Psol000742.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- -
- Assembly
- GCA_009761765.1
- Location
- chr1:18690422-18692302[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-09 1.7e-06 27.0 0.0 3 41 14 52 12 54 0.91 2 2 4.4 2.7e+03 -2.4 0.0 33 45 126 138 126 138 0.90
Sequence Information
- Coding Sequence
- ATGGCTGATAAAGATAGAAAACGAAGTACATGGAAAAGTGACGATTTACATTTTGCAATTAAAGCTGTAAGGGATGGAAAAAAGAAGATATCTACCGCAAGCAAAGAGTATGGCATTCCTCGGAGAACATTGAGAGATTATCTTCAACGAAATCCAGTACAGGCAGATGGTAATCAAAATATTTTAAAACAAAAAATGGGTCGAAAAGCCACATTAACCGCTGATCAAGAAAATGAAGTCGTACGTAGAGTTTTACGTTTATCAGATTTAGGTTTTCCAATAACATCCAAAATTCTACAAACTTCGGTATACGCTTACTGCGAAAGGAATGCCATTAAACACCAATTTACAAAAGGTATCGCTGGTAAAGATTGGTTATACGAGTTTTTACAAAGGCACCCAGATGTATCGCGTAAACGCGCACAAAATTTAAACGAGGCAAGAGCGCAAAAATTAAACAAATTTGTTGTGAACGACTTCTTTGAAAAATTAGAAGCACTAATGAAAGAAGGAGATTTTTTCAATCATCCTGAGCGCATATTCAATATTGATGAAAAGGGTTTACATTTATGCCTTCACAAATCACCATTAGTTCTTGCTAAAAAAGGATCAAAACGAGTAAGGATTCGTGGGAAAGAACATGGAGAAAATGTAACATGTGTAGCATGTGTCAGTGCAATTGGATCCTCCATACCCCCTTACATTATATTCAAGGGGAAAAATAAGAAAAAAGAATGGGGCGACGATTTGCCTCCAGGTTCTGACATAGCTATGTCACTAAAAGGCAGCATGACGACATCAATCTTCGTTGAATGGCTTGATCACTTCGCCAAATATAAGCCAGCCGGAAAATGTTTGATTGTGATAGATGGCGCTAAATGTCATATTGATGAAAGTATTGCGGCCAAAGCTGAAACTATTGATGTTACCTTATTTTGTCTTCCCAGCAATACCACACACGAGTTACAACCTCTTGATAAATCGGTGTTTAAACCTTTAGAAACCTTCTGGGATCAAAATGTGATGAAATTTTGGAGAGGCCAAAGCGGAAATTATGACACCACAATTTCAAAATACCGTTTCGCGAAAATATTCACTCCATCATGGTTGCAGGCGGCAACTCCCAAGAATATTGTTGCTGGATTTAGTAGTTGTGGAATATACCCTCTTGATCCTTCTAAAATTCCAGAAGAAGCTTTCGCACCTAGTACAGTAACGGAGTCCAACGATCTTTCCCCCCCTATCACGAATGGGATAGAAACCAACCATTCAACACAATCTGTTTCAACTCCATCAAAATCGAATGATCTTTCCCTTCCTGTTACAAGTAGGATAGAAACCAACAATTCAGCACAATCTTTTTCAAATCCATCAAGTGGAAGTTCAACCACAATGAAAGAAATTTTGAGCACTCCTTCAGTGAAGGCCCCTAAACGGAGCACAAGGAAAGCAATAAACTCCAGGGCAGTAGTGGTTAACAAAGCACTTTTCCATAATGATGAAAGTGACGCCAATAGTAACTTAGATTCAGAAAGTGATTTTGATTGGCTAGATTCGCCGCCACCAAAACCAGAACGAACATTCAAAAAAAAATTGGCCGAGAAATTGAAAAATCTGCCAAATATTGCCAAAAATCATAAAAAAATTTCGGCTAAAAAAACGTCGATGACCTCAAAAAAAACACTGAAGAAACCCGTTCAAAAGTTACTGGTAAAGTCTTCAACAACTTCGACGCAATCGTGGTTCTGTCATTTGTGCCAAGCTGATGAAATAAGAGATATGCGGCTATGTTCAAAATGCAAAAAATACTTTCATGATGATTGCATGGGTCTAACCCAAGATGATTCAGAAACTGAGTGTAACTATTGTTTAAATGAATAA
- Protein Sequence
- MADKDRKRSTWKSDDLHFAIKAVRDGKKKISTASKEYGIPRRTLRDYLQRNPVQADGNQNILKQKMGRKATLTADQENEVVRRVLRLSDLGFPITSKILQTSVYAYCERNAIKHQFTKGIAGKDWLYEFLQRHPDVSRKRAQNLNEARAQKLNKFVVNDFFEKLEALMKEGDFFNHPERIFNIDEKGLHLCLHKSPLVLAKKGSKRVRIRGKEHGENVTCVACVSAIGSSIPPYIIFKGKNKKKEWGDDLPPGSDIAMSLKGSMTTSIFVEWLDHFAKYKPAGKCLIVIDGAKCHIDESIAAKAETIDVTLFCLPSNTTHELQPLDKSVFKPLETFWDQNVMKFWRGQSGNYDTTISKYRFAKIFTPSWLQAATPKNIVAGFSSCGIYPLDPSKIPEEAFAPSTVTESNDLSPPITNGIETNHSTQSVSTPSKSNDLSLPVTSRIETNNSAQSFSNPSSGSSTTMKEILSTPSVKAPKRSTRKAINSRAVVVNKALFHNDESDANSNLDSESDFDWLDSPPPKPERTFKKKLAEKLKNLPNIAKNHKKISAKKTSMTSKKTLKKPVQKLLVKSSTTSTQSWFCHLCQADEIRDMRLCSKCKKYFHDDCMGLTQDDSETECNYCLNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -