Pari017270.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751438.1:8419225-8421756[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-07 7.3e-05 23.6 0.0 3 36 17 51 16 60 0.84
Sequence Information
- Coding Sequence
- ATGGTCAATAATTATAAGCGGAAAACCAATAGAGCAGCCTATCCAAAAGAAACTCTTCAAGCTGCAGTTAGTTCAGTCAGAAATGGTTTTTTAAGTGGCTACCAGGCTGCAAAAGAATTCAAAATTCCCAGAATGACAATAATGGACCATGTCCATAACAAGCGGATTACATCCAAATCATTAGGAAGATCCACAGCATTACCATTTGAGGTTGAAAAAAGATTAGCTTCATGTTTACATTTCATGGAAAGACATGGATTTGGTTTAAGCAAATCAGAAATATTACAAATCGTAGAACGGTTCGTGAAGGACAACAAAATACAAACATCATTTAAAGATGGTAAACCAGGTAACGCTTGGTTTAATGGATTCAAAAAACGGCACCACCTTACTATAAAAAAACCACAAGCCGTTGAATACACAAGAAAAAAGGCTATGAATCCATTCATCGTATACCCATATTACGACTTACTTGAAAAGACattaaaaaacttgaatttaTTGGAAAAACCATCAGCAATATGGAACATAGATGAGACTAGTTTTTCTAAGGATCcctcaaaaacaaaaattgttggATTAAAAGGACATGCAGCGACCAGAGTCATATCTTCAACTGGAAAAGAAAATACAACCGTTTTGTTAGGGGGAAATGCGTGCGGAGATAAACTGCCTCCGTTATTAATCTACAAAGGAAAACACATGTGGGACACGTGGATGTCCCCTGAAGCTTACCCTAACACAACTTATGCGGCAACTAGAAACGGGTGGATGGAAAGCGATGTCTTCGAAAGgtactttaaaaaatcatttttacccGCAATTGGTGATGAGCGTCCCGTATTGTTAATTTACGATGGTCATGCCACCCATGTTGGCATAAATGTCATTGAAGCAGCTCGTGAAGCCAATGTAACTGTATTAAAACTACCAGCACATACAAGTCACGTCTTGCAGCCCTTAGACGTGGCAGTTATGAAACCCTTCAAGGATCGTTGGGACCAATTACTTGTACAATGGCAGCGATTAAATGTCGGGACAGCATTGTCAAAAAAAGAGTTTTCGAGGCTTATTGGGTTAGTTTGGGCACAAATCGACCCTCAAATTTTAAGGAGTGGTTTCCGCAAAGCAGGAATTTTCCCATTCAATCCAAAGATGGTTGAAGAGAACTTTGACTCATTAAAGCTAGAACACTGGAAAGATCAACAAAAAAAGTGTCAAAACAATCCTAATGAAGTTCAAAATCCAGATGTTCAAAATATAGAATTTATTTCTGATAGTATAGATACACGACACACCACTCTAACAACTTCTTCGAAAAATCCTAAATCTTTGCTCTCGTTAGCGCTTGAAATTGTTACTAATCTGACTAGCATACAAACTCATGGGAGACTAGAAGACCTACGTCCTCGACATAACTTTATGAAACGGTTACACAATCATAAAGTTACAAATACTGAAAACAGTGAAAATGAAACTGGTTCTGTAGAAAATGAATATCGTTCAAGTAACGTCAAAAAGATCCAAATATTAGATGACAGAATTATTACCTTCGAAGAACTTCTTTTGATGACAATTAAAGCTGGAAGTAACATCAAAATGAAAAGACAGAAAATGGGACCGGGTGCTGAAGTTATAACCCATGATGATGTACTTAAGCGCAAGATGgaagaaaatattatcaaaaatataaaaaaggaaccAAAACAGTTTAGGAGCAAAATACAAAAAGACCAGCACATTATAGAACCTGTGCCTGGACCCTCAGGTGTAACTAAAAATACACTATCAGATGAAGAAAAGACAATCAGAAATTATAAGAAAGTACAAAATGAAATgataaaaaaagaacaaaaacatCCAAAGGGTAAGGGTATTGGTAAAAAGAGTCGGAcagttgaaaaacaaaaaacatcaacaaattctttaaagaaaAAACGCTTAAGAGTGACTTCGGAAGACTCGACAAGTGTGTCAGATTGCATAAGTATTTACAGTGATTTTGATACATGTAGCGACGATGATTTACTTACAGAAATATCTAAAATTAACACACAAAGACAACTTCAAGAAACTATAGAAATTTATGAAAGCGAAAAAGACAATAGAGACAAAGAAGATAGAGACCTATACAGCAGAAAACAAGAGTATAAAGAACTAATTGACATCGAACAAGAAAGTAGAGAACACGAAATAATAGATGAATATGACGTTATTTTCAATGAAAAGGAAGTCGCCGAGTATGCTGCCAATGACAATGTACTCGTCCGAtacttttatagaaaaaaatggaCATACTATATAGGCTATGTAGAAGGACAAAAAACTGTTGACGATGATGAAGTATATTACTCAATAAGATTTTACAAGACTGTTAAAAACCCTTTAAGTTTtatgttaacaaaaaaaatagatcGTGACGATGTGCCTTACATatctattgtaaaaaaaaaatccctgaTACAAGATCTGAGTAatccaaaaaaatttttattaggTAACGATAATGATACAGTCTATTTTAGTGTTTAA
- Protein Sequence
- MVNNYKRKTNRAAYPKETLQAAVSSVRNGFLSGYQAAKEFKIPRMTIMDHVHNKRITSKSLGRSTALPFEVEKRLASCLHFMERHGFGLSKSEILQIVERFVKDNKIQTSFKDGKPGNAWFNGFKKRHHLTIKKPQAVEYTRKKAMNPFIVYPYYDLLEKTLKNLNLLEKPSAIWNIDETSFSKDPSKTKIVGLKGHAATRVISSTGKENTTVLLGGNACGDKLPPLLIYKGKHMWDTWMSPEAYPNTTYAATRNGWMESDVFERYFKKSFLPAIGDERPVLLIYDGHATHVGINVIEAAREANVTVLKLPAHTSHVLQPLDVAVMKPFKDRWDQLLVQWQRLNVGTALSKKEFSRLIGLVWAQIDPQILRSGFRKAGIFPFNPKMVEENFDSLKLEHWKDQQKKCQNNPNEVQNPDVQNIEFISDSIDTRHTTLTTSSKNPKSLLSLALEIVTNLTSIQTHGRLEDLRPRHNFMKRLHNHKVTNTENSENETGSVENEYRSSNVKKIQILDDRIITFEELLLMTIKAGSNIKMKRQKMGPGAEVITHDDVLKRKMEENIIKNIKKEPKQFRSKIQKDQHIIEPVPGPSGVTKNTLSDEEKTIRNYKKVQNEMIKKEQKHPKGKGIGKKSRTVEKQKTSTNSLKKKRLRVTSEDSTSVSDCISIYSDFDTCSDDDLLTEISKINTQRQLQETIEIYESEKDNRDKEDRDLYSRKQEYKELIDIEQESREHEIIDEYDVIFNEKEVAEYAANDNVLVRYFYRKKWTYYIGYVEGQKTVDDDEVYYSIRFYKTVKNPLSFMLTKKIDRDDVPYISIVKKKSLIQDLSNPKKFLLGNDNDTVYFSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178489; iTF_01178490; iTF_01178491; iTF_01178492; iTF_01178495; iTF_01178484; iTF_01178485;
- 90% Identity
- iTF_01178489; iTF_01178490; iTF_01178491; iTF_01178492; iTF_01178495;
- 80% Identity
- -