Psol009027.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- Cdc5l
- Assembly
- GCA_009761765.1
- Location
- chr5:27151995-27154888[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-17 4.5e-14 51.7 1.5 2 46 9 54 8 54 0.97 2 2 7.9e-13 1e-09 37.7 0.2 1 46 60 104 60 104 0.95
Sequence Information
- Coding Sequence
- ATGGGAAGAGTAATGATAAAAGGAGGTGTTTGGCGTAACACAGAGGATGAAATTTTGAAAGCGGCTGTGATGAAATATGGCAAAAACCAATGGTCTCGAATTGCTTCTCTATTGCATAGAAAATCTGCCAAACAATGTAAAGCTCGTTGGTTCGAGTGGCTTGATCCTAGTATCAAGAAAACAGAATGGAGTCGCGAAGAAGATGAGAAATTACTTCACATGGCCAAATTAATGCCAACCCAATGGCGTACTATTTCTCAAATCATCGGGCGTACTGCTGCTCAGTGTTTGGAACGATACGAAACACTGCTAGACTTAGCCCAAAAAAAAGAAGATGGAGAAACTGGCGAAGATCCTCGTAAATTAAAGCCCGGAGAAATCGATCCCAATCCTGAAACAAAACCAGCTCGTCCAGATCCAAAAGATATGGACGAAGATGAATTGGAGATGTTATCCGAAGCTAGGGCTCGTTTAGCTAACACTCAGGGCAAAAAAGCAAAACGTAAAGCTCGTGAGAAGCAGTTAGAAGAAGCAAGACGTCTGGCAGCGTTGCAAAAACGTAGAGAATTGCGTGCGGCTGGTATTCATACTTTTAACCGTAACAGAAGAAAACGAGGAATTGATTATAATAGAGAAATTCCATTTGAGAAAAAACCAGCTCCCGGATTCTACGATACTTCCGAAGAAGTTGTGGACCCTTTTGCTCCTAATTTTAAAAGATTACGACGACAAAATTTGGAAGGTGAAATGCGATCTGAAATCGAAGAAGAACTCGAATTCAAAAGACGTTCTCAAGTCATTCAACGAAGCCTACCTCGTCCTAACGATATTACCATTCCATTGAGATCTATCAAAAGTGAATCCAATCTGTCCGATTTACAAAAAGCTGAAGAATTAATCAAAGAAGAAATGATTAAAATGTTACACTACGATGCTCTTCACGACCCCATTCCAGGTGATAGTATGACCCCGCAGCAACATTCTGCGTATCTAGAAAAACATCCTTACGAACGATTCAATGATGAAGATTTAGAAAATGCCAAAGAATTATTAAGAAAAGAAATGGACGTAGTTAAGCACGGAATGAATCACGGTGATTTGTCGCTAGACGCGTACACGCAAGTTTGGGAAGAATGCTTAGAACAAGTACTTTATTTACCGAGTCAAGGCAGATATACAAGAGCCAGTTTAGCCAGCAAAAAAGAACGTCTAGAGTCTTTAGAAAAGAAGTTAGAACAGAATAGAAATCATATGTCTAAAGAAGCCAAACGAGCTGCTAAATTGGAACGCAAACTACGAGTACTCCTTGGTGGTTACCAGTCGAAAGCTCAAGTTTTGACCAAACAATTTAACGAAATTCAGGACCAAATTGAAAAAGCGTGTATAGAGTTGTCCACTTTCCGGCATCTGCAACAACACGAAGATTTTGCTATCCCGAGAAGAATACAGGCACTGGAACAAGACGTGAAGAAACAAATGGAAAGAGAAGCCGAACTACAGAAGAAGTACTCGGAGTTGAGTCAACAACTTCAGGAATTAGAAACTTCTTGA
- Protein Sequence
- MGRVMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHMAKLMPTQWRTISQIIGRTAAQCLERYETLLDLAQKKEDGETGEDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIHTFNRNRRKRGIDYNREIPFEKKPAPGFYDTSEEVVDPFAPNFKRLRRQNLEGEMRSEIEEELEFKRRSQVIQRSLPRPNDITIPLRSIKSESNLSDLQKAEELIKEEMIKMLHYDALHDPIPGDSMTPQQHSAYLEKHPYERFNDEDLENAKELLRKEMDVVKHGMNHGDLSLDAYTQVWEECLEQVLYLPSQGRYTRASLASKKERLESLEKKLEQNRNHMSKEAKRAAKLERKLRVLLGGYQSKAQVLTKQFNEIQDQIEKACIELSTFRHLQQHEDFAIPRRIQALEQDVKKQMEREAELQKKYSELSQQLQELETS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -