Pari026656.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751444.1:2627856-2629250[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-12 1.8e-09 38.4 0.0 2 37 12 46 11 52 0.91
Sequence Information
- Coding Sequence
- ATGTCTCTTTCAAGACCCATATTACAATACCccgaagaaaaattaatccaagcTTTAGATGCTATCAGAAATGGGATGACAATCAGGGAAGCTAGTAGAACTCATGGCGTTCCTCGAGGCACACTTCAAGATAGACTTCATCTTCGAGTTCCTGAGGGTCCTAGAAGAATGGGTCCCGAATCCATCCTCAACAAATATGAAGAAGCCGAAATTGCGACCTGGCTTAAAGATCTAGCAATTTGCGGGTTTCCCCAAAAACCAGATAACCTACTGAACACTGTTCAACAAATGATGATCGAAGATGGCAGGCCGAATCCTTTCATAAATGGAAGACCAGGAAAGAAATGGATGGGTTCTTTTTTCAAACGGAACGAATCAATTTCTATGAGAACACCCGAAGCAATTTCAAAGGGAAGAGCAGTAATCACCGAAGAGAGTATTAGAAAATGGTTTGAGAAACTTAAAGACTATCTCACTCAAAATCAAGCACTCGGTGTATTAGAAGACcctaaaagaattttaaatggTGATGAAACAAGTTTCATGCTTTGCCCTAAAACAGGAAAGGTAATAGCACCCCGAGGGTATAAAAATGTGTACCAAAtagtaaaaggaaaagaaaaaGAGGCAGTCACTGTTTTAGCATTTTTTTCCGCAATGGGTGATATTTTACCCCCATGTGTAGTTTTCCCGTACATCAGACCACCCAAAGATGTGGTAAATAGCATGCCAGACGATTGGTTTCTTGGTAAATCTGACACAGGTTGGATGAAAGCGGATATTTTCTATGACTATATAGCTAAATGCCTAACCAAATGGATCGAAGACAATGAAGTGAAGAAGCCGGTGCTTGTTTTCGTCGACGGTCACAAAACTCACATGACGATGAAACTCAGTCAATTTTGTCATGACAATAACATTATCTTGTACGCACTTCCACCTAATGCAACACATCTGATGCAACCAGCTGATGTAAGCGTTTTTAAACCACTAAAATCTGAATGGGCGACTACTGTCCATAACTGGTGTTCACAGCCTGAAAACGCTAATACTGTACTGACAAAATCTACGTTCTGCCCATTGCTTAATAAAGTATTAAGTAAAGAATCTCTAAAAGAGTCGATCAAAAATGGTTTTCGTAAGTGTGGCCTCTATCCGTTTGATCCAAGTGCTGTAGATTACTCTAAATGCGTGCAAAATATCTTAGAGAACAGAAAGAATAATATACCTGCTGCTAAGAAAATACCATCAAAGTCATCGAAGAAAAACAATTTTGTGTTTTACTCTTTTCACCCGATACATCGCCTACATAAAAGTTATAAAGACACCACACATAgcataaactttttttttattggatacAAATCTCAAGGAAATTTTACACACCTAGAGTGA
- Protein Sequence
- MSLSRPILQYPEEKLIQALDAIRNGMTIREASRTHGVPRGTLQDRLHLRVPEGPRRMGPESILNKYEEAEIATWLKDLAICGFPQKPDNLLNTVQQMMIEDGRPNPFINGRPGKKWMGSFFKRNESISMRTPEAISKGRAVITEESIRKWFEKLKDYLTQNQALGVLEDPKRILNGDETSFMLCPKTGKVIAPRGYKNVYQIVKGKEKEAVTVLAFFSAMGDILPPCVVFPYIRPPKDVVNSMPDDWFLGKSDTGWMKADIFYDYIAKCLTKWIEDNEVKKPVLVFVDGHKTHMTMKLSQFCHDNNIILYALPPNATHLMQPADVSVFKPLKSEWATTVHNWCSQPENANTVLTKSTFCPLLNKVLSKESLKESIKNGFRKCGLYPFDPSAVDYSKCVQNILENRKNNIPAAKKIPSKSSKKNNFVFYSFHPIHRLHKSYKDTTHSINFFFIGYKSQGNFTHLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178347; iTF_01178341; iTF_01178342; iTF_01178343; iTF_01178344; iTF_01125395; iTF_00744540; iTF_00825566; iTF_00677494;
- 90% Identity
- iTF_01178347;
- 80% Identity
- -