Pari001295.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751431.1:18278343-18288120[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4e-09 8.3e-07 29.8 0.0 2 39 132 170 131 174 0.90 2 4 4.6e-11 9.7e-09 36.0 0.1 1 39 185 223 185 226 0.94 3 4 6.6e-14 1.4e-11 45.1 0.3 2 45 241 284 240 284 0.96 4 4 0.19 39 5.3 0.1 2 13 292 303 291 309 0.89
Sequence Information
- Coding Sequence
- ATGTGGTACCACGCGGAGTCTAATCTGCAAACCGACAACAATCCATCATCACATTTGCTGCATCAGTTACACGGTACCCTGGAGGAGCTAGCACCGGCACCAGCCGGGCCCGCCGCGACTCCGGTAGAGGAGCACCCGCCGTCGCCGACGGAGGCATCGTTGGCGACCCTCCAGCCAGCACCCGTAGGGAATACGATGggTACTTCAATAATCGACATGCACGTGAAAATGATGAATGTGAAGGAAGTAGCTGACTCCGCAGACTTTGTTCCACTGATGGCGGTCAAAGAGGAGCTGAATTCTGAAGGTGAGCAACAACAGAGCAGTGACGACACGAGTGACTCCGCCCCGGAACAGTCTGCCGTCGGTCGCGGGAGCCCCAAGGCATGGTCCCCGCAGGACATGGACAGTGCGCTTGAAGCGCTGCGGACGCACAACATGACTTTGACAAAGGCATCAGCTACGTTTGGTATTCCGTCCACCACACTCTGGCAGAGGGCGCACAGACTTGGCATAGATACGCCCAAGAAAGATGGCGCATCTAAATCCTGGAGCGAGGAAGATTTGAAAGGGGCACTGCAAGCCCTTCGAGCGGGGAGTATATCTGCTAATAAAGCTAGCAAAGCTTATGGCATCCCCAGCAGCACTCTATACAAGATAGCGCGGCGCGAGGGCATCCGTCTTGCTGCGCCGTTCAACGCTGCACCCACGGCGTGGCGCCGCGCGGACCTGGCGCGCGCGCTCGCCGCTGTGCGCGCCGGCGCCGCCGTGCAACGTGCCGCCTCGCATTACGGCATCCCCACCGGAACTTTATATGGAAGGTGTAAGCGAGAGGGCATAGAGCTGTCCCGCTCTAACCCCACGCCGTGGTCAGAAGGAGCTATGGAGGAGGCACTTGAAGCGGTCAGGGTACATTTGGCATCAATAGAGCTGGCAACAACAACACACGTGGGTCCTTTCGGCCTCGTGGCGTTACACAGAGTAGACACAACAGACAATAGTCTGCGGCAGCAAATAAGAGACGTGGTTCCCAAGACCCTCAATCAGCGAATAGGCGAAGGCGTTTCTGACTATTTCGAGGCGCGCCAATTGGAGACTTCTAGGAGCACCGCCCATCTCCTAAAGGTAATCAGAGGGTTCCGCACACCCTTTCAAGCCAGACTTCCTCTTGTACTTCCCACAAATCACGGACCCTTAACGACCCCAGAGATAGAAGCCATGTCCGAGAGCATATCTCAAATGATTCGGCAAGGTATGCTGGAGAAGGCACCTCATTCTCCGAGTTTCATCTCCACTATGTTCTTTGGTTAA
- Protein Sequence
- MWYHAESNLQTDNNPSSHLLHQLHGTLEELAPAPAGPAATPVEEHPPSPTEASLATLQPAPVGNTMGTSIIDMHVKMMNVKEVADSADFVPLMAVKEELNSEGEQQQSSDDTSDSAPEQSAVGRGSPKAWSPQDMDSALEALRTHNMTLTKASATFGIPSTTLWQRAHRLGIDTPKKDGASKSWSEEDLKGALQALRAGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLARALAAVRAGAAVQRAASHYGIPTGTLYGRCKREGIELSRSNPTPWSEGAMEEALEAVRVHLASIELATTTHVGPFGLVALHRVDTTDNSLRQQIRDVVPKTLNQRIGEGVSDYFEARQLETSRSTAHLLKVIRGFRTPFQARLPLVLPTNHGPLTTPEIEAMSESISQMIRQGMLEKAPHSPSFISTMFFG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -