Basic Information

Insect: Pheosia gnoma
Gene Symbol: -
Assembly: GCA_905404115.1
Location: FR989916.1:3418000-3426054[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.9e-06 0.00022 21.5 0.7 1 23 257 279 257 279 0.99

2 9 0.32 18 6.0 1.5 1 23 287 310 287 310 0.90

3 9 0.04 2.3 8.9 5.1 1 23 412 434 412 434 0.99

4 9 0.0021 0.12 12.9 0.8 2 23 443 465 442 465 0.95

5 9 0.64 37 5.1 4.4 1 23 469 491 469 491 0.98

6 9 9.5e-05 0.0054 17.2 3.6 1 23 496 519 496 519 0.98

7 9 0.0015 0.085 13.4 0.8 3 23 525 546 524 546 0.95

8 9 0.079 4.5 8.0 0.2 1 20 565 584 565 586 0.94

9 9 1.5 88 3.9 0.0 3 23 649 670 647 670 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.9e-06	0.00022	21.5	0.7	1	23	257	279	257	279	0.99
2	9	0.32	18	6.0	1.5	1	23	287	310	287	310	0.90
3	9	0.04	2.3	8.9	5.1	1	23	412	434	412	434	0.99
4	9	0.0021	0.12	12.9	0.8	2	23	443	465	442	465	0.95
5	9	0.64	37	5.1	4.4	1	23	469	491	469	491	0.98
6	9	9.5e-05	0.0054	17.2	3.6	1	23	496	519	496	519	0.98
7	9	0.0015	0.085	13.4	0.8	3	23	525	546	524	546	0.95
8	9	0.079	4.5	8.0	0.2	1	20	565	584	565	586	0.94
9	9	1.5	88	3.9	0.0	3	23	649	670	647	670	0.89

Sequence Information

Coding Sequence: ATGTACGACCTAAAAGCGTGTATGGTGTGTCTTAGTACCGATTTGAAATTATATAATATGAGTAGCAGTCGTCTTCGACAGGAATACAATCTGGTTTCTGGGCTTCAGGTGTCTGTCGGCAGCGGTATGCCGAACTATTTGTGTTATGTTTGCACGGCTTATGTGAGGCGCTTCAAAAAATTTCGGGACAAATGTCATCGAACTCATTATTTATTGCAAGAAATACTAGAACGAAATAAAGAGATAAATGAATCCCACATAAATAATTTAAATTGTGAAAATCTAGATATAGCACCAACATTATCATATATAGATACAAATATAAGTCACTACCATGAAACCAAGTTTCAATGGACTAAGTTAAACAGGAGCGGAATTAAAGGGGAAAGGATACCAACAGTCCAATACAATACAGTCACAAACAGTGACAGCTTTACAAATACCGCTAACGTGGAGATAGAAATTAACGAGAACAATATTAAAACAGACACAGAAGAATTTCTAAAGCAGCTTCCAGATAACACAGAAGATGTGACACATCTGCCAACATCAAAGATAGAACTAACAGATTTGTTCTTAGACAATGACAACGACTCAGACAATGGGCAGGATGGCATTGAGGTTTTCACTCATACACCTTGTAAGGTTGAGAAGGATGAAGATGTTGACGGTTCTGTTTTGGATGAGGAGTATGCAACTATGGTACCAATATCGAGTAAGGAGGCGAAAGCGGCTGTCGAGGTGTACAGGATGTTCAGTACGGGGAAATACAAGTGCCGTGTATGTGGCAAGGGATATTCCAATGAGAATCGTTTGAACATTCACATGCGTATGCATGATATGCATGTTAGCGGCAGCTTTCTGTGTGAACTGTGCAATTATTACTACAAAACTGATTTCCTTCTGACAACTCATGTGACTCAGAAACACATGTACAAGTATCTGTGCAAGAAGTGCCCTGAAGTCAATTTTGACAGAACATCAGCGAAACAACATTATATCTGGACGCACCTGCAAAAAGGCGAAAAGAAAAACGCCAACTGGTACGAAACACGACCAAACTGGCTGAGCACTAAAGGTGGCAAACGGGTCAAGGGAGTTGTATCCTTAAGACCTGTAAGAAAACTAAAGAAATTGCCAGAAGACTTCTTAATTTATTCACCTATCGGCCACGAGGAACAGTATACTCTGGTGTTGGATCGACAAAAGAGCAGGAACTATAAGGATGCTAAATATAGATGCCATTTGTGCTTCAGAGGATTTCAAGTGATGACCACTTATAACAATCATATGAAGAAACATGATCCAGCGGTGGCGGGCCCGCTGGAGTGCGACGTGTGCAGGGTGCGCTTCCGCAACCAGCGCAAGATGTACAAGCACATGATCATCACGCATCTGTTCAAGTACTCGTGCCAGTTGTGCAGCTATGTGTGCTATAACAGGGGCCAAGCACATATGCATTATAGATGGCATAAAAATGTCACGTACAAATGTCCGCATTGTGACAAAGAGTTCAAAAAAATGTCGACGCGTCTTACTCACATACGAATAAAGCACCCATCAATGAATATCTGCCCGATGTGTGGACACAGCTTTGTGAGTGAGACCGGCCTTTATCATCACAAGCTGATAGTGCATACCCAGGAGGAGATAGAGTTGATCAACAACCGGAGCACGAGCACCGCGGGCCCGCACTACTGCGCGGAGTGCGACATTCAGTTCATGAACGAGTCCGCCTTCAGCACGCACCTCGGCAGCTCCAACAAACACGCTGTCACCAATCTGTCAATCCAGGCGAGCACGCGGGTCAAGTCGGCGGAGCAACGGGCGAGCGCGGGGGCGGGCGCGGGCGCGGGGGCGGGGGCGGGGCTGCGCGCGCGCGGCCGGCCGCGCCGCCTCGCCGCCTCCGAGATACTCAACAACGGCGCCACCACGCCCACCATATGCGAAGTGTGCGGCGTGTCGCTGCCGAACGACGTGCAAGCGCGCCGCCACTACGAGGCGGAGCACCCCGGCACCGAGTTTTAA
Protein Sequence: MYDLKACMVCLSTDLKLYNMSSSRLRQEYNLVSGLQVSVGSGMPNYLCYVCTAYVRRFKKFRDKCHRTHYLLQEILERNKEINESHINNLNCENLDIAPTLSYIDTNISHYHETKFQWTKLNRSGIKGERIPTVQYNTVTNSDSFTNTANVEIEINENNIKTDTEEFLKQLPDNTEDVTHLPTSKIELTDLFLDNDNDSDNGQDGIEVFTHTPCKVEKDEDVDGSVLDEEYATMVPISSKEAKAAVEVYRMFSTGKYKCRVCGKGYSNENRLNIHMRMHDMHVSGSFLCELCNYYYKTDFLLTTHVTQKHMYKYLCKKCPEVNFDRTSAKQHYIWTHLQKGEKKNANWYETRPNWLSTKGGKRVKGVVSLRPVRKLKKLPEDFLIYSPIGHEEQYTLVLDRQKSRNYKDAKYRCHLCFRGFQVMTTYNNHMKKHDPAVAGPLECDVCRVRFRNQRKMYKHMIITHLFKYSCQLCSYVCYNRGQAHMHYRWHKNVTYKCPHCDKEFKKMSTRLTHIRIKHPSMNICPMCGHSFVSETGLYHHKLIVHTQEEIELINNRSTSTAGPHYCAECDIQFMNESAFSTHLGSSNKHAVTNLSIQASTRVKSAEQRASAGAGAGAGAGAGLRARGRPRRLAASEILNNGATTPTICEVCGVSLPNDVQARRHYEAEHPGTEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00622290;
90% Identity: iTF_01180745;
80% Identity: -