Basic Information

Insect: Phengaris arion
Gene Symbol: -
Assembly: GCA_963565745.1
Location: OY751448.1:15456267-15470786[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0031 0.39 12.5 1.4 1 23 250 272 250 272 0.98

2 12 1.2 1.5e+02 4.3 0.0 1 23 279 302 279 302 0.88

3 12 1.5 1.9e+02 4.0 2.2 1 23 466 488 466 488 0.94

4 12 0.0011 0.14 13.9 0.2 1 23 493 516 493 516 0.96

5 12 0.011 1.3 10.8 0.3 1 23 520 543 520 543 0.96

6 12 0.0047 0.59 11.9 0.1 1 21 551 571 551 572 0.95

7 12 0.0019 0.23 13.2 0.2 2 23 584 605 583 605 0.96

8 12 0.002 0.25 13.1 0.3 1 23 608 631 608 631 0.95

9 12 0.00016 0.02 16.5 1.7 2 23 650 671 650 671 0.97

10 12 1.8e-06 0.00023 22.7 0.7 1 23 677 699 677 699 0.99

11 12 3.2e-05 0.004 18.7 1.0 1 23 705 727 705 727 0.94

12 12 2.3e-05 0.0029 19.2 3.1 1 23 733 756 733 756 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0031	0.39	12.5	1.4	1	23	250	272	250	272	0.98
2	12	1.2	1.5e+02	4.3	0.0	1	23	279	302	279	302	0.88
3	12	1.5	1.9e+02	4.0	2.2	1	23	466	488	466	488	0.94
4	12	0.0011	0.14	13.9	0.2	1	23	493	516	493	516	0.96
5	12	0.011	1.3	10.8	0.3	1	23	520	543	520	543	0.96
6	12	0.0047	0.59	11.9	0.1	1	21	551	571	551	572	0.95
7	12	0.0019	0.23	13.2	0.2	2	23	584	605	583	605	0.96
8	12	0.002	0.25	13.1	0.3	1	23	608	631	608	631	0.95
9	12	0.00016	0.02	16.5	1.7	2	23	650	671	650	671	0.97
10	12	1.8e-06	0.00023	22.7	0.7	1	23	677	699	677	699	0.99
11	12	3.2e-05	0.004	18.7	1.0	1	23	705	727	705	727	0.94
12	12	2.3e-05	0.0029	19.2	3.1	1	23	733	756	733	756	0.98

Sequence Information

Coding Sequence: ATGTTGGCTTGTCGAGTATGTTTGACTAGCAATAACGTGAGACTGTACGATGTGAACGCCATGTACAATCTAAAAACGGCGTACGAAACAATGACTGGATATCAGataTCAATAGAAGATGGTTTGCCACAAAAGATATGCAACTACTGCAGTACGATGTTACTTAAATGCATATCATTTAGAGAAAAATGTTGTTATACTCTAGAAGTAATGAAATATCTTATTAGAAATCAGAAAGAGATCACAAAGGAAGATGTATTATCAATACAATTACATAAACAATTCGTAGGCCTCTCACAAACCGGCATATTACCCGTCATAGACATAGAGTATACAGAGCCAGTACCTATCAAGGAAGAGTTTGATTTAGACCTTGAGAGCATAGTCAAAATAGAAAATGGAATACAAGAGAAAAGACATAAAAAGACCACACTAGGAAAAGTGAAGAAACGAAAAAAGAAtcttacaaaaaagaaaaaattaaaagatgaGGAATGTAATATGGAATTGGAGCTAGCTGGTATAGAaatggatgatgatgatgataagaaTATCGGAACCTGTGAAGttgacaattttgtttttcctGACATGGAATTTGAAAGTGATGGAGATCAGGACAATCAAATTGAAATGGATGAGAGCATAGACGACCTGAAGGAGGCCAAACTAGTGATGCTGAGTAGAGAGGAGCAGCTGGAAGAGATGGAGGCTCGCAAGAGCTCGGCCAACTACACCAAGTCCAAATACAAGTGCAACAAATGCTACCGAGGGTTCATATCGGAGGTCACATATAGTAATCACTTGGAGAGACACGATCCAAAGAGCGGCGACCACGAGTGCGGTGTGTGTGGCGTGCGGTGGGCGGAGGCGCGGCTGCTGCGTGCGCACATGGGCGCCGCGCACGAGCGCAAGTTTCTCTGCACTCTGTGCGACCACGTGTCGCGCTCCAGGTGGGTGCGGTGTTTGTGTGTGTGCGGCGTGCGATGGGCGGAGGCGCGGCTGCTGCGTGCGCACATGGGCGCCGCGCACGAGCGCACATGGGCGCCGCGCACGAGCGCAAGTTTCTCTGCACTCTGTGCGACCACGTGTCGCGCTCCAGGTGGGTGcggtgtttgtgtgtgtgtgcagCAAAAGACCGCGGTGACTTCAAGTGAGGTGTGTGCGGCGTGCGATGGGCGGAGGCGCGGCTGCTGCGTGCGCACATGGGCGCCGCGCACGAGCGCACATGGGCGCCGCGCACGAGCGCACATGGGCGCCGCGCACGAGCGCAAGTTTCTCTGCACTCTGTGCGACCACGTGTCGCGCTCCAGGTGGGTGcggtGTGTGTGCGGCGTGCGATGGGCGGTGGCGCGGCTGCTGCGTGCGCACATGGGCGCCGCGCACGAGCGCAAGTTTCTCTGCACTCTGTGCGACCACGTGTCGCGCTCCAGctATCGAGCTAAGGAGCACTATAAATGGCACACAGGTTATAAGTTCGACTGCAAAATATGTGGAGCAACGTTTGGCAAGTCGACGTCGGCGCTGACGCACATGCGGCTGGCGCACCCGTCGCGGCACTCGTGCGAGGTGTGCGGGGAGTCCTTTATCGGAGACCTGGGGCTGCGGATGCACAAACGGCGCGCGCACCGTTTCCTAacggacagcacGTACCAATGTGTCCACTGTCAAGTGCGGTTCAAGGGCGAGGAGGCGCTGGCCAAACATCTGGAGACGGCCGCCAACGGGCTCTGTGACGCTAGCCTGATACCGTGTCATCAGTGCGGAGAGGGGTACGCTTCGGACGAACTCCTCAAAACCCACCTAAAGGAACACCAATCCTTCACTTGTGATGAGTGTTCCCGCACATTCAACTCTGCGCGCTCGTACGGCGTGCACGTGGAGCGCGTGCACCTCGGCGTGCgcgcgcgcccgcgccgcgccacGCGCCGTGCGCCCGACACCGCCGTGTGTGAGGTCTGCGGGAAGAAGTGCATTacgATGGCGACACTGCGCTACCACCAGCGAACACATACCGGCGAGAAACCGTACCAGTGCCCCGACTGCCCCAAGCGCTTCTCTGTCTACCAGCGGCTGCAGATCCACCTGCGCACGCACACGGGCGAGTCCCCGTACAAGTGCGCGCTCTGCCCCAAGGCGTTCAAGCACAAGGCCGCGCTCAACAGGCACGACCGGGTCCACACGGGGGCGAAGCCCTACAGCTGCACGCACTGCGGCAAGTCCTTTTCGCAGTCCAACTCGCGTAAGTTGCATGTGAACACGGTGCACCTCAAGATGCCCGCGCCATACCGCAACCGGAAGACCACGTAG
Protein Sequence: MLACRVCLTSNNVRLYDVNAMYNLKTAYETMTGYQISIEDGLPQKICNYCSTMLLKCISFREKCCYTLEVMKYLIRNQKEITKEDVLSIQLHKQFVGLSQTGILPVIDIEYTEPVPIKEEFDLDLESIVKIENGIQEKRHKKTTLGKVKKRKKNLTKKKKLKDEECNMELELAGIEMDDDDDKNIGTCEVDNFVFPDMEFESDGDQDNQIEMDESIDDLKEAKLVMLSREEQLEEMEARKSSANYTKSKYKCNKCYRGFISEVTYSNHLERHDPKSGDHECGVCGVRWAEARLLRAHMGAAHERKFLCTLCDHVSRSRWVRCLCVCGVRWAEARLLRAHMGAAHERTWAPRTSASFSALCATTCRAPGGCGVCVCVQQKTAVTSSEVCAACDGRRRGCCVRTWAPRTSAHGRRARAHMGAAHERKFLCTLCDHVSRSRWVRCVCGVRWAVARLLRAHMGAAHERKFLCTLCDHVSRSSYRAKEHYKWHTGYKFDCKICGATFGKSTSALTHMRLAHPSRHSCEVCGESFIGDLGLRMHKRRAHRFLTDSTYQCVHCQVRFKGEEALAKHLETAANGLCDASLIPCHQCGEGYASDELLKTHLKEHQSFTCDECSRTFNSARSYGVHVERVHLGVRARPRRATRRAPDTAVCEVCGKKCITMATLRYHQRTHTGEKPYQCPDCPKRFSVYQRLQIHLRTHTGESPYKCALCPKAFKHKAALNRHDRVHTGAKPYSCTHCGKSFSQSNSRKLHVNTVHLKMPAPYRNRKTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -