Pgno002017.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pheosia gnoma
Gene Symbol
-
Assembly
GCA_905404115.1
Location
FR989922.1:307627-318038[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 7.8e-14 1.6e-10 40.9 1.8 1 44 24 65 24 65 0.97
2 6 0.00041 0.84 9.7 0.0 6 44 82 118 79 118 0.88
3 6 3.3e-11 6.7e-08 32.5 3.0 1 40 157 194 157 198 0.93
4 6 2.4e-06 0.005 16.9 0.0 6 43 228 263 227 264 0.92
5 6 5.8e-08 0.00012 22.1 0.0 3 44 284 324 283 324 0.97
6 6 4.7e-05 0.097 12.8 0.0 2 44 550 588 549 588 0.92

Sequence Information

Coding Sequence
ATGATCTATCGCAAGCCAGCTGCCCTGAATGAAGATTTATATTACAGCAAACGGGCCAACAGTCAAAGGTCGCAGGCGTGGAAGTATTTCATAAAAAAACCTGGATATTTTGCCACGTGCAAATTGTGTGGAAACGATTTCTCGTACAAGGGCAGTGTGTCCAACCTGACCAAGCACTGCATCCGCAAACACAGAAACATATTTAATAAAGAGAACAATTGCAGCGATGATGATTTCGAACGATACTTCGAATTCACGGACAACGCGGACATATTGCGCTGTAAGCTCTGTTTTAAGGAAATCCCCAACGAATCTGTGGACGATATGATTAAACATATTGCTCAGGAGCATAGGAACGATGAAACGGACGCTGAGAGTGGAACTGATGCTGGTGATACGAGAGTTGTTAAAGTAGATGCTGAGAGTCGAAGTAATTCCGGGAAACCGAGCAAACAAACGAGGTATCGATCAAATGTTTGGCATTATTTCGATAGAAAACGCGACGTCATGGCTAGATGCAGGCTTTGCAATAACGATTACTCGTACAGGGCGAGTGTGAGCAACCTGAACAAGCACTGCAAGATTGTGCACGGGATAAACGTGGTTGTCGACACGAAGTACGAAATCTACGACGAGAACGACAGCTCGTTAATAAATGAGCGCAAATTTTGCTCCGAAAGATACTTTGATGTCACTGACGACGATCAGGTCGTGCGCTGTAAGCTCTGCGCCAAGGAAGTCCACCAGGATTCGGTCGCTGATCTGATAAAACACATTGTGGAGGAGCACGGCCACTTTGAAGATCCTGACACGGAAGGTGGAACTAATGCGCCCAAAACCAAATTGTTGGTGTGGTTGTACTACAAGCCGTGCGCCGACACGGAGATAGCGGAATGTCTTATCTGCAGGGCGGGTATTACCTACCAGGATAGTGTTTACAGCCTCAAGGAGCATTTGGAGACCGAACACCCGTTGGTCAAGTTCGACGGTGGCGAAAATGGCAACCGGTTGTTGATATCTGCCGATGGAGATTTATATGAAGTTGAAACTGAATCGTCGAGAAACAACCACGATGAGGAGCCAGACCAGAAGGACCCAATAGAAATGGACACAGTCTATTTAGAGGATTACGATGAATTACCAGACAGAGCAACGAGAAAACGACCATCGTTCAACAGAAAGAAACCAACGATATCATATAAAATGAAGCAAAGCGATTCCTTCAACAATTACAACGAAGATACAACAAAACGGCCGTCTTTTAAAAGAAAAAAGCGGGATTTGAATTATATAAAAAAAGAACCGTTGGACAACAGCAGTTCGGATGACGGATTGGCTGCGAATAAAAAGCTGAAAGACACACGACTGGAGCTATTCGGACAGTACATAATATCTCTCCTGATGGAACTGCCGAAGAGATTGTCGGACCAGCTACAAGGGGACATTATAAAACAGGTCATAACAGCCAAAGGGATGTACGAAGCTGAAAAACTAAATGTAACTGCTCCAGGATCAGTATCGAGTGTACTCACAGCACCGGTGACTGTTACTGAGACGGTACCTGTTACCGAATCGATACCTGTTATTATGTGTAATAGTGATGGGAGTATTAAAAATGATGGAGATGATTCATCGAAGCTCGAGGATGTGCTGTGGGGCTACTTCGAGCGCGAGGAGGAGGGGCAGGCCCGCTGCGTGGTCTGCCACGACAGCATGGGCGACAGCCGCGAGGAGCTGAACCGGCATATGGAGGAGAACCACCCTAAACTGATTGGACATGCTAGTCTGGACACCGAGCAAGCTTCAGAGGCTTCGAGCAACGCCGAAGACGATAACACCTTCACAGAAGTCATATATCTCGAACAAGACACGTTACAAGAAATCGAACCGCGCATATCCATAGACAAACCGCGTCGCACGCATGAAACACCGAAAATCAAAGCGAAATTCGCTCAAAAACCACCAAAAAAACGTCTCAGAGACAGCACTTCTTCAGACGACTACCCCACACGCAAGAAAGAGAGGCCCGATGAGAAAGAGGACGATGAACTGACAATATTTCTTAAATACATTAAATGTTTATTACAAAAATTATCAAAAGACTCGTTCAACAAAGTCCAATTGGATATTGTTAATCTTATTATGACCGCGCAAAGTAGCGGCAGTAGCAGTTACGTGGATTTGCAAAAAGGAACAGATACGAATGTTATCAGTCTTAACGATGTAACAGGTATTCAGAGCGGACACAACTACAGTATAACAGTCGCTGCGTGCACCTCCAAAATTGACGATGCTGATAATAGACAAACTTCTTAA
Protein Sequence
MIYRKPAALNEDLYYSKRANSQRSQAWKYFIKKPGYFATCKLCGNDFSYKGSVSNLTKHCIRKHRNIFNKENNCSDDDFERYFEFTDNADILRCKLCFKEIPNESVDDMIKHIAQEHRNDETDAESGTDAGDTRVVKVDAESRSNSGKPSKQTRYRSNVWHYFDRKRDVMARCRLCNNDYSYRASVSNLNKHCKIVHGINVVVDTKYEIYDENDSSLINERKFCSERYFDVTDDDQVVRCKLCAKEVHQDSVADLIKHIVEEHGHFEDPDTEGGTNAPKTKLLVWLYYKPCADTEIAECLICRAGITYQDSVYSLKEHLETEHPLVKFDGGENGNRLLISADGDLYEVETESSRNNHDEEPDQKDPIEMDTVYLEDYDELPDRATRKRPSFNRKKPTISYKMKQSDSFNNYNEDTTKRPSFKRKKRDLNYIKKEPLDNSSSDDGLAANKKLKDTRLELFGQYIISLLMELPKRLSDQLQGDIIKQVITAKGMYEAEKLNVTAPGSVSSVLTAPVTVTETVPVTESIPVIMCNSDGSIKNDGDDSSKLEDVLWGYFEREEEGQARCVVCHDSMGDSREELNRHMEENHPKLIGHASLDTEQASEASSNAEDDNTFTEVIYLEQDTLQEIEPRISIDKPRRTHETPKIKAKFAQKPPKKRLRDSTSSDDYPTRKKERPDEKEDDELTIFLKYIKCLLQKLSKDSFNKVQLDIVNLIMTAQSSGSSSYVDLQKGTDTNVISLNDVTGIQSGHNYSITVAACTSKIDDADNRQTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01180470;
90% Identity
iTF_01180470;
80% Identity
-