Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_963565745.1
Location
OY751435.1:6594384-6615553[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-30 1.5e-26 93.9 0.1 1 89 279 365 279 365 0.96

Sequence Information

Coding Sequence
ATGCAGGGCGATGACCCCCCATTTCTTCCAGTTGGCACTGAAGTCAGTGCCAAATATAAAGGTGCATTTTGTGAGGCAAAGATAAAAAAAGTTGTTCGCAATATAAAATGCAAGGTCACCTTGAAAGCTGGTGGTATTACAACTGTTAATGATGATGTCATTAAGGGAACATTACGAGTTGGTAATACGGTTGAGGTCAGGCAGGATCCAAAAAAGGATGCTATGGAGGCagtaattacaaaaatacaagaCTGCAGCCAGTACACTGTCGTATTTGATGATGGTGATATAACTACACTGAGAAGATCAGCTCTGTGTCTGAAGAGCGGGAGACATTTCAATGAAAGTGAGACGTTAGATCAGTTGCCACTTACACATCCTGAGCACTTCTCAACACCTGTTATAGCTGGACGACGAGGACGGAGGGGAAGAGCTCAGTCGTCGGAGAGCGAAAGCGAGAGTAGCGGGTCGCGCCGCGCGGCGGACAGTGAGCCGCACGTGGGCCGAGTGGTGCTGGTGgaggcggcgggcgcgggtgagCGGCGCCGCCCCCACCAGCCCGCCTTCCCCGCGCTCGTCGTCTCGCCCACGCCCGTCATCAAGGTCAAGGAGGACTACCTGGTGCGCTCGTTCAAGGACGGACGATATTACACGGTACCGAAGAAGGAGGCGCGCGAATTCCGGCGCGGTTCGGCGCCGCTGGAGTGGTGCGGCGTGGACGCGGCGCTACAGTACCTCAACAACGGCGTGCTGCCGCCACACTGGGACCGCGACTCCATATTTAACGAGCCCAGGAACACCTCCGATGATagtTCCGATGACGAGCCTCGTGAGGAGAAGGATCATTTCGTGGCCCAGCTGTACAAGTTCATGGACGACCGCGGCACGCCGCTCAACCGCAACCCCACCATCGCCAACAAAGACATCGACTTGTACAGATTGTTCCGAGTTGTTCAGAAAAACGGTGGTTATAATCGTGTCACCAACCAAAATCAATGGAAAACAATAGCAGACAAAATGGGCTTCCATCCTGTCACTACCAGTATTACCAACCTATGCAAACAAGCatataaaaaGTTCCTGCACAGTTTCGAGGACTTCTACCGCAAGCTCGGCGTGACGCTGGTGGCGCACCCGCGTGGCGCACGCACGCCGCCCGCCGGTCGCTCGCTAATCCGCGACCGCGACCGCCAGCCGCCCGCCGCCTCGCCGCAGCCGACCGCGCCGCAACCCCCGCAGCCCGCACAGCGAACAAAAGACAAGGAGTCCGATAAGAGTGAGACGGACAAAAGTGAGAAAGAAGAGAAGATAGAGAAGGCGAAGGAGAAGCCGCGCGCCAGCGACGAGGACGACAGCGCCGACAACCAGCCGCTGCTCGCCACCACCACGCCCAAGGTTGAGAAGGAGAAAGAAAAAGAGAAGGATAAACCAATCGCCGAAGAAAAGGCTCCGAGCAAACCTCGCTCCCAATCCAAAACTCGCAGCCTGCCGCCCGTGAAAACTGAACCTCTCGAGAAAAGAACTCCAAAGAGAAAAGTGCTTTCGTCGAAATTGAGCGACACCGCGAGTGTAGGCAGCGCGCGCGCATCCCGCAGGCCTCACGTCTCTACCGACAGCGATAGCTCGGGAAGGGCTTCGAGATGTGGCGTGACAAAAAAGATGCAGAGCCGGCGCAGTCAGAGCGCCAACTCGGCAAGCAGCGGCAACACCATCGCCTCCAATAGCAGCAAGAGGCCGCGCAAGCGGAAATCGACCGAGCCGTCCACAAGCGAGCCCATGCGGGCGTGCGGCGCCGCGGTGAAGGCGCAGGTCGGCGACAAGCTCAAGGTGTACTACGGTCCCACCCAGTCAGAGTCCAAGGTGACGTACGAGGCAAAGGTGATCGAGGTGTCGGCGGCGGGCGCGCTGCGTGTGCACTACACGGGCTGGAACACGCGCTACGACGAGTGGATCAAGCCGCAGCGCATCGCGCTCAACGTCACGCAGCACGAGGCGAGAAACAAGAAGGGCACGATACTCAACCGGCGAGCTAGAACTAAGAGGACTGAAAGAACTGaagAATCATCAGCACGATCGGATTCCGACAGCTCCGACTCTGACGTAAATGAAAAGAGACCTGCCAAGAAGTTAGATGATAAAAGTAttgtaaaaacaaCATCAAGACCAAAAGAAAGTAAACCGAACGATGGAAACAACTCTAGTAAGGCGCGAAAAAGACCAGTCCGAATTATATCAACACCACCCACAACATCTAGTCTACCTAAGAAACCTCGTGTCGCGGACACTACCCACAAAGGCCGCGACTATGATCTCAACGAGATTAGATCAGAATTAAAGGGTCTTCAAACAGTTAAACAAGAAGCAGAAGAAAATGTAAAGACGGAAACTCCTCAGAAAGAACCTGTGCTTAGTCCGATACAAACGGCCACCGCGACCGATCCGCAGCCCTCTGTCTCTGTGGAGAAACAAGCCGAGGATGTTTACGAATTTAAGGAGCCCGAGCCTTTCGAGCTAGAACTACACGATGAGAAAAAGAAGAGGTCTCATCGTATATTTGATGACATCTCTCCCAGTAAATATACATCAACATTGTCCAAGTCTTTGAGTGAAGAAATTTCAGATGACTCTATAAGACGACCTACATCGTTTAGGTCACCGTCCTTATCGCCCTTCCGAGAATTCGGAACATCACGAGATGCTCCTGAGAGGCAAAGTCCCGAAGATAATTCTAAAGATGGTTTGTTTTCTTTAGACGATGATTCGATGCCCGGAGAAGGTAGTTCGGGACCTATATTTGAAGGTTTCACCCCTGCTAAGAATCAGGAAACTTACTCTAAAAAGAACAAAGTCAGTAAACTAAGAGAACTTATTGATGATTCTCCGGACAGTCCAGCCGATGATGAACAATCGTCAGAAGACGATTCAGACGAAGCACTAAAAGTAGCACCACAAGAGCCAACCCCGGAACTGCCACCAAAAGAGGCTATTAAAACACCTGAACCTATCAAGGAAGAAGACAACGATgccgacgacgacgacgatgatgacgacgacgacgacgacgacgatgacaAGGAGACTGACACGTCGAAGGCTGTCAACGACGCTATTTTGTCTCTAAAAGATATTCCTGCTATTGAAACTGTCCCTGAACCTCCTAAAACTCCCCCTCCTCCTACCAAGGAAACGTCTTCCACAAATGTGCAACCCGTTATAGAAACCAAAACAGAAAGTAAAGAAATCAAGGATGAGGCAAAAGTGAACGATATACCGCTTCCGACTGCAGAACCAAAACCAAAAATAGAGAAATTAGACCGCGACCCGGTAATTCCAAAATTAGAACCTCCTTCGAGTCCCTTGATAGATACAGAAGAAGATAAATCTGAACCCGATAGCCCTGCGAGAATCGACGTTCTACCAGTGCCACCGCCAGGCTTCCTTTTGCAATCTGAAGGTCCAAAAATTgctgaaaaattattaaaagctaTTAACAGTGCAAAAATATTATCCATGTCTCCTACTCCTACTGAAGAGAAACCAGAAAGTCCTAAGGAGGAAAATAAGAAAGTTGAAGAGGCGCCGCCAGCGAAGAGTGAACCGCCAGCACCTCCAAAACCCGACCTTCTTAAGCCCGTTACCAAACTCGATGCCGTCAAAAGGATAAGTCCGGCGGAAGTTCGAGAATCTATATTCGGCGAGCCTTCGAAGATGAGCGACATGAAACACGAGCTGGCCGATATCAAAAAGGTCAAACCAAAGGACCCGTCTCCGCCTCGATTGCAAAGCCCACTCAGTATATTAGAAAGAAGAAAAAGCGTTGCAGAACTGCAACTGCCTGCACCCGGAAAAAATAAAGTGCTCAGTGACACCATACAAAAACTGTCCAGTCAAATAAACCAGTCCGTGGCCGCAGCGAGTATTCCGATACCTCCATTCATCGCCGCCGACAGGAGCGACTCCAGCGACTCCGATGACTCAGATCAAAGGCTAATAATCGACAAGCTGTCTGAGGAATGGAGCGGTGGTAGCGGTGGCAGCGGGCGGCTGGCGGCGCGCGCGTTGCACGCCAGCAAGTCGCCCGGCGAGTGGAGCGCGGGCGAGTCGCTGCTCATGCTCGAGGACGCCTGCAAGAACGAGCGCAAGCACAGCGCGAACGTGGTGGTGGCGGGCGGTACGCGCGCGGGCGAGGAGGACAGCAACCTGTCGCTGCTGCTGTGCGAGGAGACCATCCCCGGCTCGCCCGCACCCGACGACCCGCCGCCGCGGCACCACCTGCCCTTCGCCTGCGCGCCGCCGCACCACGTCGCCAAggGCGAGGAGCGTCATGGCGCGGGGGTCGCGGGCGGCGGGGCGACGCGGGAGCGCGAGACGGGCCCGGCGGAGGGTGCGCGGAGCGAGGGCTGGCGGCGCCGCGCCGACCGCACGCCGCCCACGACCTCCACCACGCCCGATAGCAGTCTCGACCTGTCGCCACAcagGGAAAGGCGTATATCGGAACGAGACAGCCCATCAGAGCGGAAAGAGGATGAAGATGATAGTAACATACAAGATCCTGTTGGACATGaAAAACGTTTAGCAAATGTATGCATGTGTTATGAAGTGGGCGGTCGGTCGCGCAAAGCGTCGGAGTCGGGTGCGGGTCGCACGCGCGGGCGGCGACGCCGCGACACCGACGAGCCGTCGCCCGCGACGCCGCACTCACCCGCCGCCGCGCCTGCGCCGCTCAAGTACAACTTCTACGTGGAACTGGATCCATCGTGGGATAGTCTGACTCGAATAAAGATTTTAACGAATCAAATGGCGGCGCTGCGCAAGACGTACAGCTCCGTGCGGGCAGAACTTGTCGCGATCGACCGCCGCCGCAAGAAACTACGGCGCAAAGAAAGAGAAGCTATCAAGGCAGCCAAGGCGTCATGTGCGTGA
Protein Sequence
MQGDDPPFLPVGTEVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGITTVNDDVIKGTLRVGNTVEVRQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSSESESESSGSRRAADSEPHVGRVVLVEAAGAGERRRPHQPAFPALVVSPTPVIKVKEDYLVRSFKDGRYYTVPKKEAREFRRGSAPLEWCGVDAALQYLNNGVLPPHWDRDSIFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANKDIDLYRLFRVVQKNGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDRQPPAASPQPTAPQPPQPAQRTKDKESDKSETDKSEKEEKIEKAKEKPRASDEDDSADNQPLLATTTPKVEKEKEKEKDKPIAEEKAPSKPRSQSKTRSLPPVKTEPLEKRTPKRKVLSSKLSDTASVGSARASRRPHVSTDSDSSGRASRCGVTKKMQSRRSQSANSASSGNTIASNSSKRPRKRKSTEPSTSEPMRACGAAVKAQVGDKLKVYYGPTQSESKVTYEAKVIEVSAAGALRVHYTGWNTRYDEWIKPQRIALNVTQHEARNKKGTILNRRARTKRTERTEESSARSDSDSSDSDVNEKRPAKKLDDKSIVKTTSRPKESKPNDGNNSSKARKRPVRIISTPPTTSSLPKKPRVADTTHKGRDYDLNEIRSELKGLQTVKQEAEENVKTETPQKEPVLSPIQTATATDPQPSVSVEKQAEDVYEFKEPEPFELELHDEKKKRSHRIFDDISPSKYTSTLSKSLSEEISDDSIRRPTSFRSPSLSPFREFGTSRDAPERQSPEDNSKDGLFSLDDDSMPGEGSSGPIFEGFTPAKNQETYSKKNKVSKLRELIDDSPDSPADDEQSSEDDSDEALKVAPQEPTPELPPKEAIKTPEPIKEEDNDADDDDDDDDDDDDDDDKETDTSKAVNDAILSLKDIPAIETVPEPPKTPPPPTKETSSTNVQPVIETKTESKEIKDEAKVNDIPLPTAEPKPKIEKLDRDPVIPKLEPPSSPLIDTEEDKSEPDSPARIDVLPVPPPGFLLQSEGPKIAEKLLKAINSAKILSMSPTPTEEKPESPKEENKKVEEAPPAKSEPPAPPKPDLLKPVTKLDAVKRISPAEVRESIFGEPSKMSDMKHELADIKKVKPKDPSPPRLQSPLSILERRKSVAELQLPAPGKNKVLSDTIQKLSSQINQSVAAASIPIPPFIAADRSDSSDSDDSDQRLIIDKLSEEWSGGSGGSGRLAARALHASKSPGEWSAGESLLMLEDACKNERKHSANVVVAGGTRAGEEDSNLSLLLCEETIPGSPAPDDPPPRHHLPFACAPPHHVAKGEERHGAGVAGGGATRERETGPAEGARSEGWRRRADRTPPTTSTTPDSSLDLSPHRERRISERDSPSERKEDEDDSNIQDPVGHEKRLANVCMCYEVGGRSRKASESGAGRTRGRRRRDTDEPSPATPHSPAAAPAPLKYNFYVELDPSWDSLTRIKILTNQMAALRKTYSSVRAELVAIDRRRKKLRRKEREAIKAAKASCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-