Pari037427.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751452.1:3528565-3528975[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-08 9.8e-06 26.4 0.1 5 38 19 52 17 56 0.89
Sequence Information
- Coding Sequence
- atGGTTAACAAATATAAACGAAAAACGTCGCAGGCATCATGGCAAGTCTCAAGTATGCAACAGGCTATACGGGAAGTGCAAGAATTAGGGAAATCTGTAAAAAGCATAGCAACTAAATATGGGATCCCAAGAACGACACTGCAACGTCATCTTAAAATGGGTTCGAGTGAAATAAAACTTGGGAGATTTACTACTGTCTTTTCCTCGGATCAAGAAACTGAGCTTTTGGAATACGTCTTCCACATGGATGCTTTGTTTTACGGGCTGTCAAAACAAGAGTTCTTAGAACTTGTTTACAGTTATGctgaaatgaataaaatttcGCACCCTTTTAAAAATGGAGCAGCTGGTGTAGACTGGTACAAAGGTTTTGTAAAACGTAAAGTTAGGTCCAGACCTAACTTTACATAA
- Protein Sequence
- MVNKYKRKTSQASWQVSSMQQAIREVQELGKSVKSIATKYGIPRTTLQRHLKMGSSEIKLGRFTTVFSSDQETELLEYVFHMDALFYGLSKQEFLELVYSYAEMNKISHPFKNGAAGVDWYKGFVKRKVRSRPNFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01248043;
- 90% Identity
- iTF_01248043; iTF_01178461;
- 80% Identity
- -