Pari036830.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- lov
- Assembly
- GCA_963565745.1
- Location
- OY751451.1:13647986-13650062[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-18 1.9e-15 57.5 0.0 1 44 59 102 59 103 0.96
Sequence Information
- Coding Sequence
- ATGGATACCCCCCTCGGCCTGTTCCCCCCTGGCATGGACCACAAGATGTACCCGCTCATGGACGTGGATCACCGCGCGCCGCCGCTCGACGCGCAACTCTTCACGAATGTCAAAAAGAAATGGCGACCGAAAGGGCAGCACAGTGCGCCTCGCGGAGGCCCGCCTCGATCCTGGACCAACGCAGAGCTGACTGAGGCCCTGCAGCATGTCTGGAACAAGAAGATGACCACGAGTCAAGCCTCAAGGATATTCGGCATCCCCTACAACTCTCTCCTCATGTACGTCCGAGGAAAGTACGGGAAGAGCCTCAAACTAGAGCAGCTGAGGAAAGACTGCATCGGCGGACCTCTCGAGGTCCTGAATCTGAATTCgggcaacaacaacaacaaccaccCCAGCAAACACGACAAGGACGAGCACCAGAACTCGGGCCAGCGACCGTCGAGTTCGGAGCCAGATATCACCTCCAACCCCATGTTCAATCCCTTCCAGCAGGGTTTCTACCCCGAGTTCCCCCCGGGGTTCCCCATGCCCCTCAACATGCTCCATCTGCTACCCCACGACAAAACAAGGGAGTTGTACCAGTCCATCCCCATGGCTCTGGACTCACTGTCAGGGGTGACAAAGGAGGAGGATTGCAAGAGCGACAGGTCCAAGGAGAACTCCGCAGACGAGGAGGGAGACTCGTACCGCACGCCGGCGCTACCCCCGCACCCCCCCGACAACCGCACGCTGCTGCACCACAACGGCCAGGAGTAA
- Protein Sequence
- MDTPLGLFPPGMDHKMYPLMDVDHRAPPLDAQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLEVLNLNSGNNNNNHPSKHDKDEHQNSGQRPSSSEPDITSNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPHDKTRELYQSIPMALDSLSGVTKEEDCKSDRSKENSADEEGDSYRTPALPPHPPDNRTLLHHNGQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00771022;
- 90% Identity
- iTF_00934657; iTF_01248010; iTF_00933651; iTF_01217414; iTF_00403690; iTF_00405842; iTF_00164247; iTF_00687815; iTF_00261767; iTF_00744529; iTF_00925650; iTF_00786683; iTF_01141591; iTF_01141592; iTF_01143035;
- 80% Identity
- -