Psol008497.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phenacoccus solenopsis
Gene Symbol
Hivep2
Assembly
GCA_009761765.1
Location
chr5:13576644-13583010[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.41 28 4.9 0.2 1 21 74 94 74 95 0.89
2 29 0.0032 0.21 11.5 0.4 1 23 218 240 218 240 0.98
3 29 3.2e-05 0.0022 17.8 3.3 1 23 246 268 246 268 0.94
4 29 0.00014 0.0095 15.8 4.6 1 23 273 295 273 295 0.97
5 29 1.3 85 3.3 5.9 1 23 301 323 301 323 0.95
6 29 0.00011 0.0072 16.2 2.0 3 23 331 351 329 351 0.97
7 29 1.5e-06 9.9e-05 22.0 1.3 1 23 357 379 357 379 0.96
8 29 0.22 15 5.7 0.3 2 23 386 406 385 406 0.96
9 29 4.7e-06 0.00032 20.4 0.2 1 23 412 434 412 434 0.96
10 29 0.019 1.3 9.1 0.1 6 23 444 461 443 461 0.92
11 29 9.7e-07 6.5e-05 22.6 0.6 2 23 468 489 467 489 0.97
12 29 7.1e-07 4.7e-05 23.0 0.1 1 23 495 517 495 517 0.98
13 29 0.00011 0.0072 16.2 0.5 1 23 523 545 523 545 0.96
14 29 1.5e-07 1e-05 25.1 3.7 1 23 551 573 551 573 0.98
15 29 0.0016 0.11 12.5 4.4 1 23 579 602 579 602 0.94
16 29 0.0065 0.44 10.5 0.2 1 20 641 660 641 662 0.95
17 29 0.0084 0.56 10.2 2.2 2 23 665 686 664 686 0.97
18 29 0.00012 0.0083 16.0 0.4 1 23 691 713 691 713 0.96
19 29 0.015 1 9.4 5.8 1 23 728 750 728 750 0.97
20 29 1.7e-08 1.2e-06 28.1 1.0 1 23 761 783 761 783 0.98
21 29 9.3e-07 6.2e-05 22.6 2.1 1 23 789 811 789 811 0.97
22 29 0.0031 0.21 11.6 0.1 1 23 817 839 817 839 0.98
23 29 0.0036 0.24 11.3 0.8 1 23 845 867 845 867 0.97
24 29 9e-05 0.006 16.4 1.5 1 23 873 895 873 895 0.99
25 29 7.9e-06 0.00053 19.7 1.3 1 23 901 923 901 923 0.98
26 29 0.45 30 4.7 0.6 2 23 929 949 928 949 0.90
27 29 3.7e-06 0.00025 20.7 2.6 1 23 955 977 955 977 0.98
28 29 2.3e-06 0.00015 21.4 4.0 1 23 983 1005 983 1005 0.98
29 29 3.7e-05 0.0025 17.6 1.3 1 23 1011 1033 1011 1033 0.99

Sequence Information

Coding Sequence
ATGGATGAAATGAAACTTCCAACCGATGAATCGGATTTGGAAACTTACGTCAATGACGAATTCGACGATTACATTTTGAGTGGCGATGAAGAAGAAAATACTGAAAACATGCAGGAATCTTCTCCACAGGATTTCGTTGCTGATTCTCGCCTAGATTTAAAAAATGAAGATGATTTTCTCGATGAAGAAATCGTCACGATAAAATTAGAAGAATCTGTATTCTCATGCATTTTCTGTAATAGAAATTTCGAAAGTGAATTAGATTTGAAAGATCATATCGATACACAAGTGTTAGAATGTGCTCACTGTAAAAAATGGTTCTGTGATAAAATGTTGTACGACCAACATACCCACACGATAGAGGAACCAGAAGGACTCCAGAATGGAGAAGAAAAACCTTCACTCAATAAAAAGACTGAAGTGCGATTTCAAGTTATCGAAACCAAGTTGAAAACTACCAAAAGTTCCACGAGTAAATTAAGCCCTAAAGATAATCATTCATTCATTCCTGAAAAAGCAGTTCGTTTTCAATTAATTGAAACTGCCACGAAAACTTCGGAGTATCTGCCACACAAATCAACGCAAGATCGTACTACTTGTGATGAGGAAACTGGAGCTCAGCTTCAGTTATTCCCAGCAGCATTGAGAATATTCGAATGTAACTATTGTAGCAGAATATTCACAGCTAAAAAAGTGATCGAAGAACACTTGAGAATACATACAGGCGAAAAGCCTTTCCCGTGTATCGAATGTGGCAAAAGCTTCCGTCAAAAATCGCACTACAACACGCACAAAAAAATACATTCCGAAGAAACATACGAATGTCATTACTGTCGCAAACAATATCGTAATAAAAACAGGCTGAAAAGGCACATTTTAGCTCACATCGACGGAAAAAAACACATATGCCAGCACTGCGGTAAAAAGTATCTTTTAGGTTGCTCTTTAGAAAACCATTTACGACGACACACCGGCGAAGGCATGATCATCTGTACACTCTGTAATAAAGAATTCACCACTAAACGCAGAATGGAAAAACATCTGAAGACTCATACATTAGAGAAAAAATTCGCTTGCGATATCTGCGATAAACGATTCGTTAATTCGTACAATTTGAAGCAACACTTTTTAAGACATACTCGAGAGAAGACCAAACGCTGCGAAATCTGCGGTAATAATTACACCGAAGAATATTTTCCAGTCCACATGAGAACGCATACTGGTGAAAAACCTTTCGAATGTTTCGTCTGTGGTAAACGATTCTCCCAAAGCTCCGGTCTATGGGAGCATAGAGTAGTACATGAAAATTCCAAACGCTTTTACTGCGCCTGTGGTAAATATTTCGGTCGCAGTAAGGAACTTAAAAGACACGCCGTTCAGCATACCGGAGTCGGGTTTGTATACTGTAATTACTGCGGTAAAGGTTTCAGCTCCAAATGGCTATTGCAGAATCACGAACGTAAACATACCGGAGAACGACCATTCGTATGTCCAATTTGTAACGCCGGATTCACACAGAAGGCCAATTTATTCGCTCACTTACGAAATCACACCGGAGAAAAGCCTTTCGCGTGTGATACCTGCGGTCGTCGTTTTGCCAGCAAAGCTAAAATGAAGTCTCATACGTTAATTCATACTGGTGAAAAACCATTCGCTTGTTCGCACTGTGGTAAAACGTTCCGCCAAAATACGTCTTTGCAATATCACATAAGGACGCATACTCAGGAAAAAGTCTTCGAGTGTGTTTGCTGTGATATTCGTTTCGTTAGGAAACATTCGTTGATACGACATATGAATAAAACACATGTAGAAGAATGTTATTCTCCTCAAAAAAACGAACTATTGACCGAAGAGGATAAAGATTTTTGCGTCGAAGAAGTCGAGGTGGATGATATGAAGGATATCAAAGTAGAGAGCATATATCAGTGTAGTTTTTGCGAACAGAAGTTCGACTACGAAGAAGACCTTCTTTCGCATTTGGAAGTCTCGGTACAATGCCACATTTGCGAAAAGAATTTTTGTAGTTATTTATTGTATGAATTGCACGTGGCTACTCATAATCCTCAACTTTACAAATGCGAAAAATGTCAAGCTATGTTCAGTAAGGAAGAAAATTTAGAAGCTCATAACAAAGCTCACATTTACGGTGACATCGACGTTGTAAACGAAAATAGATCTTCGCACGAATGTAAGTTGTGTCATTTTACGTTTTTTTCATTGGAAGAACTCAAAGACCATTATAGCAAACATATAAAGAAAAATCGTAGATCTCTCAGGCTCTACGAGTGCGACTATTGCGGTAAATGTTTCACCGATAAAGCAGCCTTGACTAAGCACATATTGATACACACTGGCGAAAAACCATACCAGTGTACGTACTGCGATAAACGTTTCCGACAAAAAGGATATTTAAATTATCACATTGCCAATCACCAAGGCAAGAATAACTTCGAATGCGATGTTTGTGGGGCACATTATACAGCCAAAGCTAGGTTAGTTGATCATATTAAAATTCATATTTATGGCAAACAACATCCTTGTCCGTTCTGTGGTAAACTATTGATGTCACGACAAACGCTACAGGATCATTTGAAAATTCACACTAAAGAAGACCTCTATCAGTGCGATATTTGCAGCAAAACCTACCTATCGATGAACAACCTTCGTAACCATATTCGTAAACATAACAACGAGAAACCCTATTCGTGCGAATATTGCAACAAACGTTTCGTGGAAAAAGGTAACATGAAGCGTCACGTCGAACGACATTTCCAAAGTAAAGTTAAATGCGAACACTGCGACAACGAATTCAGTGCCAGCTACTACCCAATACATTTACGATTGCATACCGGCGAAAAGCCTTACCAATGTAAGTTCTGTGGCAAACGATTCACCCAGTGTGCCGGCTTAAAAGATCATATCGTCACGCATACCGGTGAAAAACCCTACGAATGCAATTTTTGTGGCCGAAAATTTGCCTTCAAATCACACCTTCAAAGGCATCTAACCATGCACACAGGAAAAGGTGCTTATCGGTGCGAGATCTGTGACAAAGCTTTTTTCACCAAAACTCTAATGTTGAATCACAGTAGGATGCATACTGGCGAGAAGCCATTCGAGTGTACAGACTGT
Protein Sequence
MDEMKLPTDESDLETYVNDEFDDYILSGDEEENTENMQESSPQDFVADSRLDLKNEDDFLDEEIVTIKLEESVFSCIFCNRNFESELDLKDHIDTQVLECAHCKKWFCDKMLYDQHTHTIEEPEGLQNGEEKPSLNKKTEVRFQVIETKLKTTKSSTSKLSPKDNHSFIPEKAVRFQLIETATKTSEYLPHKSTQDRTTCDEETGAQLQLFPAALRIFECNYCSRIFTAKKVIEEHLRIHTGEKPFPCIECGKSFRQKSHYNTHKKIHSEETYECHYCRKQYRNKNRLKRHILAHIDGKKHICQHCGKKYLLGCSLENHLRRHTGEGMIICTLCNKEFTTKRRMEKHLKTHTLEKKFACDICDKRFVNSYNLKQHFLRHTREKTKRCEICGNNYTEEYFPVHMRTHTGEKPFECFVCGKRFSQSSGLWEHRVVHENSKRFYCACGKYFGRSKELKRHAVQHTGVGFVYCNYCGKGFSSKWLLQNHERKHTGERPFVCPICNAGFTQKANLFAHLRNHTGEKPFACDTCGRRFASKAKMKSHTLIHTGEKPFACSHCGKTFRQNTSLQYHIRTHTQEKVFECVCCDIRFVRKHSLIRHMNKTHVEECYSPQKNELLTEEDKDFCVEEVEVDDMKDIKVESIYQCSFCEQKFDYEEDLLSHLEVSVQCHICEKNFCSYLLYELHVATHNPQLYKCEKCQAMFSKEENLEAHNKAHIYGDIDVVNENRSSHECKLCHFTFFSLEELKDHYSKHIKKNRRSLRLYECDYCGKCFTDKAALTKHILIHTGEKPYQCTYCDKRFRQKGYLNYHIANHQGKNNFECDVCGAHYTAKARLVDHIKIHIYGKQHPCPFCGKLLMSRQTLQDHLKIHTKEDLYQCDICSKTYLSMNNLRNHIRKHNNEKPYSCEYCNKRFVEKGNMKRHVERHFQSKVKCEHCDNEFSASYYPIHLRLHTGEKPYQCKFCGKRFTQCAGLKDHIVTHTGEKPYECNFCGRKFAFKSHLQRHLTMHTGKGAYRCEICDKAFFTKTLMLNHSRMHTGEKPFECTDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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