Basic Information

Insect: Phenacoccus solenopsis
Gene Symbol: -
Assembly: GCA_009761765.1
Location: chr2:43347535-43352722[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 8.6e-06 0.00058 19.6 3.5 1 23 25 47 25 47 0.98

2 28 0.001 0.067 13.1 0.9 1 23 53 75 53 75 0.98

3 28 0.0033 0.23 11.4 1.1 2 23 83 105 82 105 0.95

4 28 7e-05 0.0047 16.7 0.8 2 23 112 133 111 133 0.97

5 28 0.00022 0.015 15.2 1.4 3 23 179 199 178 199 0.97

6 28 0.00098 0.066 13.1 1.7 1 23 205 227 205 227 0.97

7 28 6.3e-07 4.2e-05 23.2 0.7 1 23 233 255 233 255 0.98

8 28 0.00066 0.044 13.7 3.7 1 23 261 283 261 283 0.97

9 28 0.0093 0.62 10.1 0.2 1 23 289 311 289 311 0.96

10 28 1e-05 0.0007 19.3 1.9 1 23 317 339 317 339 0.98

11 28 9.2e-06 0.00062 19.5 2.0 1 23 344 366 344 366 0.98

12 28 0.23 16 5.6 7.5 1 23 372 394 372 394 0.94

13 28 0.025 1.7 8.7 4.2 1 23 401 424 401 424 0.94

14 28 3.8 2.5e+02 1.8 1.6 1 19 430 448 430 451 0.93

15 28 0.023 1.6 8.8 6.3 1 23 457 479 457 479 0.97

16 28 6.1e-07 4.1e-05 23.2 0.7 1 23 513 535 513 535 0.99

17 28 0.0011 0.077 12.9 0.5 1 23 541 563 541 563 0.98

18 28 0.0001 0.0069 16.2 1.0 1 22 569 590 569 593 0.90

19 28 0.0049 0.33 10.9 1.7 1 23 612 635 612 635 0.94

20 28 0.25 17 5.6 7.4 1 23 641 663 641 663 0.98

21 28 0.00027 0.018 14.9 0.2 2 23 669 691 668 691 0.96

22 28 0.001 0.071 13.0 0.1 1 23 697 720 697 720 0.96

23 28 1.3e-06 8.6e-05 22.2 1.9 1 23 726 748 726 748 0.97

24 28 4.2e-05 0.0029 17.4 5.4 1 23 756 778 756 778 0.99

25 28 1.3 86 3.3 4.7 1 23 785 809 785 809 0.98

26 28 1.4e-07 9.3e-06 25.2 1.4 1 23 815 837 815 837 0.98

27 28 2.2e-05 0.0015 18.3 2.2 1 23 843 865 843 865 0.98

28 28 3.9e-05 0.0027 17.5 0.9 1 23 869 892 869 892 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	8.6e-06	0.00058	19.6	3.5	1	23	25	47	25	47	0.98
2	28	0.001	0.067	13.1	0.9	1	23	53	75	53	75	0.98
3	28	0.0033	0.23	11.4	1.1	2	23	83	105	82	105	0.95
4	28	7e-05	0.0047	16.7	0.8	2	23	112	133	111	133	0.97
5	28	0.00022	0.015	15.2	1.4	3	23	179	199	178	199	0.97
6	28	0.00098	0.066	13.1	1.7	1	23	205	227	205	227	0.97
7	28	6.3e-07	4.2e-05	23.2	0.7	1	23	233	255	233	255	0.98
8	28	0.00066	0.044	13.7	3.7	1	23	261	283	261	283	0.97
9	28	0.0093	0.62	10.1	0.2	1	23	289	311	289	311	0.96
10	28	1e-05	0.0007	19.3	1.9	1	23	317	339	317	339	0.98
11	28	9.2e-06	0.00062	19.5	2.0	1	23	344	366	344	366	0.98
12	28	0.23	16	5.6	7.5	1	23	372	394	372	394	0.94
13	28	0.025	1.7	8.7	4.2	1	23	401	424	401	424	0.94
14	28	3.8	2.5e+02	1.8	1.6	1	19	430	448	430	451	0.93
15	28	0.023	1.6	8.8	6.3	1	23	457	479	457	479	0.97
16	28	6.1e-07	4.1e-05	23.2	0.7	1	23	513	535	513	535	0.99
17	28	0.0011	0.077	12.9	0.5	1	23	541	563	541	563	0.98
18	28	0.0001	0.0069	16.2	1.0	1	22	569	590	569	593	0.90
19	28	0.0049	0.33	10.9	1.7	1	23	612	635	612	635	0.94
20	28	0.25	17	5.6	7.4	1	23	641	663	641	663	0.98
21	28	0.00027	0.018	14.9	0.2	2	23	669	691	668	691	0.96
22	28	0.001	0.071	13.0	0.1	1	23	697	720	697	720	0.96
23	28	1.3e-06	8.6e-05	22.2	1.9	1	23	726	748	726	748	0.97
24	28	4.2e-05	0.0029	17.4	5.4	1	23	756	778	756	778	0.99
25	28	1.3	86	3.3	4.7	1	23	785	809	785	809	0.98
26	28	1.4e-07	9.3e-06	25.2	1.4	1	23	815	837	815	837	0.98
27	28	2.2e-05	0.0015	18.3	2.2	1	23	843	865	843	865	0.98
28	28	3.9e-05	0.0027	17.5	0.9	1	23	869	892	869	892	0.97

Sequence Information

Coding Sequence: ATGATACAAGATTTTTCATATTATAAAGTAATTCCACCGAATTCATCTTGGCATACTCAGCAATTGGCGAAATTTACGTGTTCTTATTGTGGCAAAACGTTTAATCGTAGTTACAGATATCGTTTGCATGTTAATACCCATTTAAACATCAAGCCGTTTAAATGCGACGAATGTAGCGCAGCGTACACCGAAAAGCGTTATTTAATGAATCACAAAAAAATTCACGCTATGGGAAAGAAAGCGATGAAATGTGACTATTGCGACCATTCCTACGTCAGTGATTTAACACTAAGAAAGCATATTAATGCAAACCATGGTAGGAAAATGCTTAAAAAATGCGATTTATGCGAAAAAACATTTGTCACGGAGATTCAATTGCAAAATCATCTGAACCAACATATCTCCATTGAATTATCCAAGAACGAATCGACGAATGAAATGGAGGAGAAAGACGGTGGAGAAAATTACATCAGCTCTAACTCAGTGGGACCTATACAGAGCTCGGTAGAAAGTCGCAAGATCATGTCGAAGATATGTGAGTATTGTGGAAAGAAATTCAGTTCATCTTTTATACTTAAAACTCATGAGAGGAAACATTTGTGTTTGAAGCCATATAAATGTATTCAATGTTATAAAACTTTCGTGAATAAACAGGAATTATCGCGGCACGCTAGCACGCATAGCAGTTATAAGAAGTATCCTTGTGGCAAATGCGATAAAGAATTTTTCACCCCGTCGGCTCTACGTAGTCATAGGAGGACGCATTTGCAAAGCAAACCGTTCAAATGCGATCAATGTTCGATGAGGTTTCATACGAAGGAAACTTTACAACGTCATGAAAGTGTTCACTCGAAAGGAAATTCGTTCAAATGTATTCTTTGCAGCGAAGAATTTATCTCGAAGGAAAGTTTAGAAGAACATACTAATATACATTTAGGTATAGAATCACATAGATGTGACCAATGCGGCGAAACTTTCGCTGGTAAGTCGACGTTTGAGGAGCATATGAAGAAGCATTTACCAGAATTTTTTCAGTGTACTGAGTGTGATAAGAAGTTTAACGAAGAGTCCCTTTTTAAATCCCATATGACTATGCATTTAGGCCTTAAGTCGTATAAATGTAAAATATGCAAAAAGAAATTTTATTCTCGTTTAAAATTAAGATGCCATAAGATAAAGCATAAAGCTCACAAAAGTCAGTACAAATGCCCCAGATGTTGTAAGAGCTATTCATCACGAACGAGTTTACGTATTCATAACGAAAGACAACACAGGGGTCTTAGATTGTTCAAATGTCTCGCGTGTTGCAAAAAATTCGCCTTTATTTACGATTTGAAAAAACACGCTATACAGTGTAATGTGAAAACATTCGATTGTCGTACTTGTGGATGTAATTTCACCACGAAGTTAAAATTTAAGCAACACCAAAAATTACACGTCAACTTGAAAACATCAGAGAGTCCTACTGCTGATATAGGATCATTCGCTATATTAGAATTGAATCATAATATTCCAAACATTCTGGACGATAAATCATTTAAATGCGAGGAATGTGGTAAAGGATTCGTCACTAAGTCTCGTTTGAGTATTCACATCAAAAGGCACACAGGTTTCAAGCCATTCCAATGTGATTCTTGTGTTGCAACATTTTACACTAGAGCCGAATTGCAGCAACATACCATAAGACATCTGAACGTGAAAGAATTCAAGTGCGATGAATGTGGCGGAGAATTTTACACGAAGTCGGATTTAAAGCAACACAAAATACGTAAATTACACAAATGCGGGGAGTTAAATTCAAGTAACTCGGTAAGACGTTCAAGTTCAAATTTATTCAAATGTCTTGAATGCGATTCGGAATTTCATTTTCAAACTGAATTAAGGCGACATTTGCTAGCCATGCACCCGGGAGTGAAAACGTACGAGTGTAGTCTGTGTTGCAAAAAATTCTTCACACATTTAAATCTAAGCTTACACATGAAGAGACATTCGTCTAAATCTTTAAAATGTTCGGAGTGCGATGCAGCATTCTTCTATCCATCGGAGCTGGAGTATCATAAGCGCGTAAAACATTTAAAAATTAAACCATATACATGTGCCGCGTGTAATAAAGGATTCGCAATTCGACGTAATTTGAAAGCTCATTTGGAAAAAGTGCATTTAGGTATTACTTCGTATAAATGTAAAAAGTGTGACGAGAAATTTACGAATCGTGCAGAACTACGTCGACATTACGACATACACGTACCTGAAAGTGCCAAACCGTACCGTTGTAACGAATGCAATCAAAAATTTAGGTACGCTTTGCATCTGAAGAAACATACTAGATCTCACAGTCTAGGTGTCAGAAGGTACAAATGCAGCCAATGTAAACCTATGAGGAAATTTTCTAGTGTCAATAATTTCGTTTGTCATATGAGAAAACATCTGGGAATGAAGCCATTTACTTGTAATTACTGCGACAAAACGTTCGCTAGTCAAGGCAATTTGAAGTATCACATCGAAAAACATTTAGGTTTGAAAACTCACGAGTGTAAAGAATGCGGCAAGATGTTCAATGCGTATTCATCTCTTTATCAACACTACCGCGTGCATTATAAGCCCTTTCAGTGTGATATTTGTAAGCGTTTTTTCGCACAAAAATTCAGTCTATCGTTACATATAATTCGAATTCATAATAAGAATGCGAATACAGAAAACATGGACGAATTAAGCGAAATCAGCACCTTGCGGTCTTCAGAGACCACAGTGTATCCTCATGATAATGAAAGTTTGGAACAAATCTTCGAAAATATGTATTCCGAAATGAAAGCGGTTTTGAAAAAATTGGATCCGCTCATTAGAAAAACATCCGTTCTCCCTCGACCTTCATGTACCACTGTGAATAATGAAAAGACGGTGGTTTTACGTGAACTAGAAACGCTATTGGAAAACAAAACTAGAATTGTTAGCGAGTTGACCAAAGCTATCAATATTTCTACAGACTACGAATTTCCGCGGTTCAGAGGAGATGCAATTTTGAGCATCCCGATGAAGCTACAAGAAGGAACTGCCGACTGTCAACAACTTTTGGAGCGTTTAGAAAATAATAATGTCAGAGACCAGAACTATATTGATATGTTATCGAAATCGAAACGTTTTATCGAAGATATGAATAAAAATTTAGTTAGTTTGAATCATACATCTCAAGAAATCGCACGTATTACCTCGATGGTCAACAAAGAATATAAGGAATGTAAAAGAGAATTGAACAAATTTTTTGAAACCGTGCTCCCGGATCCCAGAGTTAAAGAAATTATAGGCGAACTTATCGAAAAAGCTGAAAGCAGTGAAAACGGAGAGGAATGGTATGAGGTCACTGATTCCGACTTACTCCCTGTGATATTAAAACTACAAGATTACGACATCATTGTTAGTAATCCGCAGAATGAAAAGCTGATAAAAATAATCTTAGATTAA
Protein Sequence: MIQDFSYYKVIPPNSSWHTQQLAKFTCSYCGKTFNRSYRYRLHVNTHLNIKPFKCDECSAAYTEKRYLMNHKKIHAMGKKAMKCDYCDHSYVSDLTLRKHINANHGRKMLKKCDLCEKTFVTEIQLQNHLNQHISIELSKNESTNEMEEKDGGENYISSNSVGPIQSSVESRKIMSKICEYCGKKFSSSFILKTHERKHLCLKPYKCIQCYKTFVNKQELSRHASTHSSYKKYPCGKCDKEFFTPSALRSHRRTHLQSKPFKCDQCSMRFHTKETLQRHESVHSKGNSFKCILCSEEFISKESLEEHTNIHLGIESHRCDQCGETFAGKSTFEEHMKKHLPEFFQCTECDKKFNEESLFKSHMTMHLGLKSYKCKICKKKFYSRLKLRCHKIKHKAHKSQYKCPRCCKSYSSRTSLRIHNERQHRGLRLFKCLACCKKFAFIYDLKKHAIQCNVKTFDCRTCGCNFTTKLKFKQHQKLHVNLKTSESPTADIGSFAILELNHNIPNILDDKSFKCEECGKGFVTKSRLSIHIKRHTGFKPFQCDSCVATFYTRAELQQHTIRHLNVKEFKCDECGGEFYTKSDLKQHKIRKLHKCGELNSSNSVRRSSSNLFKCLECDSEFHFQTELRRHLLAMHPGVKTYECSLCCKKFFTHLNLSLHMKRHSSKSLKCSECDAAFFYPSELEYHKRVKHLKIKPYTCAACNKGFAIRRNLKAHLEKVHLGITSYKCKKCDEKFTNRAELRRHYDIHVPESAKPYRCNECNQKFRYALHLKKHTRSHSLGVRRYKCSQCKPMRKFSSVNNFVCHMRKHLGMKPFTCNYCDKTFASQGNLKYHIEKHLGLKTHECKECGKMFNAYSSLYQHYRVHYKPFQCDICKRFFAQKFSLSLHIIRIHNKNANTENMDELSEISTLRSSETTVYPHDNESLEQIFENMYSEMKAVLKKLDPLIRKTSVLPRPSCTTVNNEKTVVLRELETLLENKTRIVSELTKAINISTDYEFPRFRGDAILSIPMKLQEGTADCQQLLERLENNNVRDQNYIDMLSKSKRFIEDMNKNLVSLNHTSQEIARITSMVNKEYKECKRELNKFFETVLPDPRVKEIIGELIEKAESSENGEEWYEVTDSDLLPVILKLQDYDIIVSNPQNEKLIKIILD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -