Psol001396.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- pnr
- Assembly
- GCA_009761765.1
- Location
- chr1:37735346-37739531[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-19 7.3e-16 56.9 3.2 1 34 14 46 14 48 0.97 2 2 2.1e-20 5e-17 60.6 3.8 1 35 71 104 71 105 0.97
Sequence Information
- Coding Sequence
- ATGAAAGAAGAGATCGATTATTATACGGAAGGTAGAGAATGCGTTAACTGCGGAGCGATTTCCACTCCATTATGGCGACGCGACGGCACAGGACATTACTTATGCAATGCTTGCGGATTATACCACAAAATGAACGGCATGAATCGCCCACTCGTCAGACAGCCTAGAAGGCTGGTCAGTTTTACCGCTTCACGTCGCATGGGATTAACCTGCTCGAATTGCAGTACTAGCACAACCTCTCTATGGCGAAGAAACGCGAATGGCGAGCCCGTGTGTAACGCTTGCGGACTATACTTCAAACTACATAATGTTTCGAACCAGTAA
- Protein Sequence
- MKEEIDYYTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVRQPRRLVSFTASRRMGLTCSNCSTSTTSLWRRNANGEPVCNACGLYFKLHNVSNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -