Basic Information

Gene Symbol
-
Assembly
GCA_905333125.1
Location
HG995419.1:3690127-3692499[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.3 2.9e+03 -1.4 0.0 22 33 234 246 231 250 0.78
2 5 3.4e-09 4.4e-06 26.8 0.1 1 44 265 310 265 312 0.94
3 5 3.6e-06 0.0047 17.1 0.2 2 44 319 365 318 367 0.93
4 5 6.8e-10 8.8e-07 29.1 0.0 1 43 371 413 371 415 0.97
5 5 7.4e-06 0.0097 16.1 0.0 3 44 423 466 421 468 0.91

Sequence Information

Coding Sequence
ATGATGGATTTAGAGATTGAGAGTGACGAAGACGAGGAGCAGTTAAACGACCTGAAGCACCTCAAAGCAGTGTTGGACGCGGACGAGGCAAGTACAAATGAATCTTTAGCTCAATACCCGGCCTCCGTCGCCAGTACTTCAACTCGTACAGCTCCCCATACCTCGGTCGTTTCACATGCGACCACAAACGAGCCACGCAAAATTGAATCCGCGTTAGCCCTGAACAGATTATATGATGAGAAATTGAAACGACTAGAGAAAGTCCTCAGTGCGCGCCTACTAGAATGCCGGAGTAAACTGAAAGATATCCAAGGTCAGACCCCCGTTGCAGATAAACAAGAATCATTCCGCTATGTCAACTGCGGCAAGCCATATTTCAGGGACAAGGCAAACTTCCCTGCTCCCGATAATGATGATACTATAATGATCAAATCCCAGATGTATGATTTTTCACAAATAATGTCCGTGCCCGGATGGACAGTCAAAGATAAAAGTCAGTTTATATCAATGATGCTTAAAATGTCCAAGGACATTAGGAAGGATGAACTGCGATCGAAAATAGCAGCATTGAAGCGACAAAATAGAACAAATAAAGTAAACAACAGTAACAAATCAGAAATAGAGGCACTTGAGAGAGAGGTAACTCGTATAAAAGATCAACCCCTCAATGAGTTAGCTCTCCCCTTGGATAAGGAATATGATTGGGACACATTAGCCAATAAGCTAAATAGGCGGCACACACCACAGGAATATCAGGCCCTCTGGAAGTTATTCTTTCATCCTTCAATCAACAAAAATAGCTGGAGTATAGAGGAGCATGGAGCTCTACAGTCCATTGCAAGGGAGTACCATCAACAGGACTGGGATGTGATAGCTAAGAAACTGAACACCGGGAGGACGGGTTACCAGTGCTTTGTCTACTACAAAACCAATATGACCAATGTTACAAATGGACAAAAATGGTCTCATGAAGAGGTGACATACCTCAAAAGATTGATTGAATACTTCCGACAGGATAATTACATACCTTGGGGAAAAATAGCGGCAGCCATGGAAAATAGGAATAAAATTCAAATTTATAACAAATACTTAAGACTTGTTGAAATAAGGAAGGGCAGGTTCCTCCCTGAAGAGGATGCGGTGATACTGAATTGTGTGAACAGGTTTGGGGAAGATTTTAAAAAGATGACCCATTACCTACCAGGTAGATCACTGAGCCAATTGCGTATAAGATATAGAGTTATTAATAACTTTAGAATTTCAACAGTATGGAGTGTGGATGATGACCGAAAATTGATGCAAATTATTAGCAATCAGGATTCTGAGGCAGCTTTTTCTGATGCTACTAAACATTTCCCGGGTAAAACTAGAACAAATATAAGGTCTCGATATGTCACATTGGCTAAGTGGACTAGAAGGAATCCACAATTAGACATTCAGTATGCGCCGAGACGCGGCGCGCGACGCTTGAACCACGGACTAGCCTCTGACGATTTGAATAGGGCTATAGAAAACTTAAAAAATACCCTCCAAGCAGTAGCCGAAGTCAAAACAAGTAAGAAAAGAATTACAGAAACTTCAAGTGAAATGGACATAGAAGATGCAATTATAGCTACATTAATAAATGAACGGCTCAAAGAAGAAGAAATAAAAAAGCACTCTCTTGGTGATACAGAGGGGAGCATAGTTATGGACAACAACCACCCAACATCACCTAGTGCTTTAAACTCTACCAACCTGAGTAAGTGTTTAGTTATTTTAGAGTCAAGATTAAATAGAGACAAATTTAATGAGAGTAAGTTTAGAGACGAACACCCGCGATTAGGGGTTGTGGATCAAGAAGTCTGTTTGGTCCGCGTTAAATCTTATTCTAGAAAAGAAATGTTGTCAACAATAAAAGTTGATGGTACACCCGATGTGTGGGGTAACATTCTTCTGACCCGAAGAACATATGTACTGCCGCCGCACTACGCTACGATAACGGGATGTAGAGCGCTAATGGCATACGTCACTGGCTCCGTGAATAATCTTCCTAATATAAATGTGATGATAAGAAAAAATGCTATTCTGAAGCAAGAGTATGATAAACTTGTCGATCGTTTTTACATTCTGTTCCTGTGGCCGATGCTGCTGTCTAACGAAGGCCCGGGTAAACCCACAAATATGACAAAATCTGAAAAATGTAAGAGGCCCCTTATACCGTCGACGTCTTCAGCGTCCTCACTGTCAACAAGTGCTAAAGTTCATAGGAAATATAAAGTTAGTGAAGTGGCACCTGATGGTATTATAGATCTACAAGACACGGAAGAGAAAGATGATATAACTGTAAAAGAAAATCTGTCTAACTTGACTGGCGACTATAAAATAAAGTAA
Protein Sequence
MMDLEIESDEDEEQLNDLKHLKAVLDADEASTNESLAQYPASVASTSTRTAPHTSVVSHATTNEPRKIESALALNRLYDEKLKRLEKVLSARLLECRSKLKDIQGQTPVADKQESFRYVNCGKPYFRDKANFPAPDNDDTIMIKSQMYDFSQIMSVPGWTVKDKSQFISMMLKMSKDIRKDELRSKIAALKRQNRTNKVNNSNKSEIEALEREVTRIKDQPLNELALPLDKEYDWDTLANKLNRRHTPQEYQALWKLFFHPSINKNSWSIEEHGALQSIAREYHQQDWDVIAKKLNTGRTGYQCFVYYKTNMTNVTNGQKWSHEEVTYLKRLIEYFRQDNYIPWGKIAAAMENRNKIQIYNKYLRLVEIRKGRFLPEEDAVILNCVNRFGEDFKKMTHYLPGRSLSQLRIRYRVINNFRISTVWSVDDDRKLMQIISNQDSEAAFSDATKHFPGKTRTNIRSRYVTLAKWTRRNPQLDIQYAPRRGARRLNHGLASDDLNRAIENLKNTLQAVAEVKTSKKRITETSSEMDIEDAIIATLINERLKEEEIKKHSLGDTEGSIVMDNNHPTSPSALNSTNLSKCLVILESRLNRDKFNESKFRDEHPRLGVVDQEVCLVRVKSYSRKEMLSTIKVDGTPDVWGNILLTRRTYVLPPHYATITGCRALMAYVTGSVNNLPNINVMIRKNAILKQEYDKLVDRFYILFLWPMLLSNEGPGKPTNMTKSEKCKRPLIPSTSSASSLSTSAKVHRKYKVSEVAPDGIIDLQDTEEKDDITVKENLSNLTGDYKIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01179439;
90% Identity
iTF_01179439;
80% Identity
-