Psol006411.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_009761765.1
- Location
- chr4:1698108-1703721[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-15 2.1e-12 46.3 0.2 3 44 611 652 609 654 0.95 2 2 3.2 4.2e+03 -2.6 0.0 23 40 713 731 712 731 0.91
Sequence Information
- Coding Sequence
- ATGTTATCACTGGAGCCGAAAACTGATGGCGGCCCCAACCTGAAATTTTTCGAATCAGCCGAAACATTGACGTTATTAGAGGGCGTCAGATCATGGCTTCAAAAGAATTACAAAAAGTATATTCAAGCTGATCCTCCTACCAATAAAAGCTTAGCAACTTTGATTGTGCAGCTAATCCAGTTTCAAGAAGATAATCTGGGAAAAAATGTTAGCAAACCTCCATTGACGAGACTGCCGATGAAATGTTTTTTAGATTTCAAACCTGGTGGCGCTCTTTGTCATATTTTAGCGAGCGTGTATAAGTTTAAAAGCGATCAGGGGTGGAGGAGATTCGATTTTCAGAGTCCTTCGAGGATGGACCGAAACATCGAAATGTTCATGAATGTTGAAAAAGCTCTAATCCAAAATAAATGTTTGGTTATGCCTCAAGTTTTTATTCGTCCTGAAGTAAAAAAGAGTGATAGAGAAAAAGTCGAAGATATAATAAAACGCCATCAAGGAACCATTATAGACAGTGAAGATAATGCCACACATATCATATATCCTGCAGTTGATCCGATTGATGAAGAATACGCGAGAGCAGTTTTCCGCAACAAAGAAAGATGGACTTTGTTGCATTGGTATTACTTCCCGGATTCGCATGATTCGTGGGTAAATACCGAAATACCGGTAGACCCTCCGGAAATGCCTCCTTCTTTTAACGTAAATGTGAAATGGAAGGTTACAGCATCGTGGGCTTTGGATTTGGAACGATACAACGAATGGATGTCTGAAGAAGATTATGAAGTGGATGATAACGGTCGTAAAAAAGTACACAAGTTTCGCTTATCTGTGGAGGATTTAATGGCAGCTACGGATCCAGAAAAAACGAAAAAGAAGCAAAAACGTAAGAGATCGCCATCGCCAGATCTACGTAAACAACTTAAAAGAAAGAGCACACGTGGACCTTCAGCTCCTTCCACTCCTTCTATGAGTAGTAAAAAAATGAAAAACGATGACGATAGTAGTACCGATGATTTGACAAAAGATATGGAGGAACCTCTACCAGAACCAAACGTTCAAGAAATTAACGTTTTAAAACTAGCTAATTCGTCTACAACTTCGTCTTCAAAGAAAGATAGCGATACCCAACCAATTAAAAGCGGTACTTTAACTGATCTTGACGAAGAAGTGGAAAAAGGCGAAGACAGTCAAACGGCTAAATTTAACAATGACGTGAATAATCAGGAAACGTCGGCGAAGGATGAAGGTCAAGAAGATAATGTGACTGAACAAACACACCATATTATAATACCCAGTTACGCGGCTTGGTTTGATTACAATTCAATTCACATGATCGAAAAAAGAGCTTTACCGGAGTTTTTCAACGGTAAAAACAAATCGAAAACTCCTGAAATTTACTTAGCGTATCGTAACTTCATGATCGATACGTATCGCTTAAATCCAACGGAATACCTCACTAGTACTGCGTCGCGAAGGAACTTAGCTGGTGATGTTTGCGCAATCATGAGAGTGCACGCATTTCTAGAGCAGTGGGGTTTAATAAATTATCAAGTGGATGCGGATAGTCGACCTACTCCAATGGGGCCTCCTCCTACTTCGCATTTCCATATTTTATCCGATACTCCTTCCGGATTGCAGCCAATTAATCCACCAAAAACTCCTCAACCTTCGGCTGCGAAAACCCTGTTAGATTTAGAAAAACGTACTGATTCGAATTTAAGGAAAAACGAATGCGTCGATAATGCCGCCAATTTTGGACTTCGACTCGACCAGTACGGTAAACGAAGCGGTTTATTGAAAAATAAAGCTGCAGCTGGTTTAACCAGAGATTGGACAGAACAAGAGACTTTACTGCTTTTAGAAGCTTTAGAATTATATAAAGATGATTGGAATAAAGTCTGTGAACACGTCGGTACTCGTACGCAAGACGAATGTATTTTACACTTCTTGAGATTACCAATTGAAGATCCTTACTTGGAAGATTTCGAAACCGGAGGCGCTCTTGGTCCGCTAGCATATCAGCCGATACCGTTCAGTAAAGCTGGTAATCCCATCATGTCCACTGTTGCATTCCTCGCTTCTGTTGTCGATCCAAGAATAGCTTCGACTGCGGCAAAAGCTGCTATGGAAGCATTTGCTGATATCAAAGATGAAGTTCCTGCTTCTTTGATGGATTCGCATATAAAAAATGTTGAAGCGTCCGTTGTAGATGGTAAATTTGATCCAACTGCCGGATTACTCCAGAGTGGTATCGCCGGTACAGAAAAAGAAGAAGATACCGAAAAAGTCAAGAAAGAGGGAGCAGCATCCGAAGAAGTAACTAAAGACAGCGGTACTTCAGAAGCTGAAAAACATTCGGAATCGACAGACGTGAAAACGGAAGAGTCCAACGAAAAATCGCCCAACGAAGAATCTACGCAAGACAACGCCAAGGAAACGGCTGCGGAAAAAAGTGTTGAGGACGGGGAAACAAAAGAGGATAGCGAACGTACAAAATTAATCAAAGACGCCCATTTGCAATCGGCTGCTGCTGCAGCTTTAGCCGCTGCCGCTGTAAAAGCCAAACATTTAGCGGCAGTCGAAGAAAGGAAGATAAAATCTTTGGTTGCGTTATTAGTTGAGACTCAAATGAAAAAATTGGAAATTAAATTACGTCATTTTGAAGAGCTAGAAACGACGATGGAAAAAGAACGCGAAGGATTGGAATACCAAAGGCAACAATTAATTACGGAACGTCAGCAGTTCCATCTCGAACAGCTGAAAGCTGCCGAATTTCGAGCCCGACAACAGGCTCAGCAACGTTTAGCTGCAGAGCAACAATAG
- Protein Sequence
- MLSLEPKTDGGPNLKFFESAETLTLLEGVRSWLQKNYKKYIQADPPTNKSLATLIVQLIQFQEDNLGKNVSKPPLTRLPMKCFLDFKPGGALCHILASVYKFKSDQGWRRFDFQSPSRMDRNIEMFMNVEKALIQNKCLVMPQVFIRPEVKKSDREKVEDIIKRHQGTIIDSEDNATHIIYPAVDPIDEEYARAVFRNKERWTLLHWYYFPDSHDSWVNTEIPVDPPEMPPSFNVNVKWKVTASWALDLERYNEWMSEEDYEVDDNGRKKVHKFRLSVEDLMAATDPEKTKKKQKRKRSPSPDLRKQLKRKSTRGPSAPSTPSMSSKKMKNDDDSSTDDLTKDMEEPLPEPNVQEINVLKLANSSTTSSSKKDSDTQPIKSGTLTDLDEEVEKGEDSQTAKFNNDVNNQETSAKDEGQEDNVTEQTHHIIIPSYAAWFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHILSDTPSGLQPINPPKTPQPSAAKTLLDLEKRTDSNLRKNECVDNAANFGLRLDQYGKRSGLLKNKAAAGLTRDWTEQETLLLLEALELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDFETGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRIASTAAKAAMEAFADIKDEVPASLMDSHIKNVEASVVDGKFDPTAGLLQSGIAGTEKEEDTEKVKKEGAASEEVTKDSGTSEAEKHSESTDVKTEESNEKSPNEESTQDNAKETAAEKSVEDGETKEDSERTKLIKDAHLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAQQRLAAEQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01263299;
- 90% Identity
- -
- 80% Identity
- -