Pgno008938.1
Basic Information
- Insect
- Pheosia gnoma
- Gene Symbol
- JARID2
- Assembly
- GCA_905404115.1
- Location
- FR989898.1:10362355-10376681[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7 1.8e+04 -3.9 0.0 36 61 141 168 140 180 0.61 2 3 5.8e-20 1.5e-16 60.5 0.0 8 89 681 759 675 759 0.89 3 3 3 7.8e+03 -2.6 0.1 2 21 766 786 765 797 0.74
Sequence Information
- Coding Sequence
- ATGAAATCGTCACGAAAAGTGCAAGCCCAGCGCAAGTTTGCCCAGGGGGCCCACGCCCCCGCGGCTGCGACCACCAGCGGAGCCTTCCCGGAAAGGAAACCCAGGGAGCCGACCAAGGGACAACACTTGGTAAAAGTTCAAGTGCCGGCGTCAGTTTTACTCGACGTTGTTTCTTTCAAAAATGTCCATCTACATGTGCAGCCCGTAGTTTTGATAGAGCGATTAAAAACCTCCAATATAACAAATAACAATGTCATAGTCAAGAAAACTGTGAAAGTACAAAAAGTGACACCAAATACACATATAGTCAAGGAGTTCAAAAAAAAGAAACCAAATAAAAATCAGAAGTCAATGAGAGGGCCATACCCTTGGGATATGACGTTACGGTCACGCAACACAAGAAATGAAAAGAAAGTTCCGCTCACAAAGCAAGTGCGCAAACGCAGGGGCGCCCAAGAACAGATGCAGGGAAACTTCAAAAGGAGCCGCGTTATTTGTAGGGAGAATTTCACATCCGACGATAATAAGCCGCTGACTCACTTCGCCAAGGTCGCAGTCAAAAGGAATACATTGAAGAAGAACAACAAATCCTTGAAAGCCACTAAAAATGTTATGACGCGTGACAAGACCAAGGATGACTCCGGTCTAAAAACCGCTGCTCCAGGGCTACGCAAAGGCAGAAGCAAGAACGCGCAAGTCCCTGAGCTTGTAGATGCCAGCCTGCAGTCGGACAATCAAGGACTAGCGGATAAGACCTCGATCAGTGCGCCACAAACTCCGGTAACCAATGACAACTACCTTAACCTGACTACATCTAAGACGGTCGTGTTAAAATCCAAGAAGGCAGTGCTTGATCGCGACTGTGAGAGTCAAGCCGAGACAGTTCTGGACCAACTTGCGGAGCTAGTGGCAGTACCAGAACCACAACCGGGTCCGAGCGGCCTGCAGGCGCCGCCGCCGCTCGGCGCGGCAGCACCCGCCGGCGCGCCGGCCGGCCCGGACGCGCCATCCGATCTGCCCGACACGTCGGAATGCGGCCAGCTCCGCGGCTTCTCCGTGGCGGAAAACGACGCCGCCGTGCCGTACTACAACGAGCACGGCATACAGCGATGGATCAACGTGTTCCTGTCGACCCCCGACCCCGCCGCCAACAACAGGCTGGACGTTGACCTCGTCGATTGCACAACGCCGACATTAACGACAATGTGTCCGGCCACCGCGTGGTCCACTTTAAGAGAAGTGGTGAACGCCCCCCCACAGCTGCTCAGTACGCGGTGCACGGAATGCGAGGCTTGCACCAGAATTGCGAAGGTGTTCCAGTTGTCCATCCTCCTGAGGGTGCACCGCCAGATCGTGCGCAACGATGACGAGGAGCAGGGCCCCGAGCCGGCCGCGCCGCTGCCCGGCGACGACAACACCATGGTGTCCACAGACGGCGGTTTGTTCATGGAGCTACTGCCGAGTCATCCCAACTTTATGATAAAACTCAAGGCGCAGAGTGTCCATAGCAAGCAGATATTAAGCGTGCGACTCTGTCCCCGGCGCGATGCACAATTCAACAAAGAATTCCATATGATGGAGCATGAATATATTGTGGACGATCTGATCACGGCCGCTACATTAAACTCGCCGCCGCCGCAGCCGGTGGCAGGCAACTTGAATGGGCCCGAGAGCGACCCGCGGCCCGCGTCCGTCAAGGCCGATTCCGTGGTGGATCTGACCTCGAGGTGCTCCGTGCGGTCGGAAGGCAGGAGCGACGCGGGCTCGCAACCCAATTCCTTCCCAAAGAGCGTCGACAGGGCCAAACTGGTCGATGCGCCGGTCTTCTACCCCACAAAGGAGGAGTTTACTGACCCAATAGCGTATTTCGAGAAAATAGCACCTGTGGCGTCCAAGTACGGGCTGTGCAAAGTGATACCGCCTCCCTCCCACGAGTTCACGCCCAAGTGCAAGATAGACGACAACATCCGTTTCGACGTGACCAACCAGTACATATCGCGGCTGTACAACCGATGGGGGCCCGCGGCGAGGGAGCTGTGCGCTATAAAAGCGTGTCTCAAGTCGCAGTTCCTAAATCTAACGCGATCTCCTTTGCTGGACGGCATCGAGGTGAACCTGCCCAAGTTGTACCACGTGGTGCAGCGCAACGGCGGCCTGGAGAAGGTGATCGACAAGAAGCGCTGGGGCCGCGTCGCCGAGGAGATGAGCTTCACCAAGACACCCAACCCGGAGAAGAAACTGGACAATATCTACGTCAAATACCTGCTGCCATACGACACTCTTGCGCATAAAGAACGTCAAGAAATCATTCGTAAGGTCGAGAAACACTGGAACAAAAGGAACCAAAAGATGCTCGATCGGGCAATGAACCCGTTGCACCGACAGAAGCGGTTGCTGGGCGAGTCCGATTCGTCTGGCGAGGACACGGGCGACGAGAGCGAGGTGGGGAACGCGCTGGCGGAGGCCGAGGATTGCATCGTGCCGGGCTCCTGCATGAACCTGAGCAAGTTCAAGAGGGTAGCCACGATAGCGCTTGAGAACAACTTTCGTTCGAGCACGGTTCAGTCGGCGCAAGTTGTGGAAGACCTGTACTGGCGGCTGGTGCTGCTCGGCACGGAGCACGTGTGCGTCAACACCGCCTCCATCGACACCGGGGAGGAGGGCTACGGGTTCAGCAAGAACAAGCAGGACCCCTACTCCCAGCACCCGTGGAACCTGAAGATCCTGAGTCAAAACAGCAGTAATATGCTCCGCTCGCTGGGCCCGGTGCTGGGGCTCACGGTCCCCTCGCTGCATCTGTGCATGGTGTTCTCCACCAGCTGCTGGCACAGCGACCCGCACGGACTGCCTTGGATTGAGTACATGCACCAAGGCTCCACCAAGATTTGGTACGGCATACCGTACGAGCAGAGTCAGAACTTCCGTAAGGCCGTCGAGACACTTTGCCCAACGTCGTGCCAGAACAAGGCCATATGGCTGCCGTCTGACATCACTATGATCCCGCCGCCGCTGCTGCTGGAGCACAACGTGTCGCTCTCGAAGGTGGCACAGAACCCGGGCGAGTTCATAATGGTGTACCCCAAGGCTTACTCCTGCTCAATATCCACCGGATACACGCTCTCTGAGAGTGTGTACTTCGCGACACACTCGTGGCTGAACAGTGTCCATCTAGTGTTTCAAGTCCAGTTGAACGCCGCCTGTTCTCTCTTCGATAGCTGCTGGCGGCGGTTGCTCCTCGTTCTCGACACAACCACTCAACACTTACTAGGGCTCAGTGCCCGTGCCTGCGATGGCACATTAGGTTTATATTGCGGCGCGGCGGGTTTTATCGCGGATTAA
- Protein Sequence
- MKSSRKVQAQRKFAQGAHAPAAATTSGAFPERKPREPTKGQHLVKVQVPASVLLDVVSFKNVHLHVQPVVLIERLKTSNITNNNVIVKKTVKVQKVTPNTHIVKEFKKKKPNKNQKSMRGPYPWDMTLRSRNTRNEKKVPLTKQVRKRRGAQEQMQGNFKRSRVICRENFTSDDNKPLTHFAKVAVKRNTLKKNNKSLKATKNVMTRDKTKDDSGLKTAAPGLRKGRSKNAQVPELVDASLQSDNQGLADKTSISAPQTPVTNDNYLNLTTSKTVVLKSKKAVLDRDCESQAETVLDQLAELVAVPEPQPGPSGLQAPPPLGAAAPAGAPAGPDAPSDLPDTSECGQLRGFSVAENDAAVPYYNEHGIQRWINVFLSTPDPAANNRLDVDLVDCTTPTLTTMCPATAWSTLREVVNAPPQLLSTRCTECEACTRIAKVFQLSILLRVHRQIVRNDDEEQGPEPAAPLPGDDNTMVSTDGGLFMELLPSHPNFMIKLKAQSVHSKQILSVRLCPRRDAQFNKEFHMMEHEYIVDDLITAATLNSPPPQPVAGNLNGPESDPRPASVKADSVVDLTSRCSVRSEGRSDAGSQPNSFPKSVDRAKLVDAPVFYPTKEEFTDPIAYFEKIAPVASKYGLCKVIPPPSHEFTPKCKIDDNIRFDVTNQYISRLYNRWGPAARELCAIKACLKSQFLNLTRSPLLDGIEVNLPKLYHVVQRNGGLEKVIDKKRWGRVAEEMSFTKTPNPEKKLDNIYVKYLLPYDTLAHKERQEIIRKVEKHWNKRNQKMLDRAMNPLHRQKRLLGESDSSGEDTGDESEVGNALAEAEDCIVPGSCMNLSKFKRVATIALENNFRSSTVQSAQVVEDLYWRLVLLGTEHVCVNTASIDTGEEGYGFSKNKQDPYSQHPWNLKILSQNSSNMLRSLGPVLGLTVPSLHLCMVFSTSCWHSDPHGLPWIEYMHQGSTKIWYGIPYEQSQNFRKAVETLCPTSCQNKAIWLPSDITMIPPPLLLEHNVSLSKVAQNPGEFIMVYPKAYSCSISTGYTLSESVYFATHSWLNSVHLVFQVQLNAACSLFDSCWRRLLLVLDTTTQHLLGLSARACDGTLGLYCGAAGFIAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01180110;
- 90% Identity
- iTF_01180110;
- 80% Identity
- -