Basic Information

Insect: Phengaris arion
Gene Symbol: -
Assembly: GCA_963565745.1
Location: OY751451.1:9612389-9621588[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8e-05 0.01 17.5 0.1 3 23 47 67 46 67 0.97

2 17 4.2e-06 0.00052 21.5 1.2 1 23 73 95 73 95 0.99

3 17 4.5e-06 0.00057 21.4 2.7 1 23 101 123 101 123 0.99

4 17 2.3e-06 0.00029 22.3 3.4 1 23 138 160 138 160 0.98

5 17 4.1e-05 0.0052 18.4 3.1 1 23 175 197 175 197 0.98

6 17 5.1e-07 6.4e-05 24.4 1.5 1 23 212 234 212 234 0.99

7 17 0.00013 0.016 16.8 2.8 1 23 240 262 240 262 0.98

8 17 2.9e-05 0.0037 18.8 1.6 1 23 268 290 268 290 0.98

9 17 0.029 3.6 9.4 1.8 1 23 297 319 297 319 0.98

10 17 4.8e-07 6.1e-05 24.5 2.3 1 23 325 347 325 347 0.99

11 17 0.034 4.2 9.2 1.8 1 23 354 376 354 376 0.98

12 17 2e-06 0.00025 22.5 1.5 1 23 382 404 382 404 0.99

13 17 8.7e-05 0.011 17.4 0.8 1 23 411 433 411 433 0.99

14 17 2.2e-06 0.00027 22.4 1.9 1 23 439 461 439 461 0.98

15 17 0.0016 0.2 13.4 0.3 1 20 467 486 467 489 0.93

16 17 2.2e-05 0.0028 19.2 1.3 2 23 496 517 495 517 0.97

17 17 2.8e-06 0.00035 22.0 1.4 1 23 523 546 523 546 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8e-05	0.01	17.5	0.1	3	23	47	67	46	67	0.97
2	17	4.2e-06	0.00052	21.5	1.2	1	23	73	95	73	95	0.99
3	17	4.5e-06	0.00057	21.4	2.7	1	23	101	123	101	123	0.99
4	17	2.3e-06	0.00029	22.3	3.4	1	23	138	160	138	160	0.98
5	17	4.1e-05	0.0052	18.4	3.1	1	23	175	197	175	197	0.98
6	17	5.1e-07	6.4e-05	24.4	1.5	1	23	212	234	212	234	0.99
7	17	0.00013	0.016	16.8	2.8	1	23	240	262	240	262	0.98
8	17	2.9e-05	0.0037	18.8	1.6	1	23	268	290	268	290	0.98
9	17	0.029	3.6	9.4	1.8	1	23	297	319	297	319	0.98
10	17	4.8e-07	6.1e-05	24.5	2.3	1	23	325	347	325	347	0.99
11	17	0.034	4.2	9.2	1.8	1	23	354	376	354	376	0.98
12	17	2e-06	0.00025	22.5	1.5	1	23	382	404	382	404	0.99
13	17	8.7e-05	0.011	17.4	0.8	1	23	411	433	411	433	0.99
14	17	2.2e-06	0.00027	22.4	1.9	1	23	439	461	439	461	0.98
15	17	0.0016	0.2	13.4	0.3	1	20	467	486	467	489	0.93
16	17	2.2e-05	0.0028	19.2	1.3	2	23	496	517	495	517	0.97
17	17	2.8e-06	0.00035	22.0	1.4	1	23	523	546	523	546	0.97

Sequence Information

Coding Sequence: ATGGAGGATGAAGGAGTTGAAATGGACATGGATGGCAGACAATGTTCACAGGGAATGGGTGTTGACATGGGTTCGATCCAAACAAAAATGGAAGTAACAAATGGTCCCCAATCAATTCCACGGTCAAAGCCTCAAGCTTgtaagGTGTGTGGCAAGGTGCTATCGTCGGCCTCCTCGTATTACGTCCACATGAAGTTACACTCCGGGAACAAGCCGTTTCAATGCACAGTATGCGACGCAGCGTTCTGCCGCAAGCCGTACCTGGACGTGCACATGCGCACGCACACCGGCGAGCGGCCGTTCCAGTGCGACCTCTGCCTCAAGCGGTTCACGCAGAAGTCCAGTCTCAACACGCACAAACGCGTCCACACCGATGAGCACATGCGCGCGTTGATGGTGAAGGATCGACCGCACAAGTGCGAGCTCTGTGGGATGCGCTTCACGCAGAGCTCCAGCCTCAACagacacaagaaaatacacacGGAGGAGCACAGACGCGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGTCACGGAAAGATACACACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCATATCAATGTGACGTCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTTGGCACCCATAAACGTATACACACCGGCGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGGCGAGCGGCCCTATGAGTGCGACGCGTGTCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAGTATACATAAGCGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGTCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATACACACGCGCACGCACACCGGCGAGCGACCCTATCAGTGCGACATCTGCCTGAAGCGCTTCACGCAGAAGTCATCGCTCAACATACACAAACGGACGCACTCAGTGCAGGGCCGGCCCTTCCAGTGCCTGCAGTGCCCCGCCGCCTTCACCTGCAAGCAGTACCTCGAAATCCACAACCGCACGCACACCGGCGAGCGCCCATACCAGTGCGACGTCTGTCTCAAGAGATTCGCGCAAAAGTCCACTCTCAACATACACAAACGAACGCACACAGTGCAAGGTCGGCCGTATCAATGCACGGAGTGTCCTGCGGCGTTCACGTGCAAGCCGTACCTGGAGATACACATGCGCACGCACACCGGCGAGCGGCCCTTCGAGTGCGATGTCTGTTACAAACGCTTCACCCAGAAATCTACGCTCAACATCCACAAGCGAATACATACCGGAGAACGTCCGTATGCCTGTGATATCTGTCAGAAAAGATTTGCTGTGAAAAGCTACGTGACCGCGCACAGATGGTCGCACGTGGCGGACAAGCCGCTGAGCTGCGAGCGCTGCTCCATGACGTTCACGTCCAAGAGCCAGTTCGCGCTGCACATCCGCACGCACGCCACCGGGCCCTGCTACGAGTGCAGCGTGTGCGGCCGCACCTTCGTGCGAGACAGCTACCTCATACGGCACCACAACCGCGTGCACCGCGAGAACCATAGCAACGTCTCGGCAAATAGCATCAGCACCATCAACAGCGTCGCCACCAACACCTCCAACTACGACTCGCCCGGCGTCTGCGACCTGAGTTTTGTGCCAATGGTGAACCGCTACATGACGTCGCAGGGCACGCAGGTGTCCATGGACACGAGCAAGATGTCCGCCATGTCGCCACAGTCCATCGTCTCTATTTCGTCACCCCCTCCCCCGCACACGCCGACGCCGCAGCCGCCGATGTCGGGACAGATGCGTCTCTCAGATTGA
Protein Sequence: MEDEGVEMDMDGRQCSQGMGVDMGSIQTKMEVTNGPQSIPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLDVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKDRPHKCELCGMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDVCDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTGERPYECDACLKRFTQKSSLSIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCTECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLSCERCSMTFTSKSQFALHIRTHATGPCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSISTINSVATNTSNYDSPGVCDLSFVPMVNRYMTSQGTQVSMDTSKMSAMSPQSIVSISSPPPPHTPTPQPPMSGQMRLSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00824939;
90% Identity: iTF_01151388;
80% Identity: -