAACTTCGAGAGGCACATTGACTATCACAACTCCTTGAGGTGCAACTACTGTTTCGATTACTTCAGCTCCCTCCGGTTCCTGGAAGGTCACTTGGCGTTCAGTTGCGAGAAAAAGAAATTGATAGGGGAGACTGAAGTTTACCCCAAAAATGTGAAATGTGACATTTGTTATAAAGCATTCCATTTGCAAGTGAAACTGGACTGCCACCTACGAACCCAGCACAATATCATAGTAAACAGGGAGGCTTCGGCGAGCAAGTCGGAAATTGTGTGCGACTACTGCTTCAGGATGTTCGAGAATGAATATGCTCTGTCCACTCACAAAATTTATCATCGCACTATCGGCTATTACGGGTGTATTTATTGCAACAAAAAGTTTAATACAATCACACTTTATAACAAGCATAAGAATCACCACTTTTCTCAACTTAACGTCGACAATCCGACCAAGTGCGAACATTGCGACGAAACGTTCGTCGCGTTCAGGGAATTGATATACCACATGCGGGACGAGCACGGCGACAATAAAGAGTGGATAGTAATGCCTAAGGAATCCATAGAGGAAGAGTGTCCCATTTGCAAGAAAGTTTTCTTCAATTTGCACAAACATCTGCAATATCACGAAGAAAATAAATGCAAGAAATGTGGGGAATACTTTTACTCGAGAGTAGACTTCGACAATCACTTGTGCGCTATCGAGAGTGATGAAGAAATTATGGAAAACCTCACTAACGGCGGAGCGTTCAAATATCAAGAGTGCACATTCTGTTTCAAGCCAATCACTAAGAAGAATTCTAAATTGATGCATGATAAAATACACAGAGGTTCAGGGTCAATATCGTGCAGGTTCTGTGCGTTCAAGTTTAAAACGATGGATGCGTTCAACATACACGCGTTCTCCCATCGAAGTAGGAAATACAATAAAAAACCTATTAAGTGTAGAAAATGTGGCGAGAAATTCGTCAAATACGGACCTTTCATGCGACACATGAAACAAGTGCATAAATCGACAAAGAAAGTCCACTACAGGGCGATCGTGAAGGCGGAGTCATGTGTGGTGTGCGGCGGCGACTTCCCGAACTTGCACAACCACTACCGAGCTCATTTACTGAACCAGTGTCAACTGTGCCGCAAGTATTTCACTTCGGCGAAAGTGTTTTCGTACCACGAGTGCGGTAAAGAAGACTCTGACCCCTCCAAGGTGTTCACTTGCGACCAGAACCTGAACGAGTTGATCAACTCGTATGTACCAAAAGATGAGAAGGACGATGAAAAGTATTATGGGCACAGTGATGATGATGAAACGGATTTACAGCCGGTCGCCGAGGACGAGGAGAGCCAAGACTCAAAGCCAGATAATGATGTGCTCATGTTTGTCAAATCACCCATTATATCTGATGTTCTGTCGCTGTATCAGAAGGGAGAAGAGAAGGGCGTTGAAGAAGATAACATTGTCAATATAACCGACGACGATTCGGTCGATGTTGAGGAAACAATGTCTGCAGTCGTAGTCATTGATGATTAA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMAMECARVKIYEGDGLPDKVCTECVQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPSSSFDKNITPKTRNRKRSIESDNASLGSHSNDYRPSSSKRVEELRQSQKRPRLKEYNTQMDSDYEDNSMCTAETDSDEPLLKNVFKCNQCPKQFHSVKSLNSHKKVHKRDSLGENAVVNIPKKTMNSSMEDATDVEDRLGCDKCGKTFKLKIMLKRHQDQDACSKPTVVSPQKELLVSLEPIDGMQNRKMVCDICSSKFKSVDNLEKHLRVVHAAVLKRDNDKPENGLVMVPCLYCRESFNDYYLYTAHINGCPKIDTSMPYQCPVCSKVVSRKNNFFLHLKPHFDWRNCSDAAPQFNATQSFECRMCGKKLPTQDELITHLTSHVAQVQDDDNRADNESRASTIEDSTSIHSVPSSSNTSLKIYKCGKCEKEFKYKKSQETHEMKCQTAIVEVKAEPPDKASESLLSYTYRDSESESSQEEGDDNTCDICEKQFSYKRLLLHHKKTKHNMSSGHKRAKIFLKDCNVRCLICDIEMKVSAVNEHNQTHISKNMKPRNLYTCIDCSDQFKSCSALANHIKLIHRLKQQKLENVLDPSAFCEVVVAKAEPLDPVQSHDDFGEVPVTQDSKLLVDLNGFSCPICSKKMPTLISLKRHVNWHSNVGNNIEKKLVCFVCNESFRFQCHYKLHMRVHYHDTNLDPKHLTCPICNRRSKHLRAAQAHMNYHKQTRFQNKDYQCSICERVFQYRKVYLSHMAIHYKKGDSANNTIVGDALPNSADTAVFDGTHTCHHCGKVCDSENSLKHHLIYHNSKTFLFGARHECQICKVKFTNKRRLEIHTRSHYEDDNGQFKCTTCGKGFTDEKYFQRHLKGHNFDHHSHKKRIEKLRKNKVKCPICNRYYADLVKLIRHLRRTHPESKMIKPDPDAPPQHYYSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKNTISLKNHRIHIKSHLTQKHVDDPLKCEHCEETFIKGYDLHHHLRDAHAINETWIAERTPQTLDGPLKELQCSICFKVLASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLIGETEVYPKNVKCDICYKAFHLQVKLDCHLRTQHNIIVNREASASKSEIVCDYCFRMFENEYALSTHKIYHRTIGYYGCIYCNKKFNTITLYNKHKNHHFSQLNVDNPTKCEHCDETFVAFRELIYHMRDEHGDNKEWIVMPKESIEEECPICKKVFFNLHKHLQYHEENKCKKCGEYFYSRVDFDNHLCAIESDEEIMENLTNGGAFKYQECTFCFKPITKKNSKLMHDKIHRGSGSISCRFCAFKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVKYGPFMRHMKQVHKSTKKVHYRAIVKAESCVVCGGDFPNLHNHYRAHLLNQCQLCRKYFTSAKVFSYHECGKEDSDPSKVFTCDQNLNELINSYVPKDEKDDEKYYGHSDDDETDLQPVAEDEESQDSKPDNDVLMFVKSPIISDVLSLYQKGEEKGVEEDNIVNITDDDSVDVEETMSAVVVIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00622185;
90% Identity
iTF_01179676;
80% Identity
-