Basic Information

Gene Symbol
RERE
Assembly
GCA_009761765.1
Location
chr5:1415207-1427865[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-08 4.1e-05 23.0 0.3 2 45 120 164 119 165 0.84

Sequence Information

Coding Sequence
ATGGGTTCTACTCAAGGAGAAATACGTGTTGGACCGTCCCATCAGGCTAAATTACCGGAAAACAGATTGAACGCTGTAGATTTAAGTCCTGACCCAGAATTTGATAAAGAACGAGAAGAAGTAAGATGGGTTCCAAGTTTAGCCTTAGATGGCGATCTCGTTATGTATTTAAGAGCTGCAAGATCAATGGCCGCATTTGCCGGTATGTGTGATGGTGGTTCCGCCGAAGATGGTTGTATTGCAGCATCGCGAGATGGAACAACTATCAATGCCATGGATGTGTTACATGATTCTGGATATGATCCTGGTAAAGCTTTGCAAGCTTTAGTTAAATGTCCCGTACCTAAAAGTATAGAAAAGAAATGGACTGAAGAAGAAACAAAACGTTTTGTAAAAGGGCTTCGTCAGTTTGGGAAAAATTTCTTTCGCATAAAGAAAGATTTACTTCCTCACAAAGATACGCCTGAACTCGTAGAATTTTATTACTTATGGAAAAAAACTCCAGGTGCCAACAATAACAGACCGCACAGAAGACGACGTCAAGGATCTCTGCGACGAAATCGAAATACGCGAAATACTAGAGGAGGCACACCTAAAGAAGAAGTTTCAAGTAATAGTTCAAGGCCATCGCCTAGTTCCAAAGATCAAGGTGAAGCTAGCTCTGGTAGTGACGATGACAACGATAATTCCTACGATGATTCTGATTCAAGGGAAAACGGAGGATACCGCTGCCAGCATTGCTTTACTACGAGTTCTAGAGATTGGTTGCACGCTCCTAATGGTCCTAAACAAGGAGCTCTGCTGTGTTACAACTGTCGCACGTATTATAAGCAATACGGCGAATTGCCACCTGCGAATAGAAGTGAAACGTATCTTTTCCAACCGGTTCAAAGCGAATCTCCCGAAGGATCTCCTGGCCGTATGAGAACGCGTAATAAGGCTAAAGAAACACCTACTAAGGAGAAGTCTTCAAAATCCAAAAGAAGCGAGGCCGCAACTCCTGAACCCGAGAATGATAAAAAATTCAACAATTCTACCGCCGATTGTAAATCTCCCGGTAGTAATGTTAATTCTCCTAGCGACAAATCAAAGAAAAAGAATAAATCAGAGCCGCAGAATTCTAGCCGTAAACGTACCAATATAATGCAAGCCGAAGGCGAGACGAAACGTAAACGTGAACGCGGTCCTGAAAGTGGTGCATCCGGCGAATCGGATTGCGAATCATTATTAGACGAAGTAGATTCGAATAGTCCAGCACAAAATGTCGAAGAAAAACCAAAGTCGGAAACGCCTGTAGCGCCTCCATTGTTACCAATCGCCGAATTATCGAGGCAGAGCGAAACCGATGTGAAAATCGATAACGCCGCTCCGTCGATCATATTCCCGTCCGGTTCTTCGCCGACGAAGGAGGCCGCATTACCAGACAAATCGCCCATTAATTTGGGTGTAAACGACGAATCCAGCGAAACCAAAAATTTAAACGTCGAATCCAAAGATAGAGAGTACCCATCGGATGGGGAAAACCTTCCGATGGCGTTGAGTAAACCGTACGCCGAGTACGACGCATCCGCCAACTCGGCTGTCAAAAACGAAGGGATATTCGATTCGCCGTCGCCAGACAGAGACGAGATTCTTCCTCCAGTTTTGACCTCCGAAGAAAGCTACGTTCCCAAAGATGAAATGCCTACTTTGCACGCGAGCACAAATTTACCCGATTCGATGACCACCACGTCTTCGTACGCGAACGATATGAACGTCAAGTACTCGACCGGTTACGTTTCCCAGATGGAAGTTTCCGTTGACACGATCAAAATGGAGCCCGGTTTGCAATCGAGTGACGAAAATAGCGCTTCGGAAACGGCCGCTAAACAAAATATGTCCGAATCGATATCACGATCGGAATCACCGACGTCGTACAGGCAAACGTCGTCGCCACCTCCGCCACCGATATCGTATTCTCATATTCCGCCCGAATCGCCTAGGCAGTCGATGGAACATAATCAAGATAAGAGTTTACCTCCGCAATCAGTCATGTTACCCACTTATATCTATAATGAAAATGAACGAAATGATAAGCCGATCAATTCCTCTAATGTACCGCCCGCTTCCATGAACTTGTCGCAACATCATTCGGCGTATGCCCCTTATTATCATTTTCCACCGCATCCTCATGCCGATAAAATGGAACCTTCACCGTATTTAGGCCCCAGCACCTTGCAAATGGAGCCTCAAGATTTGAAAATAAAGCAGGAAGTGATACCACCAGATCAAAGACCGCCGTCTGTAGATCCGCTTCAGTCGTTGAAAGAAGTTAAAGTACCAGGCTACTCAAATACGTCGATCTCGCAACCACTTCTGCCGACTACAACGAGCTCGGCAATTTCGCTGAATGCAATGGAATCGCATTCGGTGGGCAATCGTTCGGATTCCAATTCACCGTATATGTCCGGTCCGCCTAATGAGGATATAAAAAAAGAATCTGAATCGTTTAATTCGACGAGAGTTTCGACACCGTTGAAGTCGCCGAGTTTGAGCTCATCAAAAATGACGATAGATGGTTCGCGAAATGTATCGTTGTCTCCGAAACTATCTCATACGCCGCCTTATCAAGCGGCTCCGTTGACCTCGCAAGCATCGACGCGCACTCCAACCTCGTCTCCGGTGAACACGTCGACGGCCGGTCCGCAAGTGGCGCACGCCGCTCAGCAGTCATCTCCGTTGAATCGCGCGTCACCTGCTCATTTAGCTCATCCGCATCCGTACATGCCTGCGGTGCATCCTCATCAGCACTATTTACAACACTCCTTGTTAGCGGCGGCCGCCGCCGCTCATGCCGCCGCAGTACACCATACGCCATATTCTCATCATCCGTATGCCGGCTATCCGTATCCATTCCCTTACGGAGCGTATCCCATTCCGCAACCGATACCGCCGCCTAGGCCGATAGAGAGTCAGAAACGTGATATGGAGGGAGCCACCACCATGATGACCTCGCATCATTCGTCTTCGTCGTCGTCTTCGGTGACCACGAGATCGCTTCGTGATGAAGATTCGAATACCCATGCGCAAGAGATGACGCAAACCCATCACCACTCTTCGTCGCATCACGCCTCCATTCATCATCATACGGACAAGCAAACGATCTCGCATTCGTCCAGCTCCAGTAGTTCGGCGACGGTACAACATAAGGTCAAAAGGAGTTCTAGTCCGCAGCATTCGTCGTCGACTTGCCACGTATCTGCCACTTTGTCGCAATCCACCTCCTCCTCGGTGTCCACAAATCATGGCCAAAGACCTGGTTCGGTGATACCGCCGACGCATCATTCTGCGCTATCGCTGTCTGGATTACCGCCGCCACCTGCCGGTTCGCTGGAAGCTCTACGAGCGCACGCGCATACCACCGCTAATTTACATTCGCCACTGCAGCTACAACCGTCGCCGCACAGTTTGGGACATGGTGGGTATTTGGGACCTGCGGATATGACTTTGGCGGGCCACGGTGATTTAATAAAATCGGACCCATCATTATTACGATCTAATGACGATTCTTTGTTAGGACCTCCGGACGAAGACGACATACCAAGTCCGACTAATCATATCCCCAAAGGACCATCGCCAGAACCAAAAATCGAAGATAGCGAATGTCATCGCAGTCAGAGTGCGATATTTTTACGTCATTGGAATCGAGGCGATTACAATTCATGCGCTCGCACAGATCTCACGTTTAAACCAGTTCCCGATTCGAAATTAGCTCGTAAAAGGGAAGAACGCATACGAAAACAAGCGGAAAAAGAACGAGAAGAAAGGGAGAAAAATCAAGCGAGAAAAATTACGACTCCTGATAAACCGGAGACGGCGAAGCCTCCGTCTCGTGGTCCAATCGAAACCATTACATCACCTTACGATCGATTCGCTCGTGGCACACCGTACGGGGATACGCCAGCGTTGAGGCAACTTAGCGAGTACGCTAGACCGCATACCGGATTTTCGCCGGTAGCTTTGCAGAGATCTGCTGCTTCGCTCGGGTTACCACCGCAGTGTATTGATCCTATGTTACATTATCAGCTTAACATGTATGGACCTACTCCTCGCGAAAGATTGGAATTAGAGCATTTTGAACGCGAAAAACGTGAACGAGAATTACGCGAATTGAAGGAGAAAGAATTAAACGATCGGCTCAGAGAAGAAATCATGAAATCCGCTGGCTCCAGGATACCAAATCCTATTGATCCCCATTGGTTAGATTTACAGAGAAGATTTAGTACATTAACGCCTGGCGCTCCAGCTTTGCATCCTTTCCAGTTATATGCTGCTGGACAACCTACTAGTTTGACTCCATTAGAAAGAGAACGCTTGGAGAGACTAGGACCGGCGGCCGGAGCTTTGGGCGCCGGTCCTGTTATGGGACCGCCGTCGGTTGCGCAATTAGAAGCGGCGGAACGTTTGGCTTTGGCCACGGATCCTATGCAGTCTCAAGCTCCCCAGCAGTCCACTACTCCCGATAGTCCAGCATTTCCTTTAGCAGGATCTGCTGCCGGACCATATCCGAGGCCTGGTTTAATGCCCACCAGGGAAGCTCCAATGGGCCTACATCATCCATCGGATTTATTAGCTCGTCCTTATGCGGACCAGCTTGTTCATCAGGCCGCTGCTCATGAACATTTACAACGACAAATGCTTATGGAACGTGAAAGGTATTCCCATCCGGCATTAGTAGCTCAACATGAAGAATATTTGAGACAACAACGTGAACGTGAGCTGAAAGTTCGTGCATTAGAGGAAGCCGCCAGAAGACCATAA
Protein Sequence
MGSTQGEIRVGPSHQAKLPENRLNAVDLSPDPEFDKEREEVRWVPSLALDGDLVMYLRAARSMAAFAGMCDGGSAEDGCIAASRDGTTINAMDVLHDSGYDPGKALQALVKCPVPKSIEKKWTEEETKRFVKGLRQFGKNFFRIKKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRNRNTRNTRGGTPKEEVSSNSSRPSPSSKDQGEASSGSDDDNDNSYDDSDSRENGGYRCQHCFTTSSRDWLHAPNGPKQGALLCYNCRTYYKQYGELPPANRSETYLFQPVQSESPEGSPGRMRTRNKAKETPTKEKSSKSKRSEAATPEPENDKKFNNSTADCKSPGSNVNSPSDKSKKKNKSEPQNSSRKRTNIMQAEGETKRKRERGPESGASGESDCESLLDEVDSNSPAQNVEEKPKSETPVAPPLLPIAELSRQSETDVKIDNAAPSIIFPSGSSPTKEAALPDKSPINLGVNDESSETKNLNVESKDREYPSDGENLPMALSKPYAEYDASANSAVKNEGIFDSPSPDRDEILPPVLTSEESYVPKDEMPTLHASTNLPDSMTTTSSYANDMNVKYSTGYVSQMEVSVDTIKMEPGLQSSDENSASETAAKQNMSESISRSESPTSYRQTSSPPPPPISYSHIPPESPRQSMEHNQDKSLPPQSVMLPTYIYNENERNDKPINSSNVPPASMNLSQHHSAYAPYYHFPPHPHADKMEPSPYLGPSTLQMEPQDLKIKQEVIPPDQRPPSVDPLQSLKEVKVPGYSNTSISQPLLPTTTSSAISLNAMESHSVGNRSDSNSPYMSGPPNEDIKKESESFNSTRVSTPLKSPSLSSSKMTIDGSRNVSLSPKLSHTPPYQAAPLTSQASTRTPTSSPVNTSTAGPQVAHAAQQSSPLNRASPAHLAHPHPYMPAVHPHQHYLQHSLLAAAAAAHAAAVHHTPYSHHPYAGYPYPFPYGAYPIPQPIPPPRPIESQKRDMEGATTMMTSHHSSSSSSSVTTRSLRDEDSNTHAQEMTQTHHHSSSHHASIHHHTDKQTISHSSSSSSSATVQHKVKRSSSPQHSSSTCHVSATLSQSTSSSVSTNHGQRPGSVIPPTHHSALSLSGLPPPPAGSLEALRAHAHTTANLHSPLQLQPSPHSLGHGGYLGPADMTLAGHGDLIKSDPSLLRSNDDSLLGPPDEDDIPSPTNHIPKGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCARTDLTFKPVPDSKLARKREERIRKQAEKEREEREKNQARKITTPDKPETAKPPSRGPIETITSPYDRFARGTPYGDTPALRQLSEYARPHTGFSPVALQRSAASLGLPPQCIDPMLHYQLNMYGPTPRERLELEHFEREKRERELRELKEKELNDRLREEIMKSAGSRIPNPIDPHWLDLQRRFSTLTPGAPALHPFQLYAAGQPTSLTPLERERLERLGPAAGALGAGPVMGPPSVAQLEAAERLALATDPMQSQAPQQSTTPDSPAFPLAGSAAGPYPRPGLMPTREAPMGLHHPSDLLARPYADQLVHQAAAHEHLQRQMLMERERYSHPALVAQHEEYLRQQRERELKVRALEEAARRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2