Psol008076.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- stc
- Assembly
- GCA_009761765.1
- Location
- chr5:3407644-3414722[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.68 8e+03 -3.6 1.6 15 19 126 130 125 130 0.81 2 14 0.04 4.7e+02 0.4 0.1 4 10 160 166 159 167 0.94 3 14 8.7e-08 0.001 18.4 15.1 3 19 180 196 179 196 0.93 4 14 7.7e-09 9e-05 21.8 8.9 1 18 232 249 232 250 0.97 5 14 1.8e-08 0.00021 20.6 14.3 1 19 288 306 288 306 0.98 6 14 0.17 2e+03 -1.7 0.9 5 10 336 341 336 341 0.95 7 14 0.00013 1.5 8.3 11.7 4 19 354 369 347 369 0.87 8 14 1 1.2e+04 -5.3 6.5 5 10 401 406 397 407 0.60 9 14 0.58 6.8e+03 -3.4 1.5 4 10 412 418 411 418 0.86 10 14 5.5e-09 6.4e-05 22.3 11.4 1 18 424 441 424 442 0.97 11 14 0.37 4.3e+03 -2.7 0.8 6 10 471 475 470 476 0.70 12 14 1 1.2e+04 -8.8 15.4 4 18 479 498 478 499 0.72 13 14 7.8e-08 0.00091 18.6 12.0 1 16 535 550 535 560 0.91 14 14 0.00011 1.3 8.5 16.3 1 19 567 586 567 586 0.97
Sequence Information
- Coding Sequence
- ATGTCGAATAAGGAAAACGGATACGGCGGCAGGAATCAGCAAAGATACTACGATAACAGAAGGTACCAGCAATACGATAATTCTGATTATTATAATCGTAATCGTGGTGGACCGCAGTGGTACGATAATGCGTATGGAAATAAACCAACGCAGAGTTATAAAGATAGGAGGAATGACGTCGAAGAAAAATCGATTTGCCAGAGAGAAAGATTGACACAACAGTTGAACGAAGGTGTATTAGAATGTCTCGTCTGTTGCGAACGTATTAAGCAGCGTGAACCGGTGTGGAATTGCTCGAATTGTTTTCACGTTTTACATTTATGGTGTATCACCAAGTGGGCCAAGTCTTCTAAAAATGATAATAATAACTGGAGGTGTCCTGCGTGCCAAAACGAAAGCGTCAAGATACCCGATAAATATATGTGTTTTTGCGGTAAAACGAGACTACAAACTGAATGGAATCGTACAGATACTGCTCATTCGTGCGGTGAAATATGCGGTAAAAGTAAAGAAAATCCGACACCATGGTTTATATGCGAACATCGTTGTAATTTGTTATGCCATCCGGGTCCATGTCCACCTTGCACCATTCAGGTGACAAGGGAATGCGGTTGTGGGAGGACTACTAGAACGATACAGTGTAGCTTTAAAACGCCCATTTTATGCGGTGCAGTTTGCGATCGCTTACTGAATTGTGGTATTCATCGATGCTTGAAGACCTGCCATTTCGGCGAATGTGGAGCTTGTGATTCGAAAATTGAAAAGGAATGCTATTGCGGCAAAAAAACAAAAGATTTAATCTGCGGCTCCGAAGAAGCGGAGAATTTCAGCTGCGGAGATAAATGCGCTAAATCTTTAGAGTGCGGTAATCACAAATGCGACATGACATGTCATCCCGGCGAATGTGGCCTTTGTCCGAGATCTCCGGTTGTTGTGGACACATGTTGTTGCGGTAAGACACCTTTAAAAGAGAACACTCGTACGTCGTGCTTGGATCCGGTACCAACTTGTGAGAATATCTGTGAAAAACCATTGCCGTGCGGATCACCAAATAAACCCCATGTTTGTGAATCGGTGTGTCATGAAAATGAATGCAGTCCATGTAAAAAGGTGACTTTGGTTAAATGCCGATGCGGAGCTAAAGAAAAATCCGTACCTTGTGCTCAAATTAATAAAGTCGAAGAATTTAAATGTCAGAAAAAATGTAACAAGTTATGCTGTATCGATGTGGAGCATATCTGTCCCCAACGTTGCAGTGGAACGCTAAGTTGTGGTAAACATCGTTGCGAGCTTCTTTGCCATCGCGGTAAATGCGGACGATGTTTGCAAAGCAGTTTCGAAGAACTTTACTGCCATTGTGGTCATTCTGTGATTTACCCGCCAGTGCCTTGTGGAACAAAACCACCAGCTTGCGATCAGCCATGCAAACGTCAACATAACTGTGAACATCCGCCATTGCATGTCTGCCACTCCGAACGTGAGTGCCCTCCTTGTATCGTATTCACGGATAAATTATGTTACGGCGGACACGAATTACGTAAAACTATTCCTTGTTACCAAAAAGAATTTTCTTGCGGATTACCTTGCGGTCGGCCTTTACCATGTGGCTATCATAAATGTCAAGTACCGTGTCACTCGGGCGATTGTCTAACGGCATCTCAGAAATGTACGCAACCTTGTACAAGGTCTCGTGATCTATGCGGGCACCCTTGCGGTGCTCCGTGTCATACCGGTTATTGTCCGGATACACCGTGTAAAGAAAAGGTTAAAGTAACTTGCGCTTGCGGTAATTTAGTAGAACAACATCACTGCTACGAGCATACGGACGATTATCGACGTATCATGTCTGCTGCTTTTGCCGCCAAAATGAACGAATTACAGACCGAGAATTCGGTCAATATTCAAGACATGACGGAGAAAATGAACGCCGAAAAGATTAACTTGAGGACTCTAAGCAAAAAAGTCTCTAAGCAAAAAAGTCGTAGTTATTCGTTCGAGGTGATGAACAAAGAGAAACGTCAATTCGTACACGAATATTGTGCTCATTTTGGCTGTGAATCCGAAGCATACGACGCCGAACCTAAACGAAATGTCGTAGCAATTGCCGTTAAAGGAAGATGTTGGTTACCCGCATATTCAGTGCTGGAGGTTTTACAGCGCGAGAGCGGACAACGAAAAGTACCGTTACCAGTATTTAATAAAAAATCAAGGAGTACGTACGAGTTGAAGGATTAA
- Protein Sequence
- MSNKENGYGGRNQQRYYDNRRYQQYDNSDYYNRNRGGPQWYDNAYGNKPTQSYKDRRNDVEEKSICQRERLTQQLNEGVLECLVCCERIKQREPVWNCSNCFHVLHLWCITKWAKSSKNDNNNWRCPACQNESVKIPDKYMCFCGKTRLQTEWNRTDTAHSCGEICGKSKENPTPWFICEHRCNLLCHPGPCPPCTIQVTRECGCGRTTRTIQCSFKTPILCGAVCDRLLNCGIHRCLKTCHFGECGACDSKIEKECYCGKKTKDLICGSEEAENFSCGDKCAKSLECGNHKCDMTCHPGECGLCPRSPVVVDTCCCGKTPLKENTRTSCLDPVPTCENICEKPLPCGSPNKPHVCESVCHENECSPCKKVTLVKCRCGAKEKSVPCAQINKVEEFKCQKKCNKLCCIDVEHICPQRCSGTLSCGKHRCELLCHRGKCGRCLQSSFEELYCHCGHSVIYPPVPCGTKPPACDQPCKRQHNCEHPPLHVCHSERECPPCIVFTDKLCYGGHELRKTIPCYQKEFSCGLPCGRPLPCGYHKCQVPCHSGDCLTASQKCTQPCTRSRDLCGHPCGAPCHTGYCPDTPCKEKVKVTCACGNLVEQHHCYEHTDDYRRIMSAAFAAKMNELQTENSVNIQDMTEKMNAEKINLRTLSKKVSKQKSRSYSFEVMNKEKRQFVHEYCAHFGCESEAYDAEPKRNVVAIAVKGRCWLPAYSVLEVLQRESGQRKVPLPVFNKKSRSTYELKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -