Pari024849.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- clz9
- Assembly
- GCA_963565745.1
- Location
- OY751443.1:3610346-3612388[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-10 8.1e-08 33.1 0.0 1 39 25 63 25 68 0.91
Sequence Information
- Coding Sequence
- ATGGTGCGAACATATCAAAGAAAGTATACCAACTCACGCAATGGCAAAACTCATCCACCATATCTGCGGTATTCTGAAGAAGATTTAAACAAAGCAATAGAAGCCGTTCAGAATCGTAATTTGAAAGTTAAAGAAGCTGCcgaaaagtacaatattccgaTGAGCACTTTAAGCAGaaaatatagatataaaaaTTGCACACAAGAGAAAGCGGGGCACCCAACCCTATTCTCGAAGGAAGAAGAGAAGTCGTTTGTAGAATATATTCAGCTATTGAGCCACTGGGGTTTTCCTTTAGATTCAACTGACTTACGAGTTTTtgctcaaaaatatttaaataaaattggaaaAACCATATATGGACTAAAAGATAACATGCCTGGTGTAGACTGGGCGCGCAATTTCCTAAACAGACATAAACGTGTGATTTCCAATCGGACAGCGTCAAACATATCTTGTGATCGCGCCAGAACTACAGATCAGGAGATAGATGACTTTTTTTATCGTTACGAAAAATCTATCGAAGGAGTCTCCCCGGACTGTCTCATCAATTATGATGAGACAAACCTAACTGATGACCCgggtaacaaaaaatacattttcaagAGAGGATGTAAATACCCTGAAAGGGTTATAAATAGTTCTAAGTCATCAATTTCTTTAATGTTTGCTGGCACTGCGGATGGACAATCTTTACCGATATATGTAGTGTACAAAGCGGATCATTTGTGGGATCAATGGCTGGAGGGAGGACCAAAAGGAACCAGATACAATAGATCCAAAAGTGGCTGGTTTGATTCGGTATGTTTTGAAGACTGGTTTCATACGGTAATAGTTCCGTACGCAAAAAAGAAACCGGGACGAAAAGTTGTAATTGGAGATAACTTGTCTTCTCATTTCTCACAATCTGTTCTACAGACTTGCAATGAACTAAACATAACGTTTATTTGCTTACCTCCAAAAGCTACACATCTACTCCAGCCATTGGATGTAGCTTTTTACGCTCCTTTAAAAAGATATTGGCGTGACGTGTTAACAAAGTGGAAGAAGACAGAAGGATTGAAACACAAGACTCTAGTAAAAAGTTCTTTTCCAAAGTTATTAAAGAAATTGAAGAATAAATTAGTAGAGAATGGTACGGAATCCATTAATTTGATTGCCGGATTTAACAAATGTGGCTTATACCCTATAAATTCAGAGCGACCCAAGTCACGGTTGCCACAAAGACAGATAATTTCGGAAGAAGAGATAGATAACACAGCATCTTCGGTTGTAATAGACATTTTGCAAGAAATGAGAAGTCCTACAAGTGCCACCGGACAAACAAAACGAAAAAGGAAATGCAACGTACCACCCGGAATGAGTATTACAGCAGACGATCTAGTACGCAATCAGACAGAAAAAACCAAACCCCTCCAGCAACAAAAACGGAAAAGTACACAAAAGCAAGTGTCGGGCAAAAAGGAGAGTAAAACATCTTTAGCTTTAACCAATTCCGATTTATCTGACAAAGATATGAGTAACTCCGATTCTGATATCACTGGAGGATTTAAAAATGAAGAATCGAATTTTCTTGATACGCAGCCAATTGCTGGTCCTTCCGGGCTATGTAATGCCCATGCCTTTGATTCTGGTTCCACAGACGTCAGCTCAGACGATCAAAGATCACAGTATGAAAAGATTatagaaaatagtaaaaaactagCAACTGGAGAATGTGTATCTATTAAAGGCAagggtaaagaaaaaaaaagtaaccaaAAACTAGAAAAAAGGCAGATGAAGATAAGTGATATGAAAAAGAAACCAGCATCTGGTGCAAATCTATCTATTAAAGGCAAGGGCAAGGGAAAGAAAAGTAAACCAAAAATAGAGAAAAGGCAGATGAAGATCAGTGATTTGAAAAACTTAGACTTAGACCCAGAAAGTATTAGACTATTGATAGCCAGTATTAAAGCCgagaaatcaaaaaaaaaagaaaaccaaaAGAAAGTCAAAAGATTCCGACACTACAAGTGTGTCAGATGTCATGAGTGTCCATAG
- Protein Sequence
- MVRTYQRKYTNSRNGKTHPPYLRYSEEDLNKAIEAVQNRNLKVKEAAEKYNIPMSTLSRKYRYKNCTQEKAGHPTLFSKEEEKSFVEYIQLLSHWGFPLDSTDLRVFAQKYLNKIGKTIYGLKDNMPGVDWARNFLNRHKRVISNRTASNISCDRARTTDQEIDDFFYRYEKSIEGVSPDCLINYDETNLTDDPGNKKYIFKRGCKYPERVINSSKSSISLMFAGTADGQSLPIYVVYKADHLWDQWLEGGPKGTRYNRSKSGWFDSVCFEDWFHTVIVPYAKKKPGRKVVIGDNLSSHFSQSVLQTCNELNITFICLPPKATHLLQPLDVAFYAPLKRYWRDVLTKWKKTEGLKHKTLVKSSFPKLLKKLKNKLVENGTESINLIAGFNKCGLYPINSERPKSRLPQRQIISEEEIDNTASSVVIDILQEMRSPTSATGQTKRKRKCNVPPGMSITADDLVRNQTEKTKPLQQQKRKSTQKQVSGKKESKTSLALTNSDLSDKDMSNSDSDITGGFKNEESNFLDTQPIAGPSGLCNAHAFDSGSTDVSSDDQRSQYEKIIENSKKLATGECVSIKGKGKEKKSNQKLEKRQMKISDMKKKPASGANLSIKGKGKGKKSKPKIEKRQMKISDLKNLDLDPESIRLLIASIKAEKSKKKENQKKVKRFRHYKCVRCHECP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178383; iTF_01525880; iTF_01439834;
- 90% Identity
- iTF_01178392;
- 80% Identity
- -