Basic Information

Insect: Phengaris arion
Gene Symbol: X-element\ORF2
Assembly: GCA_963565745.1
Location: OY751448.1:18184602-18202547[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.42 53 5.8 1.1 3 23 934 954 933 954 0.96

2 8 0.0002 0.025 16.2 1.3 2 23 992 1014 991 1014 0.95

3 8 0.014 1.7 10.5 0.7 1 23 1019 1042 1019 1042 0.91

4 8 0.053 6.7 8.6 0.4 2 23 1047 1069 1046 1069 0.94

5 8 0.00012 0.015 16.9 0.0 2 23 1101 1122 1100 1122 0.97

6 8 0.00018 0.022 16.4 0.3 1 23 1128 1150 1128 1150 0.99

7 8 0.06 7.6 8.4 0.1 1 23 1156 1178 1156 1178 0.98

8 8 1.7e-06 0.00021 22.8 1.7 1 23 1184 1206 1184 1206 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.42	53	5.8	1.1	3	23	934	954	933	954	0.96
2	8	0.0002	0.025	16.2	1.3	2	23	992	1014	991	1014	0.95
3	8	0.014	1.7	10.5	0.7	1	23	1019	1042	1019	1042	0.91
4	8	0.053	6.7	8.6	0.4	2	23	1047	1069	1046	1069	0.94
5	8	0.00012	0.015	16.9	0.0	2	23	1101	1122	1100	1122	0.97
6	8	0.00018	0.022	16.4	0.3	1	23	1128	1150	1128	1150	0.99
7	8	0.06	7.6	8.4	0.1	1	23	1156	1178	1156	1178	0.98
8	8	1.7e-06	0.00021	22.8	1.7	1	23	1184	1206	1184	1206	0.99

Sequence Information

Coding Sequence: ATGTGTTCTAAAATTTTGGCTAAGGGCCCCCGCTccggccccctcgtcgagcagcatgccctCGCCCCCTGCCCCCCCCCCGCGAAGGTCACCAAACGGCAGCGACAAGATGCACCATCTGACATCTCGCCACCTGCCAAGCGCGCCGATCGCCCGGCGACGTACGCAGCTGCGACTACGGCTGCTCAATCCGGATCTCCATCGGCCTCGACACCGAGGGCCGTATCGCCGATGGATACTACCACGGCAACCTCTGTGACACAAACACGGAATGTGTCTTCGCCACCGCCTCCCCCCGCCCCCCGCTGCCCGCCACTCATCGTGGAAAAGCTGGAGGACTGGGTAAGGCATTTTAGTAATCTCGCAGATCTCCTCGGCCACCCTCCCAATGCGAAGCCACTGGGACAAGGGATCAAATTCACCCCAAAAGGGGAAAAAGAATACCGTGTCGTCCAAAAATATTTGGACGACCTAAGCAAGACTGAGCGCGTAAGCTGGTTCTCTTACGCGCTCCCGCAGGACCGTGGACTTAAGGTAGGTGTCAACGGCCTCCCGGTCCATACCCCCACCGACGCCATAGCCACCGCACTCAACAAGAAGGGCTACGAGGTAGAGCACGTGTCTCGGATCCTAGCTAGGAAGGACCGCCCAGGGTGCTCGTACTTCGTGCTGCTGAAACGCACCCCGGACCTGGTCCCCGGGATCTTCCAGCTGACGGAACTCCTGAATATGCCAGGTATTAgggtggaagcctggcgtggcAAGGACGGCCCCACCCAATGCCACCgctgccagcagttccggcactcTAGCCAGAACTGCCACCGAAGGCCGGCGTGCGTCAGGTGTGGCGAAAAGCACTTCGCAACTGACTGCCCCCGCCCGCCCTCCGAACAGCCCACCTGCGTCAACTGCAAGGGGGCCCACCCGGCCAACAGTAAAAACTGCCCGATTTTTAAACGCGAGGCCCGAAACCGCCGTGCAGGCCCCACTGCCCGCACCAGGCGCGCACCTCACCGGGTAAGTCAAGACCCTCCCATAACGGAGAAAGAGGTCCCCCCTCCACCGCCTACGGCCACATCCCTTATGGCCGTGGCCAACGACCCCACCCCCCCTCCCTCATCCTCCACTCTCCCCGCCCCCTTAGTGCGGAAACAGAGGAAAAGAAAGAGGACCAAGAAAAAGGGCCCCAAGTCCGGTGCCACCTCCGCGGCAGCAACGGACTCTGAATACGAGCCCCTTGCACTTCCGCTGCCAAATGTCGAGGCTGTTTTGTCGCCCCCCCCCCTTACCTCAGcgcaccccccccccccccgcatCTCTCGTGCATCGCGCAAGGTCCCGTCGGCCACTACCACTGCCGAAGTGGCTGAGGTTGCCACCGAACCGGCCAACCCAGCAGTTGCTGCCACCACCCTGCCAGCAATTGCCGCACCGCCCTCTCAGCGCCGTTCCAGGAGGGAAGCCCCCTCGGCCCCTGAATCCACCGCTGAGTTAATTTACGCCCTCTTCTCCCTGGCTATGGATATCTTCTCAAAAATCCAGGCCGGGGAAGATATACTCAAAACTCTTCTGTCGGCCCTCCCCGAAGGGGCCTCCCTCACCTCAAAATTATTGCAAGATTACCTAGGAGGAGACCGAGTGTGTAGAGGCCTCGCTGTCTTGGTCggcaggaggctcctccaccaactcctccctaCCCCCGCGGTGTCATCCCTTTATGCGCTGGGCATCGAAGTTGCACTCGGCACCCACCGCACCCGCATATTTGCGTGCTACAAGCCCCCAAAatcacatttagatatctccgacatccacaggctcatatcagatgagccgactgtgattgccggagatctaaattgtaagcaccccgaGTGGGGCTCTCGCACGACAAATGCAGACGGAAGACGTCTGCTCGCCGACTCTGTGCAGGCTGGATATACGGTGGTGGGTACTTACACCCCCACCCATTACCCGGAGCAATCCTCGCACTCGCCAGACGTCTTAGACGTCGCCATTACCTATCGCGTCGCAGGAGACCTCCACCAGGAGGTACTGGACATGGCCCACGATtcagaccatctcccggtcCTGGCCATCGTCCGAGCATCCCCAGTAAGTGTCCCCCCCCTCCCCTCATAcgcagtccgcgactgggacgcttTCTCCCTGCAGCTGCACGAAAATACGCCAAATTTCCCGGTGAACACTGCAGAAACCGTCGAATCTATGACGGTGCAGCTCACCGGGGCGATTGTAGCTGCAATGGATGCGGCCACCCAACCGCCCACCCACCGCCAACATAAGCGGCCTCCCCTATCTCGCCACCTAATGGACCTGATCGCCGAAAAGAAGCGCCTGCGACGACGATGGCAACGCACCCGATGCCCAGCGATAAAGAcgcagctcaaccgcctcaccgcagagATACACAAGGGCGACAGCTTGCCACAACAGTTATGCGAAAATTGTACAAAAGATCTTAAATTTAGTGTCGAATTTAGAGAAAAATGTGTAACTTCCAATTCCAAATTACTCGGAGCTCAAACCTCCAATACGGATTTAAAAATTACCACCCAAGTTAAGCAAGAGGAAGTTAATGATGATTTTGAACATGAAATAAATTATATACGAACGaataataaagaagaaataGAAGCGAAGGATGAGTATATTGAGACACATCAATCTGAAGACAATTTTGAATATGAGTTTGTAACTGGACTCTGTGCAAAAAAAATAGAGAAAGATAAGTTGAGTGAACATATAAAAAGCCACGAGAACGGCAATAATTATTGTGGACTGTGCTCTCTCCACTTCAAGGAGTGGGAGACAATGTTGCAGCACCGCATTTCTCATTTGAACAAACCAAACCTGATCTGCCACATTTGTTTGCGCAGTCATCCGACTCAACTCTCCTTGGAATGCCATCACAATATCAAACATTTGGGTAAGATTGAAGACGCTATAAAGTGTATGCAGTGCAATAGAAGATTCTTCTCCTCCAGTAATCTGTACAAGCACGTGCGAGCAATACACACCGTGAAAACGTTCGAATGTAAACAATGTTCTAAAGTTTTTCCTACTGCTCGTATTCTTAAAAATCACGAATTCAAAATTCATGAGAAGAAGAAAAAATGTGGCGAATGTGAGTTCACGACGGAATCTCTGAGCGCCCTGCGGCAACACCGTCTCCAGGCTCACGCGGCCGGCAGCGTGGCCTGTGACCTGTGCGAGACGCTGTTCGCGAGTGAAAACAGACTCAAGCAGCACAGCTGCCGCCGGAGCACGTCCACTGTGTGCCCGGTCTGTGGCATCATGTTCCCATCCACGGATAAgCTGCGAGAGCATCAAGCGACGCACTCGGAGGAGCGCCGCTACAAGTGCTCGCGCTGCGACGCCGCGTACCGCTCGTGGCGCGCCCTGCGCATACACGTCAACAAGCACGACGGCGTCCGCGCCTACAAGTGCGAGTTCTGTCCTGCCGCGTTCTGGGGGCGACCCACGCTCGTCAAACACCGCCGGGTGCACACCGGTGAAAGGCCGTATGTATGCAAGTTGTGTAATAAAGGTTTCACCGCCAATCATAACCTCAAAGTCCATATGCGAGTGCATGGTGTATTCGATCTCATAAAGAAAAAAACGTCAGCCGACGAGGATTCTGTCGACAATGAGTACGGAATACCGTCAACCCCGGGAGATGAATCTGTCAGAGAATCAAGGACTAGTATGAACTCCTCCAAAGTAAAGGAAGCCTCAAATTCATTATTTGGAGTAGCAGGAGATGATGGAAGATTAAGGCACTCTTCAAAAGAAGgGGGGTTTCTAATTATAGTGGGAATAGAGGAAAACTGTAGTGTTAAAAGGATAGGAAAGTGGTCACTACCATATGAATTTGGAAGAATGGACCAGGAAATTCGGGAAGAAAGGGAGGGGGAGCAAATGGATAAATCTACAACAGATTTAGGATTCTGGGATGGAGTCACTCTTCGAGTCGGATTCCCGTTGTTTAAAATAACCAGATTTAAATCATCTACGAAATCAAAGAAGATATTAGACAATGAATCAGAATGA
Protein Sequence: MCSKILAKGPRSGPLVEQHALAPCPPPAKVTKRQRQDAPSDISPPAKRADRPATYAAATTAAQSGSPSASTPRAVSPMDTTTATSVTQTRNVSSPPPPPAPRCPPLIVEKLEDWVRHFSNLADLLGHPPNAKPLGQGIKFTPKGEKEYRVVQKYLDDLSKTERVSWFSYALPQDRGLKVGVNGLPVHTPTDAIATALNKKGYEVEHVSRILARKDRPGCSYFVLLKRTPDLVPGIFQLTELLNMPGIRVEAWRGKDGPTQCHRCQQFRHSSQNCHRRPACVRCGEKHFATDCPRPPSEQPTCVNCKGAHPANSKNCPIFKREARNRRAGPTARTRRAPHRVSQDPPITEKEVPPPPPTATSLMAVANDPTPPPSSSTLPAPLVRKQRKRKRTKKKGPKSGATSAAATDSEYEPLALPLPNVEAVLSPPPLTSAHPPPPRISRASRKVPSATTTAEVAEVATEPANPAVAATTLPAIAAPPSQRRSRREAPSAPESTAELIYALFSLAMDIFSKIQAGEDILKTLLSALPEGASLTSKLLQDYLGGDRVCRGLAVLVGRRLLHQLLPTPAVSSLYALGIEVALGTHRTRIFACYKPPKSHLDISDIHRLISDEPTVIAGDLNCKHPEWGSRTTNADGRRLLADSVQAGYTVVGTYTPTHYPEQSSHSPDVLDVAITYRVAGDLHQEVLDMAHDSDHLPVLAIVRASPVSVPPLPSYAVRDWDAFSLQLHENTPNFPVNTAETVESMTVQLTGAIVAAMDAATQPPTHRQHKRPPLSRHLMDLIAEKKRLRRRWQRTRCPAIKTQLNRLTAEIHKGDSLPQQLCENCTKDLKFSVEFREKCVTSNSKLLGAQTSNTDLKITTQVKQEEVNDDFEHEINYIRTNNKEEIEAKDEYIETHQSEDNFEYEFVTGLCAKKIEKDKLSEHIKSHENGNNYCGLCSLHFKEWETMLQHRISHLNKPNLICHICLRSHPTQLSLECHHNIKHLGKIEDAIKCMQCNRRFFSSSNLYKHVRAIHTVKTFECKQCSKVFPTARILKNHEFKIHEKKKKCGECEFTTESLSALRQHRLQAHAAGSVACDLCETLFASENRLKQHSCRRSTSTVCPVCGIMFPSTDKLREHQATHSEERRYKCSRCDAAYRSWRALRIHVNKHDGVRAYKCEFCPAAFWGRPTLVKHRRVHTGERPYVCKLCNKGFTANHNLKVHMRVHGVFDLIKKKTSADEDSVDNEYGIPSTPGDESVRESRTSMNSSKVKEASNSLFGVAGDDGRLRHSSKEGGFLIIVGIEENCSVKRIGKWSLPYEFGRMDQEIREEREGEQMDKSTTDLGFWDGVTLRVGFPLFKITRFKSSTKSKKILDNESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -