Basic Information

Insect: Pheosia gnoma
Gene Symbol: -
Assembly: GCA_905404115.1
Location: FR989898.1:11132836-11141515[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00075 0.043 14.3 4.1 1 23 172 194 172 194 0.98

2 11 1.7e-05 0.00097 19.5 0.4 1 23 200 222 200 222 0.98

3 11 6.7e-05 0.0038 17.6 1.7 1 23 228 251 228 251 0.96

4 11 0.028 1.6 9.4 3.3 1 21 257 277 257 279 0.95

5 11 9.9e-05 0.0057 17.1 2.7 1 23 285 307 285 307 0.99

6 11 2.9e-05 0.0017 18.8 5.5 1 23 313 335 313 335 0.98

7 11 0.0049 0.28 11.8 0.5 1 23 343 366 343 366 0.96

8 11 0.13 7.3 7.3 2.8 2 19 373 390 372 391 0.89

9 11 0.00022 0.013 16.0 2.1 1 23 396 418 396 418 0.99

10 11 5.6e-06 0.00032 21.0 2.3 1 23 424 447 424 447 0.96

11 11 7.8e-06 0.00045 20.6 4.5 1 23 461 483 461 483 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00075	0.043	14.3	4.1	1	23	172	194	172	194	0.98
2	11	1.7e-05	0.00097	19.5	0.4	1	23	200	222	200	222	0.98
3	11	6.7e-05	0.0038	17.6	1.7	1	23	228	251	228	251	0.96
4	11	0.028	1.6	9.4	3.3	1	21	257	277	257	279	0.95
5	11	9.9e-05	0.0057	17.1	2.7	1	23	285	307	285	307	0.99
6	11	2.9e-05	0.0017	18.8	5.5	1	23	313	335	313	335	0.98
7	11	0.0049	0.28	11.8	0.5	1	23	343	366	343	366	0.96
8	11	0.13	7.3	7.3	2.8	2	19	373	390	372	391	0.89
9	11	0.00022	0.013	16.0	2.1	1	23	396	418	396	418	0.99
10	11	5.6e-06	0.00032	21.0	2.3	1	23	424	447	424	447	0.96
11	11	7.8e-06	0.00045	20.6	4.5	1	23	461	483	461	483	0.96

Sequence Information

Coding Sequence: ATGTCTCCTCCATCAAAGAAGGAGAAGACCAAGCAGACCCTAATTCGGCCTTATTTGGACCAAGGGACAGTGATTGCAGTGCAGCAAAATGGCTCCGGCGAGGAGGAGGACAACAACGGCATCACGTACTTCGTGGACGAGCAAGGCCGCTACTACTACCAGCCCGCCGGTAGCATGGCCGCGCTGCCAGCGGGCACGGCAGCCGACGCCGATGACGAAATAGAGGACAGTGAGATGATGGATGGAGATAACGAGGGTTACGAGACGGTGGCGCTGGTGCCGGCCGAGGGCGGCGGCGAAGTGAGCTACGTGTTCGTGGTGCAGGAGGAGAGCAAGCCCGTGCTCGGCCTGGACATCGACGTCGCCGAGGAGGACAAAGGCAACGAGGACGTGTACAACTTCGAGGAGGAGGAGGAGGGGGAAGAGGCCGCGGGGGAGCCGGAGGTGGAGGTGGCGGCCGAGAAGACCGTGCGGGCGGCGTCCAAGCGCGCTTTGAAACACATGCGCCCCAGCTTCGAGTGCAACTTCTGTCCGTACACGAGCCATCGCCGGTACCTGCTGCTGCGGCATATGAAGTCGCACTCGCAGGAGCGGCCGTTCAAGTGCAACGTGTGCGAGCGCGGCTTCAAGACGATCGCGTCGCTGCAGAACCACGTCAACATGCACAACGGCGTCAAGCCGCACGTGTGCAAGTACTGCAACAGCCCCTTCACCACGTCCGGCGAGCTGGTGCGGCACGTGCGCTACAAGCACACGCACGAGAAGCCGCACAAGTGCACCGAGTGCGACTACGCGTCCGTCGAGCTGTCCAAGCTGCGGCGCCACGTGCGCTGCCACACCGGCGAGCGGCCCTACCAGTGCCCGCACTGCACGTACGCGTCGCCGGACACGTTCAAGCTGAAGCGGCACCTGCGCACGCACACGGGCGAGAAGCCCTACAAGTGCGACCACTGCAACATGTGCTTCACGCAGTCCAACTCGCTCAAGGCGCACAAGCTCATACACAATGTGTCGCAGAAGCCGGTGTACGCGTGCGAGCTGTGCCCGGCCAAGTGCGGGCGCAAGACGGACCTGCGCATCCACGTGCAGAAGCTGCACACCTCCGACAAGCCGCTCAAGTGCCGCCGCTGCGGCAAGTCCTTCCCCGACCGATACTCCTGCAAGACTCACGAGGGCGAAAAGTGCTACAAGTGCGAGCTGTGCCCCTACGCGTCCACCACGATGCGCCACCTCACCTCGCACATGCTCAAGCACACCGACCAGAAGCCGTTCGTGTGCGACCAGTGCAACCAGTCCTTCAGGCAAAAGCAACTGCTCCGGCGCCACCAGAACCTGTACCACAACCCCAACTACGTGCCCAAGCCGCCGAAGGAGAAGACGCATTCGTGCCACGAGTGCAAGCGCAGCTTCGCGCACAAGGGCAACCTCATCCGCCACCTCGCCATCCACGACCCGGACTCCGGCCACCACGAGAGGGCGCTCGCGCTCAAGATCGGGCGCCAGAGGAAAATCCGATATACGGATGGAGAAATGAAGGAGGCGGGCGCGTCGTCGAGCTCCGAGCAGGCGGAGCTGGTGAAGCTGGGGCTGGGCGAGGCCGAGCTGCAGCGCGGCGAGCTGGTGACGGTGGCCGACGACGACGGCCAGCAGTACGTCGTGCTCGAGGTCATCCAGCTCGAGGACGGCTCCGAGCAGCAGGTGGCCGTCGTGGCGCCCGACTACCTGGACGCCCACGCCGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGTCGAAGAGAAGGCGCACGCCCTGGTGACCGCGCCGGCTGCCAAGGATAGCCTCGCCGAGCGCAGCATCAAGCTGGAGCACGAGGTCGACACCTGCTTCGGGTTTGACGAGGAGGAGGAGCCGGAGGAAGATGATAACTTCACTGACAAAGTGGTGTTGCGTCTGGTATAG
Protein Sequence: MSPPSKKEKTKQTLIRPYLDQGTVIAVQQNGSGEEEDNNGITYFVDEQGRYYYQPAGSMAALPAGTAADADDEIEDSEMMDGDNEGYETVALVPAEGGGEVSYVFVVQEESKPVLGLDIDVAEEDKGNEDVYNFEEEEEGEEAAGEPEVEVAAEKTVRAASKRALKHMRPSFECNFCPYTSHRRYLLLRHMKSHSQERPFKCNVCERGFKTIASLQNHVNMHNGVKPHVCKYCNSPFTTSGELVRHVRYKHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCDHCNMCFTQSNSLKAHKLIHNVSQKPVYACELCPAKCGRKTDLRIHVQKLHTSDKPLKCRRCGKSFPDRYSCKTHEGEKCYKCELCPYASTTMRHLTSHMLKHTDQKPFVCDQCNQSFRQKQLLRRHQNLYHNPNYVPKPPKEKTHSCHECKRSFAHKGNLIRHLAIHDPDSGHHERALALKIGRQRKIRYTDGEMKEAGASSSSEQAELVKLGLGEAELQRGELVTVADDDGQQYVVLEVIQLEDGSEQQVAVVAPDYLDAHAEEEEEEEEEEEEEVEEKAHALVTAPAAKDSLAERSIKLEHEVDTCFGFDEEEEPEEDDNFTDKVVLRLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01073824;
90% Identity: iTF_01180527;
80% Identity: -