Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.2 2.9e+03 -2.0 0.2 7 12 52 57 50 57 0.81

2 3 0.7 1.6e+03 -1.2 0.0 10 19 70 79 69 81 0.86

3 3 6.8e-20 1.6e-16 59.7 6.8 1 35 98 131 98 132 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.2	2.9e+03	-2.0	0.2	7	12	52	57	50	57	0.81
2	3	0.7	1.6e+03	-1.2	0.0	10	19	70	79	69	81	0.86
3	3	6.8e-20	1.6e-16	59.7	6.8	1	35	98	131	98	132	0.97

Coding Sequence: ATGGCTTCCGCGGATACGGCCAATGGGAGGCAGGGGGCGGCGAGGGGCGCGGGGCGCGCCGCTGCATCTTCGCGTGAAAATTTAAAAATTACGAGCACCGCTTTTATTTTTATGAGCGCTTCGACGATACTTGCTGGCGCCCGTCCACGGAGAAATAAAACCACCCAGTGGGGTGGAGTGACTCCTATAATCAGCTTAGAGCCAGCCCCTCAGATCCGCCAGTCTCCCTCGGGAGCCGTGCGTGATGCACCCGTTTCGCTACAGAGCGCGGCGCGGCGCGCGGGCACCTCCTGCGCGAACTGCAAAACCACGACGACGACGCTATGGCGGCGCAACCAGAACGGAGAGCCAGTGTGCAACGCCTGCGGACTCTACTACAAGCTGCATAATGTGAGTCACACCTTTATTACAGAGTACTAA
Protein Sequence: MASADTANGRQGAARGAGRAAASSRENLKITSTAFIFMSASTILAGARPRRNKTTQWGGVTPIISLEPAPQIRQSPSGAVRDAPVSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVSHTFITEY

Sequence clustering based on sequence similarity using MMseqs2