Pari027367.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751444.1:7694725-7695159[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-07 3.1e-05 24.8 0.0 2 36 9 43 8 48 0.88
Sequence Information
- Coding Sequence
- ATGGCTCCTAAAAAAGATTATACGCCTCAACAAATGGGCTGGGCTATTGAAGCAGTAAAAAAAGGGTTGAAAATATCCGAAGCAGCCAAAAAGTTTAATGTACCTAGGATAACCTTACACAACAAAGTTACTGGTAAAAGTCCGATCGAATGCTCAATGGGACCCAGCACCATTTTAAGTAAGGAAGAGGAAAACATTTTAGAAATCTGGATCAAAGAAATGTTAGATAAACATATCCCCGTCACAAAAGAGGAATTATTGGACAGCGTCCAACGTATAATAGTCGACAAAAACCAAGAAACTCCTTTCAAAGATAACAGACCTGGCAAAAAATGGTATACATCATTTCTTAAAAGACATCCTACGATTGCTGAACGTGTATCTCAAAATTTATGTACAACAAGAGATAATGTTACCCAAAAAGACATAGAGTAA
- Protein Sequence
- MAPKKDYTPQQMGWAIEAVKKGLKISEAAKKFNVPRITLHNKVTGKSPIECSMGPSTILSKEEENILEIWIKEMLDKHIPVTKEELLDSVQRIIVDKNQETPFKDNRPGKKWYTSFLKRHPTIAERVSQNLCTTRDNVTQKDIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158891; iTF_00038710;
- 90% Identity
- iTF_01158891;
- 80% Identity
- -