Basic Information

Insect: Phengaris arion
Gene Symbol: salm
Assembly: GCA_963565745.1
Location: OY751448.1:17532973-17540317[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.12 15 7.5 0.8 1 15 355 369 355 377 0.84

2 10 0.00017 0.021 16.5 3.2 1 23 384 407 384 407 0.96

3 10 0.02 2.5 10.0 2.0 1 23 438 461 438 461 0.97

4 10 0.0042 0.53 12.1 0.3 1 23 465 488 465 488 0.93

5 10 0.17 22 7.0 0.1 2 20 501 519 501 521 0.93

6 10 1.2 1.6e+02 4.3 0.1 2 23 574 596 573 596 0.95

7 10 0.0033 0.41 12.4 2.5 2 23 612 633 611 633 0.96

8 10 4.4e-07 5.5e-05 24.6 0.4 1 23 639 661 639 661 0.99

9 10 0.23 30 6.6 6.8 1 23 668 691 668 691 0.98

10 10 0.00044 0.055 15.2 0.2 1 23 697 720 697 720 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.12	15	7.5	0.8	1	15	355	369	355	377	0.84
2	10	0.00017	0.021	16.5	3.2	1	23	384	407	384	407	0.96
3	10	0.02	2.5	10.0	2.0	1	23	438	461	438	461	0.97
4	10	0.0042	0.53	12.1	0.3	1	23	465	488	465	488	0.93
5	10	0.17	22	7.0	0.1	2	20	501	519	501	521	0.93
6	10	1.2	1.6e+02	4.3	0.1	2	23	574	596	573	596	0.95
7	10	0.0033	0.41	12.4	2.5	2	23	612	633	611	633	0.96
8	10	4.4e-07	5.5e-05	24.6	0.4	1	23	639	661	639	661	0.99
9	10	0.23	30	6.6	6.8	1	23	668	691	668	691	0.98
10	10	0.00044	0.055	15.2	0.2	1	23	697	720	697	720	0.91

Sequence Information

Coding Sequence: aTGAGTTGTTGTATATTGACCTGTGTGAACAGTGAAACATCTAGTGCACCTTATGAAGATGTTACCTTTtacaaAATACCTAAAGAGTATCACTTGAAACAGTTATGGACAGAAGCTATTGGCATACCTGAGTGGCAGCTTAGACCCAACAGTGAGGTATGCTCACTTCATTTCCAAGAGCTTGACATCACAATCTCAGAGACGGGAGAAAAGATACTTATGGAAGGAGCTGTCCCAAACATGTGTCTTAACACTCCTGATGACCTACAAGCAGTAGCTGATTTCAGAACATGCAGAGTGTGCCTGGGCATGGATAGGAAAATGTACCATATCAGGGATTACAATCTCTATCATGCATACGAGATGATTGTTGGACTGatgGTTGAGACTGTGGACCGATTGCCCAAAATGTTGTGTTGGGAGTGTACCAGCAAGTTAATatctatgaaaatatttaaagagaAAGCACTCAGGACACATTTACTTCTGTCTGAAAGATTAGccttaaaaaatATACTAACAGTTAGTGATATAAAGTCTATAAAccgtataaattataatttaaattcacACCTGACACTCAGACACAACGAGCCAAATGAATTTGACGTGCACATTGATCATGACCAAATGGACATACTGCAGGAGATTAAGATTGAGTTCAGCAAGATGAACGAGGAGCCGGACAATCATGGGATAGAGGATGCGGACTTCAAGCTAGAAGACAGTGATGTGAAGGACGAGGTGAACCACAGTTTCAGTGATAGTGATGACATTGAGCTCAGTGAATTAAGGACTAAAAAGGTCAGGAAACGCAAGGGTAAAGTGAAAAAAGAAGCAACAGAAGTGAAGAGAAAAAAGCGGGTAAAGAAAGAGGAAGTGAAGGTAAAGGAGCAGGAGGATGAGGATGTTATGGAAAAATTCCAGCGGCCCACAGTGAAGCGACGCGTGCGCAGCTACGACATCAGCGACAGTCACTTTGACACGCGGCGGCTGACGCTGGAGGAACAGCTGGCGGAGTTGCAGGCGCGGGCCCGCTCCGCCGCCTACCTCGCCGCGCCGTACAAGTGTGATGTGTGTTACAAGGGCTTCAAGTCGGCTGATACCCACGGCCTCCATGTGGTACGACATAGCGAGaaGTACGGCGAGTTCGAGTGCTTCATCTGCAAGCGGCGGTTCAAGAACGCGCGGCACCTGCGGCTGCACGTCTCCAGCCTGCACACCGAGCAGTTCAGCTGCAAAGCCTGCGACTTCGTCACGCGCTGCCGaggCATAGCGATAGACCATCAGAAATGGCATTCGGGCAACACATACGCGTGTCCGCACTGTCCTTCCAAATTTGGCAAGTTCACATCGTACATGTCCCACCTGCGCATCAAGCACTCGTCGCGGTTCGCGTGCGAGCTGTGCGGCTACACGTTCGTCAGCAAGCGCGGCGTCGAGATGCACAAGGCCAAGCGACACAAGCTGCAGGACGTTCAGATGAAGCTGGACGGGCCGTACTGCGAGGAGTGCCAGCTGCGGTTCGCCAACGACGAGGCCTACCTGCGGCACCTCACGCAGTCCTCCGTGCACAGCAGCGACAATGATCCGAACCGGATCCGCAACGACTGGGGCTGCAAGGAGCAGCTGGGCGTGGTGCGGCGCACGCGCAAGCGGCGCGCGCCCGGCGTCGTCACGCACTGGGCCGAGCACCCCGACCGGCCCAAACAGAACATCCCCTGCGAGCAGTGCAGCGAGCAGCTGGACAGCTACCGGTCGTACGCGCAGCACTTCCGCATGGCGCACCCCGGCCTCAACCGCACCAAGTTCTCGCGCGTCGCCGGCGCCTGCATGTGCGAGCAGTGCGGCAAGATGTTCGCGtgCAAGGCGCTCCTGCTGGACCATATGATGTCGCATTCGGGCGAGAAGCGATTCAAGTGCGAAGCGTGTGACAAGGCGTTTACCAATAAGAACAACCTGGCAGTGCACCAGCGCGTGCACGGCGCGCAGGTGCCGACGTACCGCTGCCCCTACTGCGAGCGCCAGTTCCACTTCTACCAGAACTGCAACCGCCACGTGAAAACGGTGCACAAGGGCGTAAAGCAGTTCCAGTGCGAGATCTGCGGCAAGGACTTCACGTCGGCGGCCGGCCAGCGCGCGCACGTCGACCACGTGCACCACAAGAAGCCGCGGCCCAAGCGCGTGCGCGCGCGCGCTCCGCCCGCCGCCTACCGCGACTAG
Protein Sequence: MSCCILTCVNSETSSAPYEDVTFYKIPKEYHLKQLWTEAIGIPEWQLRPNSEVCSLHFQELDITISETGEKILMEGAVPNMCLNTPDDLQAVADFRTCRVCLGMDRKMYHIRDYNLYHAYEMIVGLMVETVDRLPKMLCWECTSKLISMKIFKEKALRTHLLLSERLALKNILTVSDIKSINRINYNLNSHLTLRHNEPNEFDVHIDHDQMDILQEIKIEFSKMNEEPDNHGIEDADFKLEDSDVKDEVNHSFSDSDDIELSELRTKKVRKRKGKVKKEATEVKRKKRVKKEEVKVKEQEDEDVMEKFQRPTVKRRVRSYDISDSHFDTRRLTLEEQLAELQARARSAAYLAAPYKCDVCYKGFKSADTHGLHVVRHSEKYGEFECFICKRRFKNARHLRLHVSSLHTEQFSCKACDFVTRCRGIAIDHQKWHSGNTYACPHCPSKFGKFTSYMSHLRIKHSSRFACELCGYTFVSKRGVEMHKAKRHKLQDVQMKLDGPYCEECQLRFANDEAYLRHLTQSSVHSSDNDPNRIRNDWGCKEQLGVVRRTRKRRAPGVVTHWAEHPDRPKQNIPCEQCSEQLDSYRSYAQHFRMAHPGLNRTKFSRVAGACMCEQCGKMFACKALLLDHMMSHSGEKRFKCEACDKAFTNKNNLAVHQRVHGAQVPTYRCPYCERQFHFYQNCNRHVKTVHKGVKQFQCEICGKDFTSAAGQRAHVDHVHHKKPRPKRVRARAPPAAYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00745139;
90% Identity: iTF_00288928;
80% Identity: iTF_01178681;