Basic Information

Insect: Phengaris arion
Gene Symbol: -
Assembly: GCA_963565745.1
Location: OY751435.1:4645041-4647893[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4e-09 8.3e-07 29.9 0.0 2 40 15 53 14 57 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4e-09	8.3e-07	29.9	0.0	2	40	15	53	14	57	0.93

Sequence Information

Coding Sequence: ATGGTTCGGCACTACAAGCGTAAACGCGAAACTCCTTATTCAAGGGACAATCTATTAAAAGCAGTAGAAGCTGTGAAATGTAAGAGAATGAGCAGTTATCAGGCTGCAGAACATTTTGGTGTTCCCAGAGCCACGATTTACGCGCATGTAACTGGAACGCGTGGATTAAATAAACCTGGCAGATCTACGGTGTTTGATAATGATACGGAACTGAGAATTGTGAACTGTATTCACGTAATGGAAAAGTGTGGTTTTCCTTTGACTCGCAAGGAAGTCATATTATTGATAAGCGAATATATTAGAAGGAACGGCATCGTGACGGTATTTAAAAATGACATACCTGGTGATGACTGGTTTCGAAGTTTTCGGAAAAGACACAACCTTTCTCTCAAAAAGCCTCAATCGGTGGAAATAGCCAGAAGAAAAGCGTGCAACCCCTTCACGGTAtacgaatattttgaaatactcgAAAAAGCTATTCGTGATTTGGATTTATCGTCCGCACCCGATCGTATTTACAATCTTGATGAAACTAGTTTCTGTCAGGATCCATCGAAAAGTAAAGTTGTTGGAAAAGTTGGTCATCGTTGTACAAGAACAACCAGCTCACCAGGTAGAACCAATACCTCCGTCCTTCTTGCAGCAAATGCAAATGGTGATAAAATTCCGCCTCTCATTATTTTCCAAGGAAAATATTTGTGGAACGAGTGGTTATATCAGAATGAAAATGTCAAAACAGCATATGCTGTTAGTAAAAAAGGCTGGATGGAGACCAGtatctttgaaaaatatttaaaagatgtTTTTGTCCCTGCGATCGGGAGCAAGAGGCCAGTTCTTCTAATATACGATGGACATTCGACTCACACAGATTTGAGCGTAATTGAGTATGCAATATCTGAAGGCATCACAATCCTTAAACTGCCACCCCATTCTTCTGACGTATTGCAGCCTTTAGATTGCAGCGTCATGAAGCCCATGAAGGACAGGTGGGACCAGGAACTTATAAAATGGCAAAGAATGCATGTTGGCTTCAAATTGCCCAAAAGTGAATTTGCTAGAATTCTTACTGGCATTTGGGAGAATTTAAATCCAGTAATTATTTCAAATGGATTTAAAAAGACTGGCATATATCCGGTTAATCGAAATATGATTGGAAAAGAAAAATTTGATTCCCTATCATGGCAAAAGTGGGAGAACCATATGCAATCGAAGTATGAAACTATATGCGCTGAAAATATTTCTGCAAACGATGATGATACTatggaatataataatttcgAATCAATGACAAAAGACCTGGAAAATTCCGTAAttaacacaataaaaaaaattccgaGTCTTGGAAATTTTGCACTTAGAATTTTCAACCAAAGTATAGCTCAGAGCCCGAATGAAAACTTTGACAATTCTAACAAAATGGGAGAAAATTCTAGTGGTATAGACAACAACTTATCAATAAATGGAATAGAAAATGAACAAGAGAAACAACTACTAGATAACCAAAAAACTATTGCTAATCAAGAGAtgcttatatatgaaaaaaaagaaaataaaagagaaaagaaggAAAACTATTCTGTCGTGCAAATTAAAAGCGAAAAAAATATAGCCAGAACAGTCAAAAATCCTAAAATGAcgataaaaaagcttgaaaataaGCAAAAAGGTACTAATGACAAGAATGATGGACCATCtgaatggaaaaaaataaatcctagaACATTTAGACTTCCTTTGAAGATTCAAAATAACAATAGTAACAGTGGTAAGATCAATGTTTTAAGCTGCGAAATAATAAATCCAACACATGACAAAAAAGAACAAAACTATGATGAGGTTAGTACAACATTTgaacaaatggttttaagccataTTTCGAAAAACGATTTGCCAAGAAGGCCAAAAAAACGGGTTGGTGCTGAAATATTAACATATCCTGAAGTTGTAGCACGCATGAAAAATGAAAGAGAAGAGCAAAAgacattgaaaataatgaaagaaaAGAAGAAGCAAGAAGGTTTGGAGAAGAAACTCAAACTGAAGGAAcagaaaagaaataaagaaacgaaaataaacaaaaataaaaagaagcaaaagaaaactaaattaaagaaaaatagtaAATGGTCTTCTGACAGTGAGGATACTGGGTCTTATATGTCAATGGACTCTTCAGAAACTGAAAACATGGAcacattttttgaaaatattttaaaaggtgaAGAGCAGCTACATGAAGATCCGGATGAATTCGATGAAAACATGGCTAAACCAAGACAAGGGAAAGAACCAAGGAAAATAAGCGAAGAAAAGAAAAACCCGGAAGAgcaggaaaagaaaaaaaaagaaaaggtaaCCAAAACTAAATGTTTGAATCTGAAACAAGTTCCTGAAAGTAAGGATAATTTGGAAGGCTTAAACTCAAATCTAACAAAACAGTTGAACACATTTATGGGAAATACTTTGAATGAAGAAGAGTTTTACGAGAATGAGTATacatataatgaaaaaaatgaaagtCCAAAGCCAGAGACAAGCAAAttagatacaaaaaataatataaaacatgaaATTCCGGAAGAAGGATCATTTGTGTTAGCAAAATTTGCATCTTATAAAGGTAAACgagaatataaatatgtatgcaTGATTGAAGAAATAGCTTGTGACAAAATGGTGGTTCAAGGATTTAAATCGGTCAaaaacagtaaaagtaaatttcgtgCAGTCGAGAATGATGTATCTATTATAGATCATGATGACGTTATCGAGTGTTTGCCAGCACCAAAATTTGATGACAAGGATATGGTGTACGTCTTTCCTAAAAATGTAAACATAGCagaaaagtaa
Protein Sequence: MVRHYKRKRETPYSRDNLLKAVEAVKCKRMSSYQAAEHFGVPRATIYAHVTGTRGLNKPGRSTVFDNDTELRIVNCIHVMEKCGFPLTRKEVILLISEYIRRNGIVTVFKNDIPGDDWFRSFRKRHNLSLKKPQSVEIARRKACNPFTVYEYFEILEKAIRDLDLSSAPDRIYNLDETSFCQDPSKSKVVGKVGHRCTRTTSSPGRTNTSVLLAANANGDKIPPLIIFQGKYLWNEWLYQNENVKTAYAVSKKGWMETSIFEKYLKDVFVPAIGSKRPVLLIYDGHSTHTDLSVIEYAISEGITILKLPPHSSDVLQPLDCSVMKPMKDRWDQELIKWQRMHVGFKLPKSEFARILTGIWENLNPVIISNGFKKTGIYPVNRNMIGKEKFDSLSWQKWENHMQSKYETICAENISANDDDTMEYNNFESMTKDLENSVINTIKKIPSLGNFALRIFNQSIAQSPNENFDNSNKMGENSSGIDNNLSINGIENEQEKQLLDNQKTIANQEMLIYEKKENKREKKENYSVVQIKSEKNIARTVKNPKMTIKKLENKQKGTNDKNDGPSEWKKINPRTFRLPLKIQNNNSNSGKINVLSCEIINPTHDKKEQNYDEVSTTFEQMVLSHISKNDLPRRPKKRVGAEILTYPEVVARMKNEREEQKTLKIMKEKKKQEGLEKKLKLKEQKRNKETKINKNKKKQKKTKLKKNSKWSSDSEDTGSYMSMDSSETENMDTFFENILKGEEQLHEDPDEFDENMAKPRQGKEPRKISEEKKNPEEQEKKKKEKVTKTKCLNLKQVPESKDNLEGLNSNLTKQLNTFMGNTLNEEEFYENEYTYNEKNESPKPETSKLDTKNNIKHEIPEEGSFVLAKFASYKGKREYKYVCMIEEIACDKMVVQGFKSVKNSKSKFRAVENDVSIIDHDDVIECLPAPKFDDKDMVYVFPKNVNIAEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01178444;
90% Identity: iTF_01178444;
80% Identity: iTF_01178435;