Basic Information

Insect: Phenacoccus solenopsis
Gene Symbol: zld
Assembly: GCA_009761765.1
Location: chr5:26516329-26524327[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.028 1.9 8.5 0.6 2 23 4 26 3 26 0.93

2 7 0.04 2.7 8.0 1.5 2 23 155 177 154 177 0.95

3 7 0.0014 0.092 12.7 2.8 1 23 341 365 341 365 0.92

4 7 0.38 25 5.0 8.8 1 23 657 680 657 680 0.96

5 7 0.00087 0.059 13.3 2.0 1 23 686 708 686 708 0.96

6 7 1.5e-05 0.001 18.8 4.8 1 23 714 736 714 736 0.97

7 7 2e-05 0.0014 18.4 2.6 1 23 742 764 742 764 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.028	1.9	8.5	0.6	2	23	4	26	3	26	0.93
2	7	0.04	2.7	8.0	1.5	2	23	155	177	154	177	0.95
3	7	0.0014	0.092	12.7	2.8	1	23	341	365	341	365	0.92
4	7	0.38	25	5.0	8.8	1	23	657	680	657	680	0.96
5	7	0.00087	0.059	13.3	2.0	1	23	686	708	686	708	0.96
6	7	1.5e-05	0.001	18.8	4.8	1	23	714	736	714	736	0.97
7	7	2e-05	0.0014	18.4	2.6	1	23	742	764	742	764	0.98

Sequence Information

Coding Sequence: ATGTCCCTTCGATGTCGTTCGTGTAATATCGCGTTTCATGACAACGGTTCTTTGGAAGTGCACTTTCAGTACGCTCATTCGAACGGTGACAACGTCGCGGAGCCATCGAGGACCGAGCAGCCGCCAGATGCTGATGCGACCGAAAACAACAACAATTTTTTCAAATATCAGAGCATCGAGAACTCCAACGATTCCGTCATGACCGCAATATCGCCCGGTACCGATAACCGCGAATTCCAACTACCTCCGGTACAGCATCGAGATCTCATGTACGATGTGCAGCAGCATAATTACGCCGATAATTATATGCTTAATTCGCAAGAATATTCGCGCTCTTCGCCCATCGTCCAGAACACCGCTGCATATCCATTCGCCGCTTCTAATGATCAGCGGTACCATCCTTATTACAAACAGGGATTCAGAGAAGTGCCTCGTAATCAAGTCGGCGCTCCGTTGGTCATTCGATGCGATAAGTGCGATTTCATCTGCGCCTCGCAGGATGTACTTATGCATCATTTCAATGTCGCTCACGGATCCATACCATCTCTGGGGATTCACTCGTTTAATCCCAGATTCGGTAATCCGCCGGTGAATGGGGGAGACGGTGAACCTCAAGCTGAAATCTTAGATTTGGATTCGCATAAAGTACATGTTTACCAACCGCCCAATGGAGAGGATAGCCAGGATAGTGATCATCGTAATTCTATGGATCCTTGGATGCACGAGGATAAAAAGTATTTTCATCAGCAGCTCCAAATCTCGCAGCAAAACGGAGGCGCTACCAATGGCAAAGGCGGTACACCGTTACCTTCACCTGATTTCGGTAGCGTTTCCACGACGACGGACAATATCGAAAATCTGCAATCAACTCGATCGCCGTACTACGATCAAAATCCAAACGTTAATTCAACGCCGGCCCAGATCTCCTCCTCCGACAATCCGACCGGTAGAAGTTCCTCGAAAAACAGTAAAAACTCAAACGGCACGTGGAAGTCGAACGAAGCTCGCAGGCCTAAAACATACAATTGTTCAGCTTGCAACAAATGGTTCACATCTTCGGGCCATTTGAAGCGTCACTACAACACGACGCTACACAAAAACGCGGTAAAACAAAGCGGAGCTCCGGACCCAGCTACAATGCCAGTTAGCGCCCATCACCATCCGCACAAAGATCCTTCATACTCGTCTAGTCGACAAGTGAAGAATTCGCCGCCCGTTTCGGAGGCTAGTGATACGCCGCCGAACAAATTAAACGATAGTTTTTCGTCCGCTCGCAACGCCTCACAAATACCACCGAACGCTTTTTTACACAATTCCCCAAACTTGATGGCAGGTCCCTCGGAGATGCCGGGGGGCCTGCTCCATCACCCTTCCTATACCCAATCCACTCCCGATCTAATCAAGTCCCCGTCACCGATTACCTCCATTCCTCCCCATACGAATTACCTCCCTTTCGGGGCGACGCCGCAGTCGCCGCACACCCTGCCGTTTTTTCAGCAGCATACGCCGACGCCGCTTTACCCAAACTTCCAGTCCCCCCACGTTTCTACCACCCATCAGGTTACCACGAACAACCATACTGGTAATTTGACTAACGTGCCAGCGATGACTGCGACCACGGATGACTGCAAGCCAACGTTGCCGAGTTTCTCGTGCATACAGAAGAATCCGTGGAATTCGCAGAATCTCGGTTTGGAGCAGTTCTTAAACACGTTAGATAACGGGGGTAACGTGGGGGGATCGTTCACGTCTAACGACGTCGAAACCGCCGCCAACTTATTGTTGAAGAATTTCGATAACGAAAAATTACCCGAACCGGTATTCATCAAAGTTGAAAGACCGAATTCCGTTAGCTCCGAAGAAGTGGCTCAGATCAAGCAGGAGTTAACTGGGCAACGTAATTCGCCCATCGATGATACCAATGTCACCAGCAGCACAGTCGAGCAAGGATCACCAGTCAGTGGTGGATATAATTGCACTAGATGCCGTAAACACTTCAACAAAGCTTGCTATCTTACTCAACACAATAAAAGCTTCCACTCAGGATACAAACCATTTAAATGCGGCAGATGCGGTAAACGATTCCAAGACACTGAACAGTTCAAGGTACATTCCGATAAACACGCCGGAGATAAACCATATAAGTGTGAAATTTGCCCCAAACAGTTTAACCATAAGACCGATCTCAGACGTCATGCTTGCCTGCATACCAACGTGCGGCCATTCTCGTGCGATATCTGCACCAAGGGATTTATCAGGAAAGATCACATGTTGAAGCATCGCGAAACCCATCAAAATCGTAAGAACGTTCAACGTCGGATACGCGCTCCCAAGCTGAAAAAAGAAATAGATTTCGATTTTTAA
Protein Sequence: MSLRCRSCNIAFHDNGSLEVHFQYAHSNGDNVAEPSRTEQPPDADATENNNNFFKYQSIENSNDSVMTAISPGTDNREFQLPPVQHRDLMYDVQQHNYADNYMLNSQEYSRSSPIVQNTAAYPFAASNDQRYHPYYKQGFREVPRNQVGAPLVIRCDKCDFICASQDVLMHHFNVAHGSIPSLGIHSFNPRFGNPPVNGGDGEPQAEILDLDSHKVHVYQPPNGEDSQDSDHRNSMDPWMHEDKKYFHQQLQISQQNGGATNGKGGTPLPSPDFGSVSTTTDNIENLQSTRSPYYDQNPNVNSTPAQISSSDNPTGRSSSKNSKNSNGTWKSNEARRPKTYNCSACNKWFTSSGHLKRHYNTTLHKNAVKQSGAPDPATMPVSAHHHPHKDPSYSSSRQVKNSPPVSEASDTPPNKLNDSFSSARNASQIPPNAFLHNSPNLMAGPSEMPGGLLHHPSYTQSTPDLIKSPSPITSIPPHTNYLPFGATPQSPHTLPFFQQHTPTPLYPNFQSPHVSTTHQVTTNNHTGNLTNVPAMTATTDDCKPTLPSFSCIQKNPWNSQNLGLEQFLNTLDNGGNVGGSFTSNDVETAANLLLKNFDNEKLPEPVFIKVERPNSVSSEEVAQIKQELTGQRNSPIDDTNVTSSTVEQGSPVSGGYNCTRCRKHFNKACYLTQHNKSFHSGYKPFKCGRCGKRFQDTEQFKVHSDKHAGDKPYKCEICPKQFNHKTDLRRHACLHTNVRPFSCDICTKGFIRKDHMLKHRETHQNRKNVQRRIRAPKLKKEIDFDF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00725911;
90% Identity: -
80% Identity: -