Basic Information

Insect: Pheosia gnoma
Gene Symbol: -
Assembly: GCA_905404115.1
Location: FR989921.1:3714981-3741124[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.7 99 3.7 0.0 2 23 493 514 492 514 0.93

2 17 0.00096 0.055 14.0 0.0 1 23 524 547 524 547 0.95

3 17 5.2 3e+02 2.2 1.4 2 21 638 657 637 658 0.92

4 17 0.038 2.2 9.0 3.8 2 23 721 742 720 742 0.95

5 17 0.00087 0.05 14.1 2.7 3 23 786 808 784 808 0.94

6 17 0.046 2.6 8.7 0.2 1 23 814 836 814 836 0.92

7 17 0.0023 0.13 12.8 3.3 1 23 842 864 842 864 0.98

8 17 4.3 2.5e+02 2.5 0.0 2 20 875 893 875 895 0.88

9 17 0.2 11 6.7 0.2 1 23 974 996 974 996 0.97

10 17 2.2 1.2e+02 3.4 7.2 1 23 1003 1025 1003 1025 0.95

11 17 0.0015 0.084 13.4 1.8 1 23 1064 1087 1064 1087 0.95

12 17 0.00028 0.016 15.7 0.9 1 23 1094 1117 1094 1117 0.98

13 17 0.0022 0.12 12.9 0.3 2 23 1139 1161 1138 1161 0.96

14 17 0.00011 0.0061 17.0 0.1 2 21 1190 1209 1189 1210 0.94

15 17 0.00032 0.018 15.5 1.2 1 23 1217 1239 1217 1239 0.96

16 17 0.00013 0.0074 16.7 0.1 1 23 1245 1267 1245 1267 0.97

17 17 0.00067 0.038 14.5 0.6 3 23 1275 1296 1273 1296 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.7	99	3.7	0.0	2	23	493	514	492	514	0.93
2	17	0.00096	0.055	14.0	0.0	1	23	524	547	524	547	0.95
3	17	5.2	3e+02	2.2	1.4	2	21	638	657	637	658	0.92
4	17	0.038	2.2	9.0	3.8	2	23	721	742	720	742	0.95
5	17	0.00087	0.05	14.1	2.7	3	23	786	808	784	808	0.94
6	17	0.046	2.6	8.7	0.2	1	23	814	836	814	836	0.92
7	17	0.0023	0.13	12.8	3.3	1	23	842	864	842	864	0.98
8	17	4.3	2.5e+02	2.5	0.0	2	20	875	893	875	895	0.88
9	17	0.2	11	6.7	0.2	1	23	974	996	974	996	0.97
10	17	2.2	1.2e+02	3.4	7.2	1	23	1003	1025	1003	1025	0.95
11	17	0.0015	0.084	13.4	1.8	1	23	1064	1087	1064	1087	0.95
12	17	0.00028	0.016	15.7	0.9	1	23	1094	1117	1094	1117	0.98
13	17	0.0022	0.12	12.9	0.3	2	23	1139	1161	1138	1161	0.96
14	17	0.00011	0.0061	17.0	0.1	2	21	1190	1209	1189	1210	0.94
15	17	0.00032	0.018	15.5	1.2	1	23	1217	1239	1217	1239	0.96
16	17	0.00013	0.0074	16.7	0.1	1	23	1245	1267	1245	1267	0.97
17	17	0.00067	0.038	14.5	0.6	3	23	1275	1296	1273	1296	0.95

Sequence Information

Coding Sequence: ATGTCGGAGCTCCAGCCGTTGATTCTATGCATGGAGAACACCACGGGCGAGGAAGTGACACTGAGGATTGAGCCCGAAGATAACTTCCAAAATTTCTTGGACAAAGCCAATACCGTCAACTTTTCAGTCAACACCGACATCCGACAAATACCGACATCCTTAATTAATTACAGATCTCTACTGGGCTACGAAATAGATATTAACTCAATATCGAGAAACCATCCCGTCTCTCTAAACGAGAACATATATCAATTCCTCATAAACACCGAACCGACACTACCGACAGAAATTGGGACAAACATTGACCCAATATTGGAGCCAACTGATGACGCTAACGATTTAGTATACATACTAGATGACGGTACCCAAATAAGGGCATCGCAGATACACTTTGATAACGAAGACCCTATAGTAGATCTAACGGCTGAAAAAATACCCTTCATAAAGTACATTGATGATATTGTAGACGACGATAATGATGGCGTTGACAGGGAGATTAAGAAAATTAATATAACAGCTAGTCCAGTGTTGCGTTGTTCTAGTAACGACAGTCCAAAATGTAGCTTCCTAAACTCGCTACCGTTCAAATTGGTGTGCAACAACACATTGGGATTCGAAGCACAATTCAATAAATACTTAGAAGCGAACCACAAGACGTATGCAACACTAAATACAGTAACCACACGCAACAAATCACCTAAAAGCTTGATCAAAGACAACTTCAAGAACTATGATTATCAGAGAAACGACAATTTTACCAGAGAGGACATTTTGAATATGTTCAAAGACTCTCCTATGACGTCAGTGCCGTACGACCAAGGGCATACCGAAAGAAGGCACGTTAGGAAGACAGACCCGTCTAGAGTTGTTCATAAGAATTGGTCCAAGCCCATATCGTATGTCGATATCGATGGTATGTTAATAGGGGACAATGAGAGCCAGTCGTGTTTCATATGCGCCAAACACGTCGATAATACCATAGACAAGCTGTACCTTTTCGATAACGAAGACCAGAGACTGCATAGATGTTCGCCCCAGAAGAAAATGTCGACCCAATTGAAGATTATCTGTGAGAATTGTCTGAATGAGTATTTTAAGCCTAGTCGTATGAAAAGTGCGAATCAATTCTTGGCCTCCGATGAATTTTTGGTCATAAAAAACAATCAGCAATACATTTTTCAGAAGATCAAACATTTTAGCGTCAATTTTGGTAGCATGAACAAGATTGACAAAGATGAATTCGTGAAAGTTGAAATTGGTTCGGACGGAGAGATAATAACTAAGCCGGTCAACGACCCGAGGTCCGATGACGTCATAATAGTTAAGGATGAGACCAAAGAGGGTAGTTCGAGTGACGTTGAGATCATAGAGCCGGAGCCGGAAATAGACAATATCATAGACAATTTGGAGGAAGCGGACGAGGAAGTGAAGGAGTTCTTGGGGAAGTACCAGTGTGATAGTAATGTTGGTGAACTTAAATGCAGGTTCTGTGAGCGTATATTTGCCGATGTACCAGAAGTGATGGAACACGGCGAAACTCACAAGCACGAGTTGGAAGATGAAGAAGTGTTTCCGTGCCCACTCTGCAACTATGGTTATGCAAACTTGAAATGGCTGAAAGCACATTTGAAAGCAGCCCATGAGGCAACCAAACCAATAGATGATAAAGAAGAAACTATAAACAAAGAAACAGAGAAGAATCGAGAAGAGAATAAACTAGAATCGAATAACGAGTCGGCTGGAACCCTCATCATGAAGACGGAAGTGAAGCAGGAGTGTCTGGACAGCAGTGAGGATGAGATTTGGATAGTTCATACCGCTGACGCCGAAGCGCCCCAGGAGTTGCAGCAACTGCTCAATGCTGCCAAGGTGGGCGACAGTTCGCACAATGGCGGTACGGGAGAGGCGAAGAAATGCTTCAATTGCAGTCAAATATTCCCAAATGTGGAAACGATGAGCGCGCACCGGTGTAGAAAACGCGGAAGGAAGCGGAAGACGAGGGAAGACGACAATTTCATATGCATTCCCACGCAGGAGGACTTTATAAAGCGAGCACAAGGTCGCCTCCGAAAAGTGAACACATCAGCTGATAACGATCTTCTTATAGCGCGTCCACGCAAGAAGCGCAGCAAGGGACCCACCTCCGACCCTCACATCGTGACCTGCCACAACTGCAACGAGTCATTCACCTCCAAAGTTCGACTCAAGTTTCACATGCAGTTCCACGAGTCCCCGAACCCGCTGTCCGCGGACGGTCAGTACGGCTGTTCCCAGTGCAGTGGCGCTAGTTTCGCGACGGAAACAGCGCTCTTCGACCACGTACACTTCCAGCACGACAAGCACCGCCGCTGGCACTGCCCGGTGCACGGCTGCGGGAAGACCTTCTATCTCAGGGCGACGCTCACAAAGCACAGCCGCACGCACACGGACACGCGGCGCTACGCGTGCGACACGTGCGGCAAGCGCTTCCTGGACAAGCAGACCCTGGACGAGCACGGAGTCACACACTTGCAGATCAAGCCCTTCCAATGCCACATCTGCCTGAAGCAGCTGACGCGGCGCTCGCGCCTGCGCATGCACCTGCGCGCGCACGAGGAGGAGCTGGCGCCGGCGCTGCTGCGCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCACGCCTCCGCGCAGGAGCACGCCCTTAAATCATCGGAATGTATGGAAGCGTTTGCCAGCGAGCTGAAGGAGGAGGCTGAGGAAGTGACCGTCCAACTGTCGCCCACAAGTGGGCTAGTCAGCCACACTGTGCAAATTGTTGAGTCTCCGAAGCTGTCGAAGCCGGTAGTCCGTCAAGTGGCAAGTCCTAGAGCCGAACCACTATTGTCGACTCTGTGCGACGAAGCGCGCGCGCTGATACGAGTGGTCGAAATTGAGAAAGCTTTCCGATGCGAGTATTGTGAAGACGTGTTTTACTTGGAGAACGGTTTGAACACCCATCGCGCGATACACAAGAACGTGAAGAACCCTTTCACATGCCATATATGTAAAGTGAGCTTCGCCACGTATTCCAGATGTACCACTCACAAGACGACTCATGGCTTCTACAAGCGGTCCCTGGCGGAGGCCAAGAAGCAGCCCTCCACGGAGTCCTCCGCGGGGCCCTCCGCCACCGGCATCCTCGGCTATGGGGACTTCCCCGTCGTGAAACACTTCCTCTGCGAGGACTGCGGTCGTTCGTACTTACATTGGACATATCTGCAAGTCCACCGGCGCATGAAACACGCCAACGAGAACTTCCTGTACAAGTGTAACCAGTGCGAGCTGACCTTCCCCAACAGTTGGAGTTTGGCGTACCACCGAAAGAAACTACACGGCAAGAGTGGCGCCGACGAACCGGGTGCCACATCTAAAATACCCATCGAGGACTACAGAATTCAATGTCGCGACTGCGATGAAGTGTTGCCAAACAAAACTGCTCTCTACAAGCATAGGAAGAAGGAACACAGCGACATGTCCTTGTGTATGAATATAAATAGTATTAGCAGCGACACTAGCGCCACAAGACAGAATATGCGCGACTCGGATCTAACGTGCACGACGTGCAACAAATCGTTCGCGAGCCGGTCGGAGCTGAGCGCGCACGCGCGCGCGGCGTGCCCGCGCCGGCCGCACGCGTGCCCGGTGTGCGGGCACGCCTTCCGCACGCTGTCCATGCGCAACGAGCACCTGCGCGTGCACACCGGCGAGCGCCCCTTCCCCTGCGACGTGTGCGGCGTCGCCTTCCGCCGGTCGACGGCGATGCGCAACCACCGGCTGATCCACACGGGCGTGCGCGCGTGGGCGTGCGCGCGCTGCCCCAAGCGCTTCCGCATCCGCTCCGAGCTGCGCACGCACCTGCGCCTCAAGCACCCCGCCACCCTCGCCGTCATACAGATGCGCGGGCTGGACCCCACTCCCGAGGAGGTGATGACCCAGCTCGCGGCGAACCACATCCCGCACGACAAAGTCATTGAGATCACAAAGATATCGTTCCCGAAGGGCACGTGCGGCGTGGTGCCCAGCTGCGCGCGCGCGCTGGCCGCGCTGGCCGGCGCCGGCGCGCCGCGCACGCGCCTGCCGCTCGCCCGCCCCGCGCACCCGCCCCCGCCCCCGCCCCACCCGCCCCACACGCCCCACCCGCCCCACACGCCGCGCACCGACGAATTCGTCCCCACCCGCCGTGGTAGGGGCATCGCCAAGAACCCGCGGCGGCCGAAGATATTGCAACGGGCCGATTTACACCACGACACCGCCGCATCTGCCTACCCCATAGCTGTCAATGTGACAGGCGAGGAGTTATCGGACCTGAACATGCAGCTGCTGCTTCGCGAAGGTGTCATGATCGGAACACAGATGGTTCAGTTGCAATCAGATGACCCGGTGCTGTTAGAATAG
Protein Sequence: MSELQPLILCMENTTGEEVTLRIEPEDNFQNFLDKANTVNFSVNTDIRQIPTSLINYRSLLGYEIDINSISRNHPVSLNENIYQFLINTEPTLPTEIGTNIDPILEPTDDANDLVYILDDGTQIRASQIHFDNEDPIVDLTAEKIPFIKYIDDIVDDDNDGVDREIKKINITASPVLRCSSNDSPKCSFLNSLPFKLVCNNTLGFEAQFNKYLEANHKTYATLNTVTTRNKSPKSLIKDNFKNYDYQRNDNFTREDILNMFKDSPMTSVPYDQGHTERRHVRKTDPSRVVHKNWSKPISYVDIDGMLIGDNESQSCFICAKHVDNTIDKLYLFDNEDQRLHRCSPQKKMSTQLKIICENCLNEYFKPSRMKSANQFLASDEFLVIKNNQQYIFQKIKHFSVNFGSMNKIDKDEFVKVEIGSDGEIITKPVNDPRSDDVIIVKDETKEGSSSDVEIIEPEPEIDNIIDNLEEADEEVKEFLGKYQCDSNVGELKCRFCERIFADVPEVMEHGETHKHELEDEEVFPCPLCNYGYANLKWLKAHLKAAHEATKPIDDKEETINKETEKNREENKLESNNESAGTLIMKTEVKQECLDSSEDEIWIVHTADAEAPQELQQLLNAAKVGDSSHNGGTGEAKKCFNCSQIFPNVETMSAHRCRKRGRKRKTREDDNFICIPTQEDFIKRAQGRLRKVNTSADNDLLIARPRKKRSKGPTSDPHIVTCHNCNESFTSKVRLKFHMQFHESPNPLSADGQYGCSQCSGASFATETALFDHVHFQHDKHRRWHCPVHGCGKTFYLRATLTKHSRTHTDTRRYACDTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELAPALLRVCAVCARAFRDHASAQEHALKSSECMEAFASELKEEAEEVTVQLSPTSGLVSHTVQIVESPKLSKPVVRQVASPRAEPLLSTLCDEARALIRVVEIEKAFRCEYCEDVFYLENGLNTHRAIHKNVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLAEAKKQPSTESSAGPSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKLHGKSGADEPGATSKIPIEDYRIQCRDCDEVLPNKTALYKHRKKEHSDMSLCMNINSISSDTSATRQNMRDSDLTCTTCNKSFASRSELSAHARAACPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACARCPKRFRIRSELRTHLRLKHPATLAVIQMRGLDPTPEEVMTQLAANHIPHDKVIEITKISFPKGTCGVVPSCARALAALAGAGAPRTRLPLARPAHPPPPPPHPPHTPHPPHTPRTDEFVPTRRGRGIAKNPRRPKILQRADLHHDTAASAYPIAVNVTGEELSDLNMQLLLREGVMIGTQMVQLQSDDPVLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01180609;
90% Identity: -
80% Identity: -