Pari026878.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751444.1:4363506-4364414[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-09 3e-07 31.3 0.0 1 35 14 48 14 56 0.91
Sequence Information
- Coding Sequence
- ATGGCCCGTACCTACGTCCGTAAGAAAGTTAAACCATACACGCCAGAAGACTTAGCCGAGgcgttacaaaaaataaaaaatggagaaCTTACCATAACCACTGCAGCAGAACAATACTCCATTCCAAAAGCGACTCTAAGTGAAAATATGCATTCTAAGTATTCCAGGCCAACTGCAGGTAGACCTACAATCTTTTCATTGGAAGAAGAAGAACGTTTAGCAGATGCcataaaaataatggaaaaatgGGGATTTGGATTGTCAAgacaagaaattttaaaaattgtcgcTGAATACGTAACGGCaaataagattaaaacgccatttaaaaataacacgcCCGGTCCAGATTGGTTCATCAACTTCCGCAAACGTCACCGCCTCTCTATAAAGAAAGCACAGCCCGTGGAATATGTACGCAAAAAAATGAcggatccatttttcattttcGAGTACTTCGACTTGCTAGAAAAGACTTTGATAGAGTTGGATCTTATTGACAAACCTCAAAACGTCTGGAATCTAGATGAAACGTCTCTGTGTCTGGACCCTACTAGAACAAAAGTAGTGGGAGCCATCAATAAACCCTGTGCAAGAACCACTTACGGTTCTGGCAAGGAAAATATAACAGTATTGGCAGGTGCAAATGCTGCAGGCAAGAAATTACCACCTTTAATTGTCTTTAAAGGAAAATATGTTTGGGATCAGTGGATGGCTGCAACAGATGATTACGACTTCGAGTTATCGTATGCTGCAAGTCCTAAGGGGTGGATGCAGACCGACATTTTCTATAACTACATAAAAACGATTCTCATTCCAAGTGTAGGTCAGGAGAGACCAGTCTTGTTAGTGTATGATGGCCACTCTACCCATGTCGATGTAAAATATAGCAGTTTTCAAATCCTTTAA
- Protein Sequence
- MARTYVRKKVKPYTPEDLAEALQKIKNGELTITTAAEQYSIPKATLSENMHSKYSRPTAGRPTIFSLEEEERLADAIKIMEKWGFGLSRQEILKIVAEYVTANKIKTPFKNNTPGPDWFINFRKRHRLSIKKAQPVEYVRKKMTDPFFIFEYFDLLEKTLIELDLIDKPQNVWNLDETSLCLDPTRTKVVGAINKPCARTTYGSGKENITVLAGANAAGKKLPPLIVFKGKYVWDQWMAATDDYDFELSYAASPKGWMQTDIFYNYIKTILIPSVGQERPVLLVYDGHSTHVDVKYSSFQIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786691; iTF_01248039; iTF_00408401;
- 90% Identity
- iTF_00786691;
- 80% Identity
- -