Ptre019409.1
Basic Information
- Insect
- Pheosia tremula
- Gene Symbol
- -
- Assembly
- GCA_905333125.1
- Location
- HG995425.1:3351221-3355871[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.14 8.2 7.2 0.4 1 23 70 92 70 92 0.88 2 29 1.9 1.1e+02 3.7 0.2 2 23 121 143 120 143 0.92 3 29 1.1 65 4.4 0.9 3 23 167 187 165 187 0.92 4 29 0.0019 0.11 13.1 0.2 1 23 191 213 191 213 0.95 5 29 0.0036 0.21 12.2 0.3 1 23 218 241 218 241 0.95 6 29 0.0034 0.2 12.3 5.7 1 23 247 270 247 270 0.96 7 29 5.6e-05 0.0034 17.9 0.2 1 23 277 300 277 300 0.98 8 29 4.8e-05 0.0028 18.1 1.9 1 23 306 328 306 328 0.97 9 29 1.2e-06 6.9e-05 23.2 4.2 1 23 334 356 334 356 0.99 10 29 5.3e-05 0.0032 18.0 6.7 1 23 362 384 362 385 0.96 11 29 0.18 11 6.9 0.3 1 23 502 525 502 525 0.96 12 29 0.0063 0.38 11.4 0.6 2 23 550 571 549 571 0.96 13 29 0.12 7 7.5 0.1 1 23 595 617 595 617 0.96 14 29 0.00041 0.024 15.2 1.4 1 23 621 643 621 643 0.98 15 29 0.00027 0.016 15.8 0.4 1 23 648 671 648 671 0.96 16 29 0.0018 0.11 13.2 0.4 2 23 678 700 678 700 0.95 17 29 0.13 7.6 7.3 6.2 1 23 707 730 707 730 0.96 18 29 0.00059 0.035 14.7 6.9 2 23 737 758 736 758 0.96 19 29 0.00022 0.013 16.0 1.7 1 23 764 786 764 786 0.98 20 29 0.035 2.1 9.1 0.4 1 23 928 951 928 951 0.91 21 29 0.0064 0.38 11.4 0.8 2 23 977 998 976 998 0.96 22 29 0.3 18 6.2 0.5 3 23 1022 1042 1021 1042 0.96 23 29 1.8e-05 0.0011 19.4 0.5 1 23 1046 1068 1046 1068 0.99 24 29 4.3e-05 0.0026 18.3 0.5 1 23 1073 1096 1073 1096 0.95 25 29 0.14 8.5 7.2 1.2 2 23 1103 1125 1103 1125 0.96 26 29 0.017 0.98 10.1 1.0 1 23 1132 1155 1132 1155 0.95 27 29 0.0017 0.1 13.2 5.2 1 23 1161 1183 1161 1183 0.97 28 29 0.00013 0.008 16.7 0.2 1 23 1189 1211 1189 1211 0.98 29 29 0.002 0.12 13.0 0.2 3 23 1215 1236 1213 1236 0.94
Sequence Information
- Coding Sequence
- ATGTTTATTCTGCGTTATTTCTCATTTTTAGATGACGCACAATCACCTGACGAGGATAATCTCAAAGAGAACGATATCGAACCAGACAATGAGAAATCCATAGCAGAACGCAAGAACTTCACAGACGACCTTAAATCGAGAAAAAAACACGCTGTGATGCTTCTAGAATGCTCCAGAATTTGTCCCTTCCGATGGATGAAGAACTTATACCTCTGTTTCTATTGCGATCAGCAATTCAGTGATCCAGAGATATTAAGGTCACACAATTCCGAACACGACTCGATAAACAGTTCACAGATTAAATACGCGTTGTCTAAACTGAAAAAATATGAGCTAGTCAAAGTAGATATCACAGAATTGAGCTGCAAATTATGCAGTGACGCCACGACAGATTTGGCGTCGCTAAAATTGCATTTACTAGAAAAACATATGAAGAATTTAGATCTAAAGGCTAGCGATGGTCTTTTACCGTTCAGATTGACCAACGAAGAGTTGCATTGCGCGATGTGTGAAGATAAATACGCGGAGTTTAAATCTCTGAATCAGCATATGAATGTACACTTTCAGAATTTCATTTGCGAGCAATGCGGCACGGGGTTTATAACTCCGGAGCGATTGCGGACTCATGCGTTCTCCCACGAAACCGGCGCGTTTGCGTGTGACAGTTGTGACAAAGTATTTCGTTCGAGCAACGCCAAAAACGAACATTATGCCACCGTGCACATGAAAGTTAAACGACACAGATGTCCCCATTGTCCGGAGACGTTCAGAAACTACTTTCAAAGGAATAAACATATATCATCGTTTCACGGATTGAAGTTGAAAGAATTTAAGTGTACCATGTGCCCTAAGGTGTTTACGTTGAGCGGGAAATTGGGTGTCCATGTAAGGACGGTGCATTTAAAAATGAAAAGACACTCCTGTAATGTTTGCGAGTGGAAATTCTACTCGAAGTCCGAACTGAAAGAGCATATGGTTAGGCACGATGGCGAAAGGAAGTATCAATGTAGTATATGTAAGAAATGTTACGCTAGGAAGTATACTTTGAGGGAACACATGAGGATACATGATAATGATCGGCGGTTTGTTTGCACGATATGTGGCAGATCGTTTGTTCAGAATTGTAGTTTGAAGCACCATACTAAGATACATCATCCCAATGTTGTGCTGGTGGTCAGAACAACCACTCCGATCTTAGCTGACGGATCCCAGAGGAGGATCGTGCCGTTATTCCAAGTCGCGTACGACAGAAACTTGTGTAGACCGCTCGGAACGATCACGGACTTCAGTAAACTGATCAGAACGAAGGCGACGTTGTCTCGAAGAGATTTCACGCCGTCCCGCAGTGTCACGCCTCTTGTATCACACTCTCCGACCTCGTACATCGATATACCCTTAGAGTCTCAGGATATATTAGAGAAAAAACAACCAGATATACGACAGAACGCGCTAACGATTTTCGAATTCTCAACAGTGTATCCATTCATTTACGGCAACAACAAATTCAAATGTTTCATCTGCTCACAACCGTACCTAGACATCAATCTGCTCAAGGACCACATGAGGGACTTACATCTGTTCGCGCCATTGAAGAGGCTAGTCAATAATCGAAAGGAAAACGTGTTAAAAGTCGATGTCAGCGATATAAAATGCAAAATCTGCTCAACTCAACTAGTAACCTTTTCACAATTAAAAATACACCTCAAAGGTCACGGGAAACTTATAAATTTAGATATACAAGACAATTTAATACCTTTCAATCTAGAATTGATTGATGGCACATACAGATGCGTTATTTGCGAGCAGAGTTTTATTAAAGTACGCATTCTTGTTATTCACATGAGCGTGCACTTCAACAATTACAGTTGCGAAGTATGTGGCTCTTGTTTTATGACGCTGAGGCTACTGAAGAAACATTTAGAGGTGCACGAGACAGGGAATTTCCCTTGTGACCGTTGCAACAAAGCTTTTAGCACACCGTACAAACGAACATTGCATATCCGAGGAGTGCATCTGAAACAGTTGCCGAGAAGGTGTCCAATCTGCCCTGAGAGGTTCAATTCTAATTACAAACGAACGATACATTTGCGAGATGTACATAAGCAGTCGACTAATGTGCACAAATGTGAAACGTGTGGTCGCGGCTTCAATTTGAGATATCATCTCATATGTCACACTAGATCTGTCCATCTCCAGGAGAGGAACCAGCAGTGCGACGTCTGCCATCACAGGTTCTGTAATAAGGAGTCCTTGAAGCGACATATGGTGATACATACTGGGGAAAAGAAACATAAATGTGATGTTTGCGGCATGGCGTTTCTGAGGCGGAAGAATTTGAAGGATCACCTGAGGTTGCACGACATAGGATTCCAAGAACTAAACTCGAAGATCACAATTAAAAACGAAGATGGCGAAGCAATTGAACTCACAGTATTCAAGACACCAATCGACTTGTCGGCACTACCGTATGAAGATGAAAATGTACCCACAAGTCATCACGAGGATGCCAAAGAAATTTCTTCACAAAAGAAAACAATCAAAGACACTGACGTAAAACTGGGAGACTTAATGTTACTAAAGAACCCTATTCCTTTAGGCAATATTGATTTGAAAAATGAAATTGATAAACAACCAGTAAATAAAGCAAAAGCAGTTAAGGAATACAAATTTAGGACAAACACAAAGAAATCTAAAGAGCAACAAGAATATTGGAAAGACAACGCATTGATCATATTCGAAAATTCATTTGTGTATCCGTTCATTCACGGCAGTGGTGTCACATACAAATGTTTCATGTGCTCCAAACCATTCCTAGACCCCACATTATTGCAAAATCACAGCATCAACGAACACACTTCTAAAAACTTGAAGCAGGAACTGTACAATAGAGTCAGACTTCATCATTTAAAAGTCGACGTCACTAATTTACAATGCAGAATTTGTTCGCATTCTTCATCCGACTTGAGCAGTCTCATAACACATTTGAACGGTCACGGTAAAAATATAAATACCACATACGAGGCGAATCTAATACCTTTCAAATTGGGGTGTTCCAATAACGATTGCCAAGTGTGCGGGGAGAGATTTCTCAAATTCAGACTTCTTGTTACACATATTAGTAAACATTACAATAACTACACATGTGAAGTATGTGGTTCGGTTTTTATAACACTCGATCTACTCAACAAGCATCGCAAGAAACACGAGACAGGTAGCTTCGCGTGCGACAAATGCGACAAAGTATTTACAAATACGGACAAAAGAGCTCGGCACATGCGTGCGGTTCACTTGAAGCGGTTATGTAGACGATGTCCTATCTGCTCTGAGAGATTCATTTGTAATTATCAAAGGGCGAAACATCTGAGGATAGCGCACAATCAGACAGCCGGCATGTATTGTTGCGATGCATGCGGGCGGGAGTACGACCTGAAACAGCATTTGTTGATTCATATAAGAGCCGTACACTTACAAGAGCGCAATCACGAGTGTTCGGTCTGTCACTCGAGGTTCTTCACGAAGTCGTTGCTATCCAGGCATATGGTGACTCATACAGGGGAGAAAAAGTTTAAGTGTGAGCTTTGTGGGAAGGCTTTCGCTCGACGGCGCGGCGTGATTGCGCATAGCAAGTCGCACGAAGTATGCTGTGCTGTTTGTGGACAGAATTACGGAGATCAACGGAGTCTGGTTGCGCATATGAATAGTGTACATGGAGTATTGTAA
- Protein Sequence
- MFILRYFSFLDDAQSPDEDNLKENDIEPDNEKSIAERKNFTDDLKSRKKHAVMLLECSRICPFRWMKNLYLCFYCDQQFSDPEILRSHNSEHDSINSSQIKYALSKLKKYELVKVDITELSCKLCSDATTDLASLKLHLLEKHMKNLDLKASDGLLPFRLTNEELHCAMCEDKYAEFKSLNQHMNVHFQNFICEQCGTGFITPERLRTHAFSHETGAFACDSCDKVFRSSNAKNEHYATVHMKVKRHRCPHCPETFRNYFQRNKHISSFHGLKLKEFKCTMCPKVFTLSGKLGVHVRTVHLKMKRHSCNVCEWKFYSKSELKEHMVRHDGERKYQCSICKKCYARKYTLREHMRIHDNDRRFVCTICGRSFVQNCSLKHHTKIHHPNVVLVVRTTTPILADGSQRRIVPLFQVAYDRNLCRPLGTITDFSKLIRTKATLSRRDFTPSRSVTPLVSHSPTSYIDIPLESQDILEKKQPDIRQNALTIFEFSTVYPFIYGNNKFKCFICSQPYLDINLLKDHMRDLHLFAPLKRLVNNRKENVLKVDVSDIKCKICSTQLVTFSQLKIHLKGHGKLINLDIQDNLIPFNLELIDGTYRCVICEQSFIKVRILVIHMSVHFNNYSCEVCGSCFMTLRLLKKHLEVHETGNFPCDRCNKAFSTPYKRTLHIRGVHLKQLPRRCPICPERFNSNYKRTIHLRDVHKQSTNVHKCETCGRGFNLRYHLICHTRSVHLQERNQQCDVCHHRFCNKESLKRHMVIHTGEKKHKCDVCGMAFLRRKNLKDHLRLHDIGFQELNSKITIKNEDGEAIELTVFKTPIDLSALPYEDENVPTSHHEDAKEISSQKKTIKDTDVKLGDLMLLKNPIPLGNIDLKNEIDKQPVNKAKAVKEYKFRTNTKKSKEQQEYWKDNALIIFENSFVYPFIHGSGVTYKCFMCSKPFLDPTLLQNHSINEHTSKNLKQELYNRVRLHHLKVDVTNLQCRICSHSSSDLSSLITHLNGHGKNINTTYEANLIPFKLGCSNNDCQVCGERFLKFRLLVTHISKHYNNYTCEVCGSVFITLDLLNKHRKKHETGSFACDKCDKVFTNTDKRARHMRAVHLKRLCRRCPICSERFICNYQRAKHLRIAHNQTAGMYCCDACGREYDLKQHLLIHIRAVHLQERNHECSVCHSRFFTKSLLSRHMVTHTGEKKFKCELCGKAFARRRGVIAHSKSHEVCCAVCGQNYGDQRSLVAHMNSVHGVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -