Psol010348.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- Zfy1
- Assembly
- GCA_009761765.1
- Location
- scaffold221:22844-28250[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.036 2.5 8.2 0.8 2 23 12 34 11 34 0.96 2 20 0.65 44 4.2 1.7 1 23 45 67 45 67 0.92 3 20 0.0031 0.21 11.6 5.9 2 23 93 115 93 115 0.96 4 20 9.8 6.6e+02 0.5 1.5 3 23 163 185 161 186 0.86 5 20 0.71 48 4.1 0.3 2 23 195 217 195 217 0.90 6 20 0.00039 0.027 14.4 0.1 3 23 225 246 223 246 0.95 7 20 0.00039 0.027 14.4 0.8 3 23 258 278 256 278 0.96 8 20 0.00077 0.052 13.4 1.4 1 23 329 352 329 352 0.96 9 20 0.0044 0.29 11.1 1.5 2 23 359 381 358 381 0.95 10 20 5e-05 0.0034 17.2 1.0 1 21 408 428 408 429 0.95 11 20 2.8e-05 0.0019 18.0 0.6 1 23 447 470 447 470 0.96 12 20 0.22 15 5.7 0.2 1 23 473 499 473 499 0.93 13 20 0.0045 0.3 11.0 0.1 2 23 506 529 505 529 0.92 14 20 1.8e-05 0.0012 18.6 1.1 1 23 536 559 536 559 0.97 15 20 0.024 1.6 8.8 0.5 1 23 596 619 596 619 0.94 16 20 0.0087 0.59 10.1 1.6 3 23 626 646 625 646 0.95 17 20 0.00052 0.035 14.0 0.4 1 23 735 758 735 758 0.93 18 20 1.6 1.1e+02 3.0 1.1 3 23 803 824 802 824 0.90 19 20 0.13 8.5 6.5 1.1 1 23 830 853 830 853 0.95 20 20 0.14 9.3 6.4 5.0 1 23 896 918 896 918 0.96
Sequence Information
- Coding Sequence
- ATGGTGCACGCCCATCGTGAAGAGGCCTCCGTTTCTTGTGGTATTTGTTTGAAAATTTGTTGCGACAATATTACGCTGATCGAACATGTGAATACGGCCCATTCCAGCGATAAAGCTGTAGTTCAGCGTCGTTATTCCTGCCAAGTATGTGGTAGGCAGCACGACTCGCGTCAGAAATTGTTGAAACACGCCACCTTGCATACATTGATTGACAACCAAGGACAAACGATACAACCGGAGGAAATGGTATCATTGAATAACGCTTTCGCTCCGCGTGAATGCTCCATGTGTCATAGAAAATTCTTCAATGAGGAAAAGCTCAATCATCATATGCAGAGCTTTCACAACTACACCAACGAAAATTCGGTGTCGCTTTCGTCCACGTGCGCACTTCATAAATGCGAATTGTGTTCTTCGGCCCATGCAACGCGAATGGACCGTTGGTGGCACATGTACTATTCCCACAGCGGCGATACACGTGTCACGTGCGAACGTAACAGCTGCCGCAAAGTATTTGTTTCAGTGGCGCTTAAAGACCAACATTCGAAGACGCATCACGAAATGCAGGGTAATTTCACCAATACGTGTGAGATTTGCGGAAAATTATGGGAATCGCGGACAGTTTTTTACAAGCATATGATGAACGTGCATCCCAAATGTTTGCCTACCATATGCGGTGTTTGTACTAAGGTATTCAGTAGTGTACCTGAATTGAGAACCCATGTACGTAACGAGCATACGCATCTGCAGCACTCGACAACTTCCGTATGCTGCGACATTTGCGGTCGACCGTACGCTGAACGTTCAAAAATGTTACGTCATCGACGGGTGCATAATGTTAGGGACAGCGTCCCATTCACCGCTTCCACTACTACCGCCACCGCTATGAAGAAAAAAGACGACCTTGTTTGCGCTTTCTGCCCGCATTTGAATTTCGATGAATACCAGCATGTGGCCGAACATCGCCGAAACGTACATCAGCTGTTCGTGTGCGACCTGTGTCCCAAATTCTACAATGGTAACAATCATTTGTGGAAACACGTAAGCAAGCAACACAAAGGTGATCCCAATGTTACCTGTAACATATGTCTGCGCACGTCCGCTAGTCGAGCACATCTGGAACGTCATAAACTCAAATACCACAGCGACCCGTTCGACAAACTCATTCACAAACAAACAAAAGCTGCAAGTGCGACTGCGACTATTGTCTCTTCGATTTCGCATAAATGCGGTCTGTGTGGTAAAATCTTTCGTATACGCAGTTTGCTGAAAAAACATTTGAAATCGTGTAAAGGTGCGAAACCAACATTGGCGAAGGTGCAGCCAGTGAATGGGGTTTTCCCGTGCGCCAAATGCGGAAAAGTGTTTGAGCTTCAAAACTTGCTGTACAAGCATATGAAAAATTCGCACGTGCAGCATACATGCGAGGTATGCCCGTCACCGGCGCCGTCGTTCGATACAAAAAAAGACCTACTCGGACACATACGTGAGAGACATTCGAATCATCACGAATTAGTGTGTGATGTGGCAGGTTGCGGTAAAGTGTTGCGTTTGAAGGCAGATTTAAAAAAACACAAATTGGAGCACGCTCGTGGCTATTTCACTTATATATGCGAGATTTGTGGCGATATGTTTTCGAATCGAAAGAAACTACGAAAACATTTGCAAACCTACCACAAAAGCGACGTAAAGTTCTTGTGTGCCGTTTGCGTCGCAATTCATCCGTCACTTCAAGACTTGACCACTCACGTGCATTCTGCTCATCCATTCGTACTTCATCGGCCATACACGTGCCAGATATGCGGTAAATGTTGGTCGGTCAGCAGTAAAGCTGTCGAACATATTAGTAAAGTTCACGGCAAGGAATACAGACCATGCAAAATATGTTGGAAAGTATTTACCGACCAACGTATTTTCGAGCAACACACTAATCACCATCCGCCCATTGAGCAAAAATCTTCGGCAACTACGCCGATGCTGACTGATTCGCACGAGTCATCGTCCGTGCTTTCACCAACCGACGTCGATAATTGTAAATCCTCTGCTGCATCCGACGCTAGCAAAAACGCGCTGCTGCCGTCGCCGAAGTTGTCATCTTTGACTACTGCTGTGAGCCTCGAAACAGATGATAGTCTGAAGAGGTCACTAGAGGAGGATTCATTTCGAGAAGATGGCGATGCTTGCAAACGGCTTCGACGTAAATACAAATGTGTTTCGTGTAAGCAGACCTTCCGTTCTACCGACGAATTGAACGCGCACACTGAAGCAGAGCATGCTCAACGCCCTCGCGAGCACGTTAACGATGAATCAACTTCCGAAAACCCTATCGCTATTGTCGCCGCTCCCGCTGAAGTGAAACACGCATCCAACAAATTCGAAAGGTGGACCTCAATTCGACCCATAGCGTGTGACTGTTGCGACAAAATATGGAACTCGAAGAAACAACTGTGGCAACACCTGATCCGTTCGCACGCATACGAATCGCAGTATGCGTGCGGCATTTGTTTGCAGGTTTGTCGCGACTATTTCGATTTATTTTATCACCTGGATTCGCAACATTCGACCATTATCAATGATCACGCGACTAATAAATTCTCGTGTTTTATCTGCGGTCATTACCACAATTCTCAGAGCAAACTAGATAAACATTTTTCGCTTCATAAAAATGCGCCCGCTCGTTACGAGTATACTTGCCAATATTGTCGTAAACTCTTCAAGTCGATCACTTATTATCGCGATCATGCGTGTCTGCACGCTATCGCAGCGCCAACTGAACCCAAAGTCAAAACGTATTCTGAATTCAGCGGCTTCAGCATTAATCACATACTGGCTACCAAAAATGATCGTCGTTGCGACAGTGAGACCGTTGTCGCCGATACTATCGACCAGTCAAATTCTGCTACCTACTTTGACGACGGCACTTACGACGTCAAATACGAAGGCGAGAAAATGCAGCAAGAAGTTAACGATGACGATCTAGTGGAAGAGTTGACTGAGGGAGATGACAATGAATCAAATGGATACAATCAGTCATCGGACGAACACGATAGCAACACCTTCAAAGGTTATGACGCATGTTCACCTCCACCTAAATACATGACTACCTCTGAAAGCGATAGAAGTACCGACGTGCATGCTTATGCTCTACATCTAGCGAGTGAGTATAGCGTTCTCAGCAACAGCGCAGCCAAAGTCCTAAACGGTGACTCCGCTACTGTACCAGTGGATTGCCAGTCGCCTTCATTCATTGCTAACAGCGATCAAAAGCAGAAAGCCGAGTTCGAAAGCGACACTAAAACCTTTTCATAA
- Protein Sequence
- MVHAHREEASVSCGICLKICCDNITLIEHVNTAHSSDKAVVQRRYSCQVCGRQHDSRQKLLKHATLHTLIDNQGQTIQPEEMVSLNNAFAPRECSMCHRKFFNEEKLNHHMQSFHNYTNENSVSLSSTCALHKCELCSSAHATRMDRWWHMYYSHSGDTRVTCERNSCRKVFVSVALKDQHSKTHHEMQGNFTNTCEICGKLWESRTVFYKHMMNVHPKCLPTICGVCTKVFSSVPELRTHVRNEHTHLQHSTTSVCCDICGRPYAERSKMLRHRRVHNVRDSVPFTASTTTATAMKKKDDLVCAFCPHLNFDEYQHVAEHRRNVHQLFVCDLCPKFYNGNNHLWKHVSKQHKGDPNVTCNICLRTSASRAHLERHKLKYHSDPFDKLIHKQTKAASATATIVSSISHKCGLCGKIFRIRSLLKKHLKSCKGAKPTLAKVQPVNGVFPCAKCGKVFELQNLLYKHMKNSHVQHTCEVCPSPAPSFDTKKDLLGHIRERHSNHHELVCDVAGCGKVLRLKADLKKHKLEHARGYFTYICEICGDMFSNRKKLRKHLQTYHKSDVKFLCAVCVAIHPSLQDLTTHVHSAHPFVLHRPYTCQICGKCWSVSSKAVEHISKVHGKEYRPCKICWKVFTDQRIFEQHTNHHPPIEQKSSATTPMLTDSHESSSVLSPTDVDNCKSSAASDASKNALLPSPKLSSLTTAVSLETDDSLKRSLEEDSFREDGDACKRLRRKYKCVSCKQTFRSTDELNAHTEAEHAQRPREHVNDESTSENPIAIVAAPAEVKHASNKFERWTSIRPIACDCCDKIWNSKKQLWQHLIRSHAYESQYACGICLQVCRDYFDLFYHLDSQHSTIINDHATNKFSCFICGHYHNSQSKLDKHFSLHKNAPARYEYTCQYCRKLFKSITYYRDHACLHAIAAPTEPKVKTYSEFSGFSINHILATKNDRRCDSETVVADTIDQSNSATYFDDGTYDVKYEGEKMQQEVNDDDLVEELTEGDDNESNGYNQSSDEHDSNTFKGYDACSPPPKYMTTSESDRSTDVHAYALHLASEYSVLSNSAAKVLNGDSATVPVDCQSPSFIANSDQKQKAEFESDTKTFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -