Pgno002011.1
Basic Information
- Insect
- Pheosia gnoma
- Gene Symbol
- ZFY
- Assembly
- GCA_905404115.1
- Location
- FR989922.1:274093-282092[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.00023 0.013 15.9 2.4 2 20 162 180 161 182 0.93 2 26 0.055 3.1 8.5 0.2 1 23 215 238 215 238 0.92 3 26 0.00026 0.015 15.8 0.9 2 23 244 265 243 265 0.95 4 26 0.0005 0.029 14.9 0.4 2 23 331 353 330 353 0.95 5 26 4.3 2.4e+02 2.5 0.8 3 23 361 380 360 380 0.81 6 26 0.0048 0.27 11.8 0.8 1 23 386 408 386 408 0.98 7 26 0.042 2.4 8.8 1.0 1 23 414 437 414 437 0.94 8 26 0.00023 0.013 16.0 2.0 1 23 446 469 446 469 0.95 9 26 0.043 2.5 8.8 4.7 1 23 479 501 479 501 0.98 10 26 0.00013 0.0076 16.7 0.1 3 21 622 640 621 641 0.95 11 26 0.00044 0.025 15.0 0.3 3 23 674 695 672 695 0.91 12 26 0.014 0.8 10.3 0.2 1 20 699 718 699 719 0.94 13 26 7 4e+02 1.8 6.2 1 21 724 744 724 745 0.94 14 26 0.00057 0.033 14.7 0.0 1 23 757 780 757 780 0.94 15 26 0.00015 0.0085 16.6 2.0 1 23 786 808 786 808 0.98 16 26 2.9 1.6e+02 3.1 0.2 5 23 818 836 816 836 0.96 17 26 6.3 3.6e+02 2.0 1.0 1 23 842 865 842 865 0.90 18 26 0.0019 0.11 13.1 0.9 2 22 991 1011 990 1014 0.89 19 26 0.00017 0.0096 16.4 0.7 3 23 1046 1067 1045 1067 0.98 20 26 0.002 0.11 13.0 0.8 1 23 1072 1094 1072 1094 0.91 21 26 0.091 5.2 7.8 1.7 2 20 1098 1116 1098 1118 0.94 22 26 6.6e-06 0.00038 20.8 0.2 1 23 1144 1167 1144 1167 0.95 23 26 0.00048 0.028 14.9 0.5 1 23 1173 1195 1173 1195 0.95 24 26 0.029 1.7 9.3 0.1 1 23 1201 1223 1201 1223 0.98 25 26 0.0056 0.32 11.6 0.3 1 23 1229 1252 1229 1252 0.94 26 26 0.00044 0.025 15.1 0.9 2 23 1259 1281 1258 1281 0.95
Sequence Information
- Coding Sequence
- ATGGAGAAAACGAGCCGGCAAGTGGACATTAAAGCTTTAATCTCGCATATCGTGCGTGGAGACGGTGCAGATAGATGTCGAATATGTATGGGCGACACGGCGGAAGGCCTAGTGCATCTAGAAGACACAGTTATGTTGGACGGGGACAAGCCCGTAACCCTTGCTGAGCTACTGGAAGTCATCACAGGAGTCGAGGTGCTGTTGGACGATGGTCTGCCTCTAGGACTATGCCCCGTCTGCTCCATATCAGCATTCCAGGCGGCTGACTTCCACACCCTGTGCAAGAACGCCAACCAGCAGTGGGAAAACACAGTCCAACTCCTCAGCACCATATCCGAACCCAAGTTGGTGGGGACCACGAAGATGATAGCTATTATTGATGACAATACAATATATATAAACGAGGAACAGCCCAAGCTGCCTACACCACTAGTACGTCCAAATCCGAAAAGGCCAAAGATTCTGAATATCAAACGCAAATGCCAATGTCCATCATGTGGGAAACGTTTCACGTACCCCAAACATTTGTCCCAACATTTGAGCGAGTCGTCGGACAACCAACGCGCCTGCCACATTTGCGCTTCAATCATGACTAGAGGAGAGCTGGTGAAGCATTCATTGAACGTTCACAATATAAAGATGTACGAGTGCAAGCGATGTCCGGCTATGTTGAGTAGACGTGAACTGTACAAGTCCCATTTGGTCCAAGCGCACGCGCCCGGGGCATGCACGTGTGGCGAATGCGGCCGTACCTTCAAATCCGAGCAAGGCTACAATGCCCACTTGTCCATCCACTGCCCCAAAAACTGTCCAAGCTGCGATACCCTCTTCAGAAATCAAAAGTGCTACCGTTTCCACGTCAAAAAGTGCTGTAATCTAGACAAAACGCGATCGGACACGCACCGCACGAAGAACAAAGTAACTGTGACAGTTACAAAGAGAAATAAGAATATAAAAGTCGGCATGCGTGGCAGTGCTAACACAGAATGTATATGTGACTACTGCAACAAGACCTTCGCTGGAAAGAAGTCCGTTGCAGCACATATAAATATCGTGCACACTAAGAACACACATCGGCCTTGCGTTTACTGCGGGAAACTATTCGCCGGTGCTCACATGAGCACACATCTTAAAAAACACGAATCCAAGGTGACATACCAATGTGGGCACTGTGGGATTGTGTTAAAAACTAAATTGGGATACAGTCAGCACGTACGCTTACACACGGGCGAGAGGCCATACCGTTGTCAGTATTGCAACGAGAGTTTCATGGCTTCGTCTCGACGGTCAGCTCATATCTTGAAGACACATAGAACTTCGGAGGATATCCCAAAACACGCTTGTAGTAAATGCCCAGCGAGATTTCGACGGCCTTATAGACTTAAAAAACATATTAAAAATGTCCACGGGGAAGGATCAAACGAAAATCGGCAGTTTGAATGCAATGTCTGCCATCAAAAGTTGAGCAGTTGCCGGGGGCTGCTGAATCATAGCAGGACACACCAGGAAATTGATAAGGATCTTGTAATTAGTGAAGAATTGGTGGCGACGGAGCATCTGTTGCCCGCCGGAATGTGCCGAGCCTGTTCCGAGGCCGCCATCGCGGCTGCCAATCTCAAGAATCTGTGCGCACTGTCGTTCCAGTGCTGGGACCACGCGACAACCTACCTAACCCACATCGACGAGCCGTCAGTCGACGACAGAACCTACTACATATTTTGTAACGACGACAAAACGATCATAAAAGATCAGATCGCTAGAACACCAACAGTTCATGAGGCTTTGGAAACACTCAATTGTAAATATAAAGAGAAGCCGAATCGGCGCAAACGCATCAAACGCGACCAAGAAATACCCGGCGCTTGTCCGACGTGCGGGAAAGAGTTCTCTTCGCCGGAATATTTGAACTATCATTTGAAGAACACCTTGACCAGGGCATGCCTAGAATGCGGCCTGGTCATCCCTAAAAATAAGCTGGCGAAACACTACAACTGTGAACACGAAATGGACGTGATAGATTGCAACATCTGTCACGCCGTTTTCAATGATCAGGACTCGTTGAAACAGCATTGGACGGAGGCCCACACGACGCCTCACTCCTGCACGTACTGTGGTAACGGCTACCCGAATTCGAGAGCATTGAGAGCACATGTATACTGCCACTCGTTATTCCACTGTAAATCCTGCAATCTGAGCTTTGATAACATCAAATGCTTCAGATACCATCAGAAGCAGTGCAAAGTGGTTGAAAGACAGGTGTTTAACAACTTCATTTGCGATGATTGTGGCGCTGCCTACGATCGGAAGCCCTCACTGCGGATACATATAATCCAAAAGCATTTGAACGTGCTACCCTACGTTTGCGAGGTGTGCAGCAAGCGAACATCGACTTTGGCACACTTGAAGTCGCACGAGAAAACTCACAAGACCGAAAGGAAGATTTACCAATGTTATTGTGGTGCAAAATTGCGTACAGAGATTGGTTATCAGTTGCATCTTCGTATTCACACTGGGGAACGGCCTTATGAGTGTGAATTTTGTGGGGACAGGTTCTTGTCTTCGTCAAGAAGATTGGATCATATCAAGCGACGGCATAGAGGAGCAAAGGATATGCCACATGCTTGTGAGCAGTGTTCGGCGCGTTTTATAAAAGAAGAATCTTTGATCCCGGTCGGCGCCTGCGTCAGTTGCGCAACCACAGCGCTCGCTGCGCAAGAGTTCAGACTGTTCGTCAAAAACTCTGAAAAGGTTTGGCGGCAAGCTGTCAACAGTATCTCAGTGGTACCCTACTCCGCTGCGCCAACAACTAAATCGTTATACGCCGTCATAAAACCCACGGATTTATCGATACAAACATTCAAAGATGTAAAAAAAACCGACCCCAAGGCGATAATAGACAGGCTCAAAAACAAAGTGCCGAAGAAGATTGTCGAAAGGAAACCCCGAGGGGCTCGGACGGGTCCCGCGTGCGCGTGCCCCGACTGCGATAAAAGTTTCCTGAGTCCTTTCTACCTAAACATGCATTTACGCAACAGCGGCCACAAAGAAGCGTGTATAATCTGTGGCGACGTCCTCTTCCGAGGCAACGATATGCAGCAGCATTTGGCTACAGTGCACAAACAATATATGGCTCTCTGCAATCAATGCCCCACACTATTCATAAACCAGTCCGAGTTGAACAAGCATATCAAACGATCTCACAAAGCGGGCGCATTCATTTGTACCGACTGCGGGAGAACGTTTCCTAGGCGAGCGTCTTTCGAGTTTCACTCGCAAATGCACGCAGTCAGGACCTGCAGAACATGCGGGGCACAGTTCACGAACCGCAGCTGTTACAGGGAACACCGGGCCCAATGCGAGCCCGACGCGAAACCTAAAGCGCAAACGATACCTCGCAATCGCCGTTCCAACATCCGCGACCCCGCCACATTCACTTGCGATCAATGCGGAAAGACGTACATATCTAGAGCCCAACTTAAAAATCATATAATATGGATTCACATGGACGTGAGACCGCACCAGTGCCAATGGTGCGGGAAACGGTTCTACACGCCAGCGCGTCTAGCAGAACATACGGTCGTTCATACGCGCGCTAGGAACTTCGAATGTGACATTTGTGGTGTGAGATTGGTCTCCAAAATGGCCGTCGTGTACCATAGACGAAGGCACACAGGTGAGCGGCCTTACGAGTGTGAAGATTGCGGGGAAAAGTTCATATCTGCGTCGCGTAGGTCCGAGCACGCTAAGCGTAGGCATAATAAGGGAGTGAAATTGCCGTGTTTGAAATGTGCGGCCAGTTTTGTTAGGAAACACGAGTTGAAAAAGCACATGGAAAAGGCACACAGGACTCTGCCCGAGTCTATTACAGTGTGGTGA
- Protein Sequence
- MEKTSRQVDIKALISHIVRGDGADRCRICMGDTAEGLVHLEDTVMLDGDKPVTLAELLEVITGVEVLLDDGLPLGLCPVCSISAFQAADFHTLCKNANQQWENTVQLLSTISEPKLVGTTKMIAIIDDNTIYINEEQPKLPTPLVRPNPKRPKILNIKRKCQCPSCGKRFTYPKHLSQHLSESSDNQRACHICASIMTRGELVKHSLNVHNIKMYECKRCPAMLSRRELYKSHLVQAHAPGACTCGECGRTFKSEQGYNAHLSIHCPKNCPSCDTLFRNQKCYRFHVKKCCNLDKTRSDTHRTKNKVTVTVTKRNKNIKVGMRGSANTECICDYCNKTFAGKKSVAAHINIVHTKNTHRPCVYCGKLFAGAHMSTHLKKHESKVTYQCGHCGIVLKTKLGYSQHVRLHTGERPYRCQYCNESFMASSRRSAHILKTHRTSEDIPKHACSKCPARFRRPYRLKKHIKNVHGEGSNENRQFECNVCHQKLSSCRGLLNHSRTHQEIDKDLVISEELVATEHLLPAGMCRACSEAAIAAANLKNLCALSFQCWDHATTYLTHIDEPSVDDRTYYIFCNDDKTIIKDQIARTPTVHEALETLNCKYKEKPNRRKRIKRDQEIPGACPTCGKEFSSPEYLNYHLKNTLTRACLECGLVIPKNKLAKHYNCEHEMDVIDCNICHAVFNDQDSLKQHWTEAHTTPHSCTYCGNGYPNSRALRAHVYCHSLFHCKSCNLSFDNIKCFRYHQKQCKVVERQVFNNFICDDCGAAYDRKPSLRIHIIQKHLNVLPYVCEVCSKRTSTLAHLKSHEKTHKTERKIYQCYCGAKLRTEIGYQLHLRIHTGERPYECEFCGDRFLSSSRRLDHIKRRHRGAKDMPHACEQCSARFIKEESLIPVGACVSCATTALAAQEFRLFVKNSEKVWRQAVNSISVVPYSAAPTTKSLYAVIKPTDLSIQTFKDVKKTDPKAIIDRLKNKVPKKIVERKPRGARTGPACACPDCDKSFLSPFYLNMHLRNSGHKEACIICGDVLFRGNDMQQHLATVHKQYMALCNQCPTLFINQSELNKHIKRSHKAGAFICTDCGRTFPRRASFEFHSQMHAVRTCRTCGAQFTNRSCYREHRAQCEPDAKPKAQTIPRNRRSNIRDPATFTCDQCGKTYISRAQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRARNFECDICGVRLVSKMAVVYHRRRHTGERPYECEDCGEKFISASRRSEHAKRRHNKGVKLPCLKCAASFVRKHELKKHMEKAHRTLPESITVW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01180494;
- 90% Identity
- iTF_01180494;
- 80% Identity
- -